5 minutes ago by
carlopecoraro2
★
2.5k
0
votes
0
replies
6
views
0
votes
2
replies
96
views
0
votes
0
replies
21
views
0
votes
1
reply
37
views
0
votes
1
reply
53
views
0
votes
0
replies
19
views
2
votes
4
replies
187
views
3
votes
3
replies
74
views
1
vote
2
replies
68
views
updated 2 hours ago by
GenoMax
142k
•
written 3 hours ago by
Gabriel R.
★
2.9k
0
votes
3
replies
175
views
0
votes
5
replies
159
views
updated 3 hours ago by
ATpoint
82k
•
written 6 hours ago by
manuelmourato25
•
0
3
votes
4
replies
283
views
797
votes
167
replies
143k
views
109 follow
updated 3 months ago by
Biostar
2.8k
•
written 7.4 years ago by
Istvan Albert
100k
1
vote
8
replies
425
views
0
votes
0
replies
48
views
7 hours ago by
mirwa.zidi93
•
0
0
votes
0
replies
45
views
0
votes
0
replies
52
views
9 hours ago by
ebertomeup
•
0
0
votes
1
reply
92
views
updated 9 hours ago by
Pierre Lindenbaum
161k
•
written 10 hours ago by
saifulislam99121
•
0
0
votes
4
replies
171
views
0
votes
1
reply
510
views
updated 12 hours ago by
valdirbarth
▴
20
•
written 12 months ago by
Salomé
•
0
0
votes
0
replies
59
views
1
vote
0
replies
70
views
0
votes
0
replies
56
views
1
vote
3
replies
153
views
0
votes
2
replies
123
views
9 hours ago by
mavy
▴
10
1
vote
1
reply
179
views
19 hours ago by
ramiro.barrantes
•
0
1
vote
3
replies
204
views
updated 2 hours ago by
marco.barr
▴
120
•
written 1 day ago by
diqixiaoyaoer
▴
10
2
votes
6
replies
1.9k
views
0
votes
1
reply
112
views
0
votes
0
replies
72
views
1
vote
5
replies
760
views
written 6 months ago by
Daniel
▴
30
0
votes
0
replies
71
views
updated 22 hours ago by
GenoMax
142k
•
written 22 hours ago by
Rodolfo Adrián
•
0
1
vote
3
replies
160
views
updated 22 hours ago by
Zhenyu Zhang
★
1.2k
•
written 23 hours ago by
shpak.max
▴
50
2
votes
4
replies
158
views
3 minutes ago by
ev97
▴
20
0
votes
10
replies
309
views
updated just now by
GenoMax
142k
•
written 1 day ago by
hophuquy0944
•
0
0
votes
4
replies
200
views
13 hours ago by
LucisTheFather
•
0
0
votes
1
reply
109
views
1 day ago by
asalimih
▴
60
0
votes
0
replies
81
views
2
votes
2
replies
150
views
updated 1 hour ago by
Ram
43k
•
written 1 day ago by
jsmith120f
•
0
2
votes
2
replies
168
views
1
vote
5
replies
190
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
biology_inform
▴
50
1
vote
4
replies
258
views
0
votes
1
reply
125
views
updated 5 hours ago by
Papyrus
★
2.9k
•
written 1 day ago by
yura.grabovska
▴
90
0
votes
1
reply
104
views
0
votes
4
replies
228
views
1
vote
5
replies
209
views
1 hour ago by
kl
▴
10
0
votes
9
replies
325
views
10 hours ago by
njornet
▴
20
0
votes
3
replies
143
views
3
votes
3
replies
207
views
1
vote
1
reply
208
views
Recent Votes
Recent Locations •
All
Estonia, just now
China, just now
Italy, 1 minute ago
Spain, 2 minutes ago
United States, 2 minutes ago
Malta, 4 minutes ago
Finland, 5 minutes ago
Recent Awards •
All
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
ben@f
▴
20
Popular Question to
Jalil Sharif
▴
80
Popular Question to
biology_inform
▴
50
Recent Replies
Comment: Can 5' and 3' scRNAseq be processed with the same pipeline?
by
ev97
▴
20
Noted! Thanks very much for your help!
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
hophuquy0944
•
0
i'm using linux. I was use 3 file.fasta to debug and it is nucleotide file, and my blast -h still work
> (/data/quyho/tools/mgs2amr_tool…
Answer: Details on salmon index
by
Rob
6.5k
Hi Lorenzo,
Thanks for your question. First, I'd like to clarify that several substantial updates have been made to salmon since its …
Comment: Can 5' and 3' scRNAseq be processed with the same pipeline?
by
yura.grabovska
▴
90
sc/snRNASeq tends to have differences in things like mitochondrial genes etc, which you can account for using tools like SCTransform but in…
Comment: Why does assigning genes with biomart give me different values than using a tran
by
bioinfo
▴
150
Thank you! I ended up using the transcripts_to_genes instead of biomart.
Comment: How can I calculate the OS of each patient?
by
ATpoint
82k
Please be specific. Which TCGA subset, what did you try? Show code.
Answer: mitochondrial genome assembly pipeline
by
shelkmike
★
1.2k
A good tool for mitochondrial genome assembly is GetOrganelle (https://github.com/Kinggerm/GetOrganelle)
Comment: getting exon coordinates
by
Ram
43k
Please do not use `bioinformatics` as a tag unless your post in about the field of bioinformatics itself.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
Ram
43k
I've removed unneccessary tags - `meta` and `how-to` don't apply to this post at all, and the `forum` tag is not in use anymore.
Comment: Difference in number of reads when using duplex and simplex base calling with Do
by
GenoMax
142k
I assume you have posted this in nanopore community and/or on the dorado issues page on GitHub. Please come back and post an update once yo…
Comment: Annotating file using bcftools
by
kl
▴
10
Do you know if there is a way to leave chr:pos in ID if there is no matching rsid based on chromosome and position, as variants have been r…
Answer: Would you bother re-mapping RNA-seq data from an old GRCh38 build to a newer ver
by
Jeremy Leipzig
22k
We get this question like clockwork every 6 weeks.
I'll say it one more time:
**A freeze is a freeze.**
Patches are not a thing th…
Comment: Can 5' and 3' scRNAseq be processed with the same pipeline?
by
ev97
▴
20
Thanks very much for your feedback! I will take all those things in consideration once I start the analysis!
Just out of curiosity, do yo…
Answer: getting exon coordinates
by
ben@f
▴
20
A combination of bash and awk can do the work, suppose you have the gff file annotation of your gene of interest
and a text file with Gene…
Comment: getting exon coordinates
by
Pierre Lindenbaum
161k
https://www.biostars.org/p/385786/ ; <br> https://www.biostars.org/p/276608/ ; <br> https://www.biostars.org/p/411934/ ;etc...
<!--
How …
Traffic: 2838 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6