0
votes
1
reply
14
views
0
votes
0
replies
18
views
0
votes
1
reply
58
views
updated 1 hour ago by
Mensur Dlakic
★
27k
•
written 4 hours ago by
singlecell_bio
•
0
0
votes
0
replies
30
views
4 hours ago by
RD
▴
10
801
votes
167
replies
144k
views
109 follow
updated 4 months ago by
Biostar
2.8k
•
written 7.5 years ago by
Istvan Albert
100k
1
vote
5
replies
200
views
updated 5 hours ago by
Ram
44k
•
written 11 hours ago by
charms.charms
•
0
3
votes
2
replies
621
views
updated 16 days ago by
aw7
▴
320
•
written 5 weeks ago by
abhishekghadge
▴
20
1
vote
7
replies
216
views
updated 4 hours ago by
Istvan Albert
100k
•
written 8 hours ago by
balajir24.smc
•
0
1
vote
1
reply
95
views
0
votes
1
reply
81
views
0
votes
2
replies
103
views
updated 10 hours ago by
pairedttest
▴
10
•
written 11 hours ago by
Darren
•
0
0
votes
1
reply
176
views
updated 10 hours ago by
glenn.hickey
▴
520
•
written 4 weeks ago by
aliraza3119
•
0
2
votes
4
replies
2.0k
views
updated 9 hours ago by
Istvan Albert
100k
•
written 3.2 years ago by
torkel.loman
▴
10
0
votes
0
replies
55
views
11 hours ago by
kidpopaye
•
0
1
vote
1
reply
122
views
5 hours ago by
SlowSD
•
0
5
votes
9
replies
334
views
4
votes
2
replies
104
views
2
votes
5
replies
273
views
0
votes
2
replies
95
views
0
votes
4
replies
120
views
0
votes
1
reply
68
views
updated 12 hours ago by
GenoMax
142k
•
written 13 hours ago by
emma.vankerckhove
•
0
0
votes
0
replies
60
views
4
votes
1
reply
95
views
updated 14 hours ago by
Philipp Bayer
8.5k
•
written 14 hours ago by
analyst
▴
50
5
votes
8
replies
370
views
updated 13 hours ago by
ATpoint
83k
•
written 2 days ago by
Assa Yeroslaviz
★
1.9k
3
votes
3
replies
184
views
updated 15 hours ago by
carlopecoraro2
★
2.5k
•
written 17 hours ago by
zahrakhanyousufzai5
•
0
1
vote
5
replies
189
views
updated 14 hours ago by
GenoMax
142k
•
written 16 hours ago by
giulia.trauzzi
▴
10
0
votes
5
replies
202
views
0
votes
0
replies
65
views
20 hours ago by
smilewang997700
•
0
4
votes
12
replies
981
views
6 follow
updated 20 hours ago by
Gordon Smyth
★
7.2k
•
written 14 days ago by
egascon
•
0
0
votes
1
reply
103
views
7
votes
12
replies
368
views
3
votes
1
reply
120
views
updated 1 day ago by
Jeremy Leipzig
22k
•
written 1 day ago by
avelarbio46
▴
30
4
votes
3
replies
238
views
0
votes
0
replies
76
views
1
vote
0
replies
97
views
0
votes
0
replies
80
views
0
votes
1
reply
139
views
1
vote
2
replies
174
views
0
votes
4
replies
729
views
updated 1 day ago by
Papyrus
★
2.9k
•
written 6 months ago by
christine.a.pedersen
▴
10
3
votes
7
replies
318
views
0
votes
1
reply
195
views
2
votes
1
reply
174
views
1
vote
9
replies
423
views
0
votes
0
replies
92
views
3
votes
7
replies
486
views
1
vote
2
replies
190
views
1 day ago by
ashaneev07
▴
20
2
votes
2
replies
383
views
updated 1 day ago by
Nat.Nataren
▴
30
•
written 5 weeks ago by
Gerard
•
0
0
votes
0
replies
97
views
0
votes
5
replies
268
views
2
votes
2
replies
153
views
Recent Votes
Recent Locations •
All
606/76/4, Quốc lộ 13, P.Hiệp Bình Phước, Q.Thủ Đức, TP.HCM, 2 minutes ago
United States, 4 minutes ago
United States, 5 minutes ago
United States, 12 minutes ago
Adelaide, 16 minutes ago
Japan, 18 minutes ago
China, 21 minutes ago
Recent Awards •
All
Teacher to
Philipp Bayer
8.5k
Popular Question to
singlecell_bio
•
0
Popular Question to
Hyper_Odin
▴
310
Commentator to
Jeremy Leipzig
22k
Commentator to
ATpoint
83k
Popular Question to
sorrymouse
▴
120
Teacher to
jared.andrews07
★
17k
Recent Replies
Comment: Set the same Y scale for different plots
by
LauferVA
4.2k
good point.
OK, I have emended my answer above. Thoughts?
Comment: Integrate Chipseq and Atacseq data?
by
Ram
44k
RD, do not delete posts that have received feedback.
Comment: RNA-seq differentially expressed genes (DEGs) with low fold change values
by
Mensur Dlakic
★
27k
There is a good number of DEGs in the top plot beyond abs(log2FC) > 1. The shape of that plot generally looks better save for the compressi…
Comment: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
by
Istvan Albert
100k
> requiring that all DNA sequence data be released in publicly accessible databases within twenty-four hours after generation
The above is…
Comment: Creating a Seurat object with Vissium public available data
by
Ram
44k
> Vissium
It's Visium with just one s. I've fixed your post.
Comment: 2 PhD Students in single-cell bioinformatics
by
mtabaka
▴
20
Thank you for your interest in joining our team. To apply use the online registration form from this site https://warsaw4phd.eu/en/admissio…
Comment: Best practices in Fungal Genome Assembly
by
samuel.a.odonnell
▴
540
You can check stats if it helps with the polishing. You can also look at medaka for nanopore long-read polishing too.
Generally pipelines p…
Comment: Filtering reads that map to both references
by
Trivas
★
1.8k
I've had a similar question on the forum and there's some additional advice here https://www.biostars.org/p/9588074/
Answer: Creating a Seurat object with Vissium public available data
by
bk11
★
2.5k
You can download dataset of GSE188257 from [here][1]. Here I m showing how to create a Seurat object for 1 dataset. You can follow the same…
Comment: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
by
Mensur Dlakic
★
27k
> If you manage to publish something using existing data, you are rewarding the original creators of the data with a citation.
I don't thi…
Comment: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
by
Mensur Dlakic
★
27k
I would definitely let the original authors know once the paper is ready for submission. I would even send them a preprint and ask for comm…
Answer: Using samtools with GCS (google cloud storage) on a docker container seems to gi
by
abhishekghadge
▴
20
export GOOGLE_APPLICATION_CREDENTIALS="./credentials.json"
export GCS_OAUTH_TOKEN=$(gcloud auth print-access-token)
gcl…
Comment: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
by
GenoMax
142k
> I don't think there are any tacit rights, "first dibs," or ethical concerns.
Legally perhaps not but this has been the accepted princip…
Comment: Can I assemble chloroplast genome of plants using SRA data from NCBI and I can p
by
Istvan Albert
100k
I don't think there are any tacit rights, "*first dibs*," or ethical concerns. In my view there is also absolutely no requirement to let so…
Traffic: 1541 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6