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1,000 results • Page
2 of 20
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Votes
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3
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3
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907
views
Forum:
Importance of Data Structures for Bioinformatics?
data-structures
updated 7 months ago by
Ram
43k • written 7 months ago by
S
• 0
19
votes
14
replies
2.1k
views
Forum:
What is the amount of sequencing data produced annually?
data
research
sequencing
updated 7 months ago by
Jeremy Leipzig
22k • written 7 months ago by
vincenthus
▴ 70
19
votes
10
replies
1.5k
views
Forum:
Pain points using commercial clouds
gpt
tinybio
updated 7 months ago by
vincenthus
▴ 70 • written 7 months ago by
Sasha
▴ 840
9
votes
6
replies
1.9k
views
6 follow
Forum:
GTF files from Ensembl Releases 105 and 106 unsorted
Ensembl
bug
GTF
updated 7 months ago by
ATpoint
82k • written 17 months ago by
dlaehnemann
▴ 30
3
votes
2
replies
619
views
Forum:
How to contribute to the next edition of Biostars Handbook
handbook
updated 7 months ago by
Ram
43k • written 7 months ago by
Fouad
▴ 20
3
votes
6
replies
1.4k
views
6 follow
Forum:
Is Bioinformatics a Professional Degree?
career
degree
7 months ago by
anasjamshed
▴ 120
2
votes
5
replies
948
views
6 follow
Forum:
Biostar as a next generation version
meta
mobile-app
updated 6 months ago by
Ram
43k • written 8 months ago by
rj.rezwan
• 0
2
votes
9
replies
1.2k
views
Forum:
open source projects looking for contributors
open-source
updated 7 months ago by
vincenthus
▴ 70 • written 8 months ago by
claudiofr
▴ 20
0
votes
0
replies
536
views
Forum:
Recruiters: what do you expect on a junior bioinformatician?
career
skills
updated 8 months ago by
Ram
43k • written 8 months ago by
gallardodiazmiriam
▴ 20
3
votes
4
replies
1.4k
views
Forum:
Discussion: Uploading terabytes of data to NCBI SRA
NCBI
WGS
archiving
servers
remote
updated 8 months ago by
GenoMax
141k • written 8 months ago by
James Reeve
▴ 130
0
votes
0
replies
568
views
Forum:
I have a Master's and little experience in Bioinformatics - what would be the next best step?
career
updated 8 months ago by
Ram
43k • written 8 months ago by
RM123
▴ 10
1
vote
3
replies
773
views
Forum:
Spaceranger missing spatial coordinates [Discussion]
Visium
updated 8 months ago by
GenoMax
141k • written 8 months ago by
morovatunc
▴ 550
11
votes
8
replies
1.4k
views
6 follow
Forum:
How to write a review article in bioinformatics
article
review
updated 7 months ago by
Ram
43k • written 8 months ago by
joey
▴ 10
364
votes
58
replies
69k
views
44 follow
Forum:
Recommend Your Favorite Bioinformatics Books
education
books
updated 6 months ago by
Ram
43k • written 14.2 years ago by
Istvan Albert
100k
1
vote
2
replies
18k
views
Forum:
Would you rather analyze a dataset with a strong, non-collinear batch effect, or a weak, collinear batch effect.
collinear
latent
batch-effect
variable
GLM
9 months ago by
LauferVA
4.2k
0
votes
3
replies
3.8k
views
10 follow
Forum:
Discussion question: Cutoff for SNP phylogeny
Phylogenetics
SNP
written 17 months ago by
SushiRoll
▴ 120
2
votes
3
replies
787
views
Forum:
Purely analytic or in silico manuscripts that have significantly improved biological understanding
dry-lab
updated 9 months ago by
GenoMax
141k • written 9 months ago by
LauferVA
4.2k
0
votes
2
replies
1.3k
views
Forum:
[Detailed Question] How to Normalize of Metagenomics Gene Abundances (with HMMs models)
normalization
updated 10 months ago by
Asaf
10k • written 10 months ago by
Davide
• 0
33
votes
23
replies
4.1k
views
8 follow
Forum:
Is there a file format better suited for the era of pangenomics than the .vcf? What are its attributes?
VCF
file-format
genomics
updated 10 months ago by
Jeremy Leipzig
22k • written 10 months ago by
LauferVA
4.2k
7
votes
8
replies
1.9k
views
Forum:
Would solving many Rosalind problems show your ability for this field in job-wise?
rosalind
career
10 months ago by
K
• 0
2
votes
3
replies
862
views
Forum:
Mapping a predicted sequence to a genome
predicted
map
alignment
sequence
updated 10 months ago by
Mensur Dlakic
★ 27k • written 10 months ago by
Andy
• 0
0
votes
0
replies
442
views
Forum:
Recommendation sought for differential exon usage of a single gene
splicing
differential-exon-usage
updated 10 months ago by
Ram
43k • written 10 months ago by
nick_b55
▴ 10
7
votes
4
replies
1.1k
views
Forum:
[Meta] Use of AI
AI
Artificial-Intelligence
meta
ChatGPT
updated 10 months ago by
Ram
43k • written 10 months ago by
LauferVA
4.2k
2
votes
2
replies
598
views
Forum:
Colleges
Colleges
india
universities
updated 11 months ago by
Ram
43k • written 11 months ago by
mahimanepalli36
• 0
19
votes
15
replies
2.0k
views
6 follow
Forum:
Cross out line in Biostars
meta
updated 11 months ago by
Ram
43k • written 5.9 years ago by
Bastien Hervé
5.3k
121
votes
33
replies
39k
views
24 follow
Forum:
Where To Look For Quality Bioinformatics Short Courses And Workshops?
Courses
updated 11 months ago by
carlopecoraro2
★ 2.5k • written 10.7 years ago by
Eric Normandeau
11k
103
votes
42
replies
31k
views
34 follow
Forum:
List of cloud genomics companies
cloud-genomics
updated 17 days ago by
Jeremy Leipzig
22k • written 10.5 years ago by
14134125465346445
★ 3.6k
26
votes
12
replies
7.5k
views
6 follow
Forum:
Mapping God Found ‘Scientifically Dishonest’ By Anonymous Peer Reviewers
ngs
updated 11 months ago by
zyan2005
▴ 10 • written 10.5 years ago by
johnblue81
▴ 50
0
votes
2
replies
769
views
Forum:
How to start in bioinformatics?
career
updated 11 months ago by
Ram
43k • written 12 months ago by
caffrey
• 0
4
votes
5
replies
1.4k
views
Forum:
I'm looking for a mentor in Bioinformatics
mentor
teaching
updated 10 weeks ago by
alva
• 0 • written 12 months ago by
cwaingartentrabajo
• 0
12
votes
5
replies
2.0k
views
6 follow
Forum:
Bioinformatics opportunities in Europe?
career
updated 12 months ago by
alwayshope
▴ 40 • written 12 months ago by
melaniem
• 0
19
votes
14
replies
2.0k
views
7 follow
Forum:
What's the general view on point & click bioinformatics for routine analyses?
ngs
RNA-Seq
next-gen-sequencing
12 months ago by
Simon
▴ 40
0
votes
0
replies
7.0k
views
Forum:
Optimal approach for variant calling with 3 diluted germline sample in one sequencing - Capture Sequencing
germline
Calling
Variant
Capture
Sequencing
12 months ago by
Alexandre Eeckhoutte
• 0
11
votes
11
replies
1.9k
views
7 follow
Forum:
Any tips in landing a bioinformatic job?
Spain
R
updated 12 months ago by
LauferVA
4.2k • written 13 months ago by
Jorge
▴ 30
4
votes
2
replies
696
views
Forum:
advice on course selection for a bioinformatics career.
career
updated 13 months ago by
Istvan Albert
100k • written 13 months ago by
Aaron
• 0
0
votes
1
reply
535
views
Forum:
Graduate in molecular biology and genetics
biology
genetics
Molecular
updated 13 months ago by
GenoMax
141k • written 13 months ago by
zamzammahmud20
• 0
4
votes
1
reply
787
views
Forum:
Open problems in genomics 2023
genomics
pangenomics
updated 13 months ago by
GenoMax
141k • written 13 months ago by
colindaven
6.4k
5
votes
3
replies
921
views
Forum:
Someone posted the same question to StackOverflow and Biostars. The results will blow your mind.
meta
updated 13 months ago by
Joe
21k • written 13 months ago by
Cornelius
▴ 70
1
vote
0
replies
471
views
Forum:
Penetrance versus heritability
penetrance
heritability
13 months ago by
tacrolimus
▴ 140
10
votes
15
replies
2.1k
views
Forum:
How should reference genome fasta files be distributed by UCSC?
reference-genome
fasta
freeze
ucsc-genome-browser
updated 10 months ago by
Jeremy Leipzig
22k • written 14 months ago by
Maximilian Haeussler
★ 1.6k
8
votes
4
replies
974
views
Forum:
Implementing FAIR data principles to a bioinformatics lab
data
updated 14 months ago by
Jeremy Leipzig
22k • written 14 months ago by
pixie@bioinfo
★ 1.5k
0
votes
0
replies
453
views
Forum:
NGSrich - hg38
Coverage
NGSrich
14 months ago by
RK
• 0
5
votes
5
replies
2.2k
views
Forum:
Bioinformatics - how to start?
molecular-biology
updated 14 months ago by
Mensur Dlakic
★ 27k • written 14 months ago by
Abigail
• 0
8
votes
8
replies
1.8k
views
7 follow
Forum:
A Computer Scientist who wants to start Bioinformatics
computer-science
books
resources
ngs
updated 15 months ago by
omaridris5315
▴ 10 • written 16 months ago by
bjorn
• 0
7
votes
3
replies
1.1k
views
Forum:
Find a research paper for reproducing the results
research
paper
updated 15 months ago by
GenoMax
141k • written 15 months ago by
grant.hovhannisyan
★ 2.6k
1
vote
1
reply
789
views
Forum:
Gene ontology vs Gene set enrichment
set
enrichment
GSEA
ontology
Gene
analysis
gene
updated 16 months ago by
DareDevil
★ 4.3k • written 16 months ago by
Emmykyz
• 0
6
votes
12
replies
2.1k
views
Forum:
How to decide when to have local hardware vs cloud computing?
hardware
computational-resources
cloud
16 months ago by
Lluís R.
★ 1.2k
15
votes
11
replies
2.7k
views
7 follow
Forum:
BioStars and ChatGPT
ChatGPT
Meta
GPT
updated 12 months ago by
ponganta
▴ 590 • written 16 months ago by
Jack Tierney
▴ 350
18
votes
10
replies
2.5k
views
7 follow
Forum:
Add artificial intelligence training related disclaimers to your profile
licensing
AI
updated 16 months ago by
Michael
54k • written 16 months ago by
Istvan Albert
100k
7
votes
2
replies
893
views
Forum:
Improvement of Wikipedia articles with bioinformatic subjects
Wikipedia
Bioinformatics
15 months ago by
Matthias Zepper
4.5k
1,000 results • Page
2 of 20
Recent Votes
How to normalize long-read RNA-seq data for comparison with short-reads
EdgeR analysis with CPM normalzed counts
Alternative splicing convention
cellular niches analysis with spatial transcriptome data in Seurat and Bioconductor
Answer: Seurat merge and batch correction
Comment: How to convert plink files to Hapmap Format
Comment: How to convert plink files to Hapmap Format
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Recent Replies
Comment: PCA plot
by
ATpoint
82k
What is your question? Add details and clarity. Ask a precise question and please avoid opening more questions on the same underlying issue…
Comment: genome assembly records not present in assembly_summary.txt
by
Joe
21k
If you have the accession numbers can you not use something like `eutils`?
Comment: what is the purpose of indexing the reference genome (Kallisto)
by
ATpoint
82k
For question 1: For question 1: Purpose of indexing a genome/transcriptome/book/anything: https://www.biostars.org/p/212594/ For question …
Comment: Create a new bed file with all pairwise combinations between two other bed files
by
Pierre Lindenbaum
161k
> Next, I tried using bedtools window but in your original post you said > tried finding the intersection of these bed files using bedto…
Comment: How to trim transcripts using information from NCBI contamination screen report
by
Lada
▴ 30
Thank you very much! I tried it out! This is a handy tool useful for many different applications, and in regards to my problem - although …
Comment: Create a new bed file with all pairwise combinations between two other bed files
by
J
• 0
Thank you for replying Pierre. I first added a third column to the SNP bed file, so that I would get a range of 1 for each SNP awk 'B…
Comment: Create a new bed file with all pairwise combinations between two other bed files
by
Pierre Lindenbaum
161k
> using bcftools Show us what you tried
Answer: gvcf joint calling
by
Jeremy Leipzig
22k
> Hi, guys, there is a question about the genomic gVCF file. I wonder > that since gVCF contains the non-var block records, why after merge…
Comment: Missing protein (VEGF-A) in String db
by
shalespringer
• 0
Thank you for replying here; this helped me figure out why MAPK10 was missing from my results. It was also marked as a pseudogene in the En…
Comment: How to convert plink files to Hapmap Format
by
Sofia
• 0
These are the first lines of the output: (Please is it normal to have NA in the P value column ?) CHR …
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
atowns21
• 0
So I used the barcodes that I created (combos of positions 1-10 and 11-20) and I obtained similar alignment stats as the paper I pulled the…
Comment: How to convert plink files to Hapmap Format
by
Sofia
• 0
Thank you so much, it actually worked!
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4.2k
Hi @efc1e545 , First a caveat. the information we most need in order to help guide you to a successful conclusion is not provided in thi…
Answer: Sequence read length shorter than flow cell specification
by
swbarnes2
14k
The company probably had you share your run with someone who needed the extra bases. So you get the extra bases free. Just use them unle…
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
by
Ram
43k
Thank you, the `csvtk spread` is super useful. I usually import into R using `lapply` then `Reduce` using `merge` but this might be easier.
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