Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : all time
all time
today
this week
this month
this year
1,000 results • Page
1 of 20
Sort: Rank
Rank
Views
Votes
Replies
5
votes
4
replies
344
views
Forum:
Ideal PC configurations and operating system for bioinformatics laboratory
PC
1 day ago by
Estevão
• 0
0
votes
0
replies
172
views
Forum:
Improvement on automatic annotation of single-cell RNA-seq data from the literature using LLM
annotation
scRNA
llm
10 days ago by
yxwucq
• 0
4
votes
2
replies
316
views
Forum:
Bioinformatics: Where do I start
Sequencing
updated 16 days ago by
Ram
43k • written 17 days ago by
Adi
▴ 10
7
votes
7
replies
1.5k
views
Forum:
Bioinformatician who was retaliated against after reporting discriminatory harassment - Please help me navigate getting out of the situation I'm in
Career
advice
updated 17 days ago by
Dunois
★ 2.5k • written 18 days ago by
AdviceSeeker
• 0
1
vote
2
replies
359
views
Forum:
VCF bulk handling
bcftools
SnpEff
WGS
VEP
VCF
16 days ago by
Javier
• 0
16
votes
10
replies
1.1k
views
6 follow
Forum:
F*up Night style events for Bioinformatics ? Comment if you're interested!
mistakes
updated 5 weeks ago by
Madelaine Gogol
5.3k • written 5 weeks ago by
Ann
★ 2.4k
1
vote
1
reply
225
views
Forum:
Can I use this community for software development?
software-development
updated 5 weeks ago by
Ram
43k • written 5 weeks ago by
avpuzanov
• 0
5
votes
2
replies
391
views
Forum:
Can questions and answers on biostars be asked only in English? Can't I use Russian for example?
language
updated 5 weeks ago by
Michael
54k • written 5 weeks ago by
avpuzanov
• 0
0
votes
0
replies
178
views
Forum:
Field of Study in Computational Biology
Genomics
Computational-Biology
PhD
updated 6 weeks ago by
Ram
43k • written 6 weeks ago by
Mohammed
• 0
1
vote
3
replies
485
views
Forum:
Development plan for a bioinformatics database developer/coder
developer
7 weeks ago by
pixie@bioinfo
★ 1.5k
7
votes
8
replies
715
views
Forum:
Bioinformatics career transition
career
forum
updated 7 weeks ago by
jared.andrews07
★ 16k • written 7 weeks ago by
jevill17
▴ 20
4
votes
2
replies
491
views
Forum:
Exploring Amino Acid Patterns in Proteins Through N-gram Analysis
protein
CAFA5
7 weeks ago by
Anatoly A.
▴ 10
6
votes
6
replies
780
views
Forum:
You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical
thought-experiment
8 weeks ago by
jared.andrews07
★ 16k
0
votes
0
replies
167
views
Forum:
What other data types and pipelines you would like to see from the Genomics Data Commons (GDC)
gdc
tcga
genomics-data-commons
updated 8 weeks ago by
Ram
43k • written 8 weeks ago by
Zhenyu Zhang
★ 1.2k
0
votes
2
replies
390
views
Forum:
What's the state of the art in bacterial whole genome alignment?
whole
genome
alignment
mauve
8 weeks ago by
Dave Carlson
★ 1.7k
31
votes
12
replies
1.0k
views
7 follow
Forum:
Nextflow and self-made pipelines opinion
nextflow
pipeline
data-analysis
9 weeks ago by
karlaarz
▴ 90
5
votes
4
replies
569
views
Forum:
Would reaching out to local labs and startups help with my career transition?
career
volunteering
updated 10 weeks ago by
GenoMax
142k • written 10 weeks ago by
Mango
▴ 10
1
vote
2
replies
377
views
Forum:
Exploring Career Reentry: Challenges and opportunities for Women After Maternity and Childcare Breaks
Maternity
Career-Gap
career-reentry
updated 10 weeks ago by
ATpoint
82k • written 10 weeks ago by
ashaneev07
▴ 20
8
votes
7
replies
820
views
6 follow
Forum:
Tower Server configuration for NGS data analysis
NGS
updated 10 weeks ago by
emmanouil.a
▴ 120 • written 3 months ago by
harasharan
• 0
1
vote
0
replies
283
views
Forum:
list of bioinformatics tools in cancer genomics
mutations
CNA
cancer
genomics
LOH
updated 10 weeks ago by
Pierre Lindenbaum
161k • written 10 weeks ago by
Bogdan
★ 1.4k
4
votes
2
replies
383
views
Forum:
bulk seq vs. sc-seq
scATAC-seq
ATAC-seq
scRNAseq
RNAseq
updated 12 weeks ago by
dsull
★ 5.9k • written 12 weeks ago by
SebKittelmann
▴ 10
8
votes
6
replies
2.8k
views
Forum:
Demonstrating Exponential Growth In Pre-School
education
written 10.2 years ago by
Asaf
10k
0
votes
0
replies
206
views
Forum:
tutorial for carrier screening analyses?
carrier-screening
updated 3 months ago by
Ram
43k • written 3 months ago by
Akos
▴ 20
2
votes
3
replies
438
views
Forum:
My Project
Project
CLI
MD-Simulations
Molecular-docking
3 months ago by
Ajay A Shettigar
• 0
17
votes
11
replies
1000
views
Forum:
How to overcome the imposter syndrome in bioinformatics?
advice
3 months ago by
sil_bioinfo
▴ 40
10
votes
7
replies
2.2k
views
Forum:
How to learn bioinformatics?
learning
updated 3 months ago by
Samuel Lampa
★ 1.3k • written 23 months ago by
sakichwan
▴ 20
26
votes
27
replies
2.1k
views
10 follow
Forum:
Determining computer time required
computer
hpc
time
updated 3 months ago by
dsull
★ 5.9k • written 3 months ago by
Rozita
▴ 40
7
votes
6
replies
741
views
Forum:
where to work as a bioinformatician (NGS/IA)
employment
omics
ia
ngs
updated 3 months ago by
Ram
43k • written 3 months ago by
Petur
▴ 20
21
votes
12
replies
3.6k
views
Forum:
How to Use Biostars Part-3: Formatting Text and Using GitHub Gists
meta
how-to
documentation
3 months ago by
Ram
43k
2
votes
1
reply
436
views
Forum:
Cataloguing available spatial transcriptomics tools, then linking them together into a workflow?
cytassist
transcriptomics
nanostring
xenium
visium
3 months ago by
LauferVA
4.2k
49
votes
20
replies
2.1k
views
10 follow
Forum:
First experiences matter
first-time
tolerance
updated 3 months ago by
Michael Love
★ 2.6k • written 4 months ago by
Mensur Dlakic
★ 27k
4
votes
3
replies
780
views
Forum:
How to get started in bioinformatics
students
updated 3 months ago by
Ram
43k • written 4 months ago by
Soidihane
▴ 10
2
votes
2
replies
586
views
Forum:
Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
combat
single-cell
omics
batch
rnaseq
updated 4 months ago by
Ram
43k • written 4 months ago by
cwwong13
▴ 40
0
votes
2
replies
3.2k
views
Forum:
I’m considering a career transition from software engineering to bioinformatics. Is it a good fit for me?
career
updated 4 months ago by
GenoMax
142k • written 4 months ago by
Mango
▴ 10
5
votes
3
replies
616
views
Forum:
Binning the rare biosphere
metagenomics
soil
assembly
techniques
binning
updated 4 months ago by
Mensur Dlakic
★ 27k • written 4 months ago by
Konstantin
▴ 20
6
votes
2
replies
669
views
Forum:
how to start Bioinformatics?
basics
updated 4 months ago by
Mensur Dlakic
★ 27k • written 4 months ago by
sajibsuvo70
• 0
19
votes
5
replies
1.1k
views
6 follow
Forum:
What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2023?
genomics
snps
survey
papers
4 months ago by
Raony Guimarães
★ 1.4k
4
votes
6
replies
932
views
6 follow
Forum:
Bioinformatics: what do you think of it in the next 20 years?
future
updated 5 months ago by
Ram
43k • written 5 months ago by
Daniel
• 0
1
vote
1
reply
493
views
Forum:
want to work in open source project/project in bioinformatics
project
updated 5 months ago by
Ram
43k • written 5 months ago by
Afeef
• 0
3
votes
5
replies
1.0k
views
Forum:
Current Trends in Bioinformatics
structural-bioinformatics
updated 5 months ago by
Ram
43k • written 5 months ago by
Paulo
• 0
21
votes
11
replies
2.5k
views
6 follow
Forum:
Rust bioinformatics projects ideas
projects
scRNA-seq
RNA-seq
Rust
updated 5 months ago by
Jeremy Leipzig
22k • written 14 months ago by
bompipi95
▴ 150
176
votes
46
replies
19k
views
26 follow
Forum:
Crac: Funny And/Or Weird Names For Bioinformatics Tools
humor
5 months ago by
Istvan Albert
100k
3
votes
2
replies
626
views
Forum:
RNA-Seq data analysis - question
Python
RNA-Seq
R
updated 5 months ago by
fturner
▴ 10 • written 5 months ago by
sil_bioinfo
▴ 40
0
votes
0
replies
374
views
Forum:
How to learn bioinformatics online?
self-education
education
learning
updated 6 months ago by
Ram
43k • written 6 months ago by
Brian Rey | BioLearn
• 0
6
votes
5
replies
2.3k
views
Forum:
Maintaning internal or private installation of Biostar or a similar Q&A site
Biostars
6 months ago by
tshtatland
▴ 190
7
votes
9
replies
1.4k
views
6 follow
Forum:
Mentor for a beginner bioinformatics student
project
mentor
6 months ago by
UT_FAN
▴ 40
0
votes
0
replies
463
views
Forum:
Steps after doublet detection in single cell data
scRNA
doublet
6 months ago by
ishwarvh
• 0
0
votes
0
replies
357
views
Forum:
Automated Checks And QA
retrospective
6 months ago by
Sasha
▴ 840
7
votes
13
replies
1.4k
views
Forum:
How do you validate and verify your pipeline's software updates?
Validation
Verification
Quality-Assurance
updated 6 months ago by
Ram
43k • written 7 months ago by
kieran
▴ 10
21
votes
7
replies
11k
views
Forum:
Bioinformatics short paper journal resource [software/webapps/database]
journal
software
webapp
updated 7 months ago by
Gennady Khvorykh
▴ 100 • written 8.1 years ago by
Sukhi Singh
11k
1,000 results • Page
1 of 20
Recent Votes
Answer: Please Explain Window Size and Step Size
How do I access genome coverage using SPADES?
Answer: How do I access genome coverage using SPADES?
fGSEA result to csv
A: fGSEA result to csv
unimplemented type 'list' in 'EncodeElement' error in a Rscript run in Ubuntu terminal
Comment: Help with choosing a model species for Augustus for a de novo assembled genome.
Recent Locations •
All
United States,
1 minute ago
Iran,
1 minute ago
Frankrike,
2 minutes ago
Greenland,
2 minutes ago
UCLA,
3 minutes ago
UK,
4 minutes ago
Singapore,
4 minutes ago
Recent Awards •
All
Popular Question
to
M.
▴ 30
Student
to
carolofharvest
▴ 30
Commentator
to
e.r.zakiev
▴ 210
Scholar
to
dsull
★ 5.9k
Scholar
to
eebloom
▴ 80
Popular Question
to
ManuelDB
▴ 80
Popular Question
to
rustykb
▴ 20
Recent Replies
Comment: IGV interpretation for ATM gene for chromosome 11 for a deceased partient
by
mikemakaveli1
• 0
![enter image description here][1] [1]: /media/images/3f50fe15-72e4-4f59-b301-eea63f95
Comment: IGV interpretation for ATM gene for chromosome 11 for a deceased partient
by
mikemakaveli1
• 0
This is what I found, sorry for the previous image ![enter image description here][1] [1]: /media/images/0f9b75f9-bd7a-4b5b-a6d5-d79…
Comment: IGV interpretation for ATM gene for chromosome 11 for a deceased partient
by
mikemakaveli1
• 0
![enter image description here][1] [1]: /media/images/1e0cd4e3-b35b-407c-b41d-08a0f746
Comment: IGV interpretation for ATM gene for chromosome 11 for a deceased partient
by
mikemakaveli1
• 0
no, i have uploaded the file and selected the file, not sure of the blank space
Comment: Help with choosing a model species for Augustus for a de novo assembled genome.
by
Vijith
▴ 30
Hi dthorbur, thanks for the response. I have run Augustus using Arabidopsis as a species. I would like to know about the suitability of usi…
Comment: IGV interpretation for ATM gene for chromosome 11 for a deceased partient
by
ATpoint
82k
It's an empty screenshot in terms of nothing loaded into IGV, you realize that?
Comment: IGV interpretation for ATM gene for chromosome 11 for a deceased partient
by
mikemakaveli1
• 0
how can I interpret the mutation for the gene of ATM
Comment: How does gene length effect the number of reads mapped
by
dsull
★ 5.9k
Alicia Oshlack has done some cool work on this but even the plots in her papers show that TPMs sometimes overcorrect and the relationship i…
Comment: Raw counts using stringtie
by
ahmad.sajad4541
• 0
![stringtie error][1] [1]: /media/images/6475a009-e1a6-412b-8515-a8aec173
Answer: Differential Expression Analysis using DESeq2 in R
by
Erina
• 0
![The below image contains the code and result also.][1] [1]: /media/images/96562b96-d508-4f67-96d1-7c71aa17
Comment: High Malat-1 expression in single cell data
by
dsull
★ 5.9k
My response above was actually partly inspired off of a reading of your paper :)
Comment: Differential Expression Analysis using DESeq2 in R
by
ATpoint
82k
> everything is showing equal in environment section. But when I am checking for equalities, it’s showing False No idea what this means. P…
Answer: Analysis of intronic reads included scRNA-seq data
by
t.montserrat.ayuso
▴ 10
You can calculate the percentage of intronic reads for each cell using the [DropletQC][1] package for R. In this preprint we discuss th…
Comment: How does gene length effect the number of reads mapped
by
i.sudbery
19k
I did say almost - obviously things are going to get tricky at gene ends - this is why we have the concept of effective length. Its interst…
Answer: High Malat-1 expression in single cell data
by
t.montserrat.ayuso
▴ 10
Malat1 correlates with the intronic content and can be used as a nuclear indicator. In this preprint we discuss about this artifact and the…
Traffic: 2876 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6