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460 results • Page
1 of 10
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Views
Votes
Replies
5
votes
3
replies
292
views
Forum:
Ideal PC configurations and operating system for bioinformatics laboratory
PC
updated 8 days ago by
GenoMax
141k • written 8 days ago by
Estevão
• 0
0
votes
0
replies
170
views
Forum:
Improvement on automatic annotation of single-cell RNA-seq data from the literature using LLM
annotation
scRNA
llm
8 days ago by
yxwucq
• 0
4
votes
2
replies
311
views
Forum:
Bioinformatics: Where do I start
Sequencing
updated 15 days ago by
Ram
43k • written 15 days ago by
Adi
▴ 10
7
votes
7
replies
1.4k
views
Forum:
Bioinformatician who was retaliated against after reporting discriminatory harassment - Please help me navigate getting out of the situation I'm in
Career
advice
updated 16 days ago by
Dunois
★ 2.5k • written 17 days ago by
AdviceSeeker
• 0
1
vote
2
replies
353
views
Forum:
VCF bulk handling
bcftools
SnpEff
WGS
VEP
VCF
14 days ago by
Javier
• 0
16
votes
10
replies
1.1k
views
6 follow
Forum:
F*up Night style events for Bioinformatics ? Comment if you're interested!
mistakes
updated 4 weeks ago by
Madelaine Gogol
5.3k • written 4 weeks ago by
Ann
★ 2.4k
1
vote
1
reply
223
views
Forum:
Can I use this community for software development?
software-development
updated 5 weeks ago by
Ram
43k • written 5 weeks ago by
avpuzanov
• 0
5
votes
2
replies
391
views
Forum:
Can questions and answers on biostars be asked only in English? Can't I use Russian for example?
language
updated 5 weeks ago by
Michael
54k • written 5 weeks ago by
avpuzanov
• 0
0
votes
0
replies
177
views
Forum:
Field of Study in Computational Biology
Genomics
Computational-Biology
PhD
updated 6 weeks ago by
Ram
43k • written 6 weeks ago by
Mohammed
• 0
1
vote
3
replies
483
views
Forum:
Development plan for a bioinformatics database developer/coder
developer
6 weeks ago by
pixie@bioinfo
★ 1.5k
7
votes
8
replies
705
views
Forum:
Bioinformatics career transition
career
forum
updated 6 weeks ago by
jared.andrews07
★ 16k • written 6 weeks ago by
jevill17
▴ 20
4
votes
2
replies
487
views
Forum:
Exploring Amino Acid Patterns in Proteins Through N-gram Analysis
protein
CAFA5
7 weeks ago by
Anatoly A.
▴ 10
6
votes
6
replies
778
views
Forum:
You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical
thought-experiment
8 weeks ago by
jared.andrews07
★ 16k
0
votes
0
replies
164
views
Forum:
What other data types and pipelines you would like to see from the Genomics Data Commons (GDC)
gdc
tcga
genomics-data-commons
updated 8 weeks ago by
Ram
43k • written 8 weeks ago by
Zhenyu Zhang
★ 1.2k
0
votes
2
replies
386
views
Forum:
What's the state of the art in bacterial whole genome alignment?
whole
genome
alignment
mauve
8 weeks ago by
Dave Carlson
★ 1.7k
31
votes
12
replies
1.0k
views
7 follow
Forum:
Nextflow and self-made pipelines opinion
nextflow
pipeline
data-analysis
8 weeks ago by
karlaarz
▴ 90
5
votes
4
replies
566
views
Forum:
Would reaching out to local labs and startups help with my career transition?
career
volunteering
updated 9 weeks ago by
GenoMax
141k • written 9 weeks ago by
Mango
▴ 10
1
vote
2
replies
373
views
Forum:
Exploring Career Reentry: Challenges and opportunities for Women After Maternity and Childcare Breaks
Maternity
Career-Gap
career-reentry
updated 10 weeks ago by
ATpoint
82k • written 10 weeks ago by
ashaneev07
▴ 20
8
votes
7
replies
815
views
6 follow
Forum:
Tower Server configuration for NGS data analysis
NGS
updated 10 weeks ago by
emmanouil.a
▴ 120 • written 3 months ago by
harasharan
• 0
1
vote
0
replies
282
views
Forum:
list of bioinformatics tools in cancer genomics
mutations
CNA
cancer
genomics
LOH
updated 10 weeks ago by
Pierre Lindenbaum
161k • written 10 weeks ago by
Bogdan
★ 1.4k
4
votes
2
replies
382
views
Forum:
bulk seq vs. sc-seq
scATAC-seq
ATAC-seq
scRNAseq
RNAseq
updated 12 weeks ago by
dsull
★ 5.9k • written 12 weeks ago by
SebKittelmann
▴ 10
8
votes
6
replies
2.8k
views
Forum:
Demonstrating Exponential Growth In Pre-School
education
written 10.2 years ago by
Asaf
10k
0
votes
0
replies
204
views
Forum:
tutorial for carrier screening analyses?
carrier-screening
updated 3 months ago by
Ram
43k • written 3 months ago by
Akos
▴ 20
2
votes
3
replies
437
views
Forum:
My Project
Project
CLI
MD-Simulations
Molecular-docking
3 months ago by
Ajay A Shettigar
• 0
17
votes
11
replies
997
views
Forum:
How to overcome the imposter syndrome in bioinformatics?
advice
3 months ago by
sil_bioinfo
▴ 40
10
votes
7
replies
2.2k
views
Forum:
How to learn bioinformatics?
learning
updated 3 months ago by
Samuel Lampa
★ 1.3k • written 23 months ago by
sakichwan
▴ 20
26
votes
27
replies
2.1k
views
10 follow
Forum:
Determining computer time required
computer
hpc
time
updated 3 months ago by
dsull
★ 5.9k • written 3 months ago by
Rozita
▴ 40
7
votes
6
replies
739
views
Forum:
where to work as a bioinformatician (NGS/IA)
employment
omics
ia
ngs
updated 3 months ago by
Ram
43k • written 3 months ago by
Petur
▴ 20
21
votes
12
replies
3.5k
views
Forum:
How to Use Biostars Part-3: Formatting Text and Using GitHub Gists
meta
how-to
documentation
3 months ago by
Ram
43k
2
votes
1
reply
434
views
Forum:
Cataloguing available spatial transcriptomics tools, then linking them together into a workflow?
cytassist
transcriptomics
nanostring
xenium
visium
3 months ago by
LauferVA
4.2k
49
votes
20
replies
2.0k
views
10 follow
Forum:
First experiences matter
first-time
tolerance
updated 3 months ago by
Michael Love
★ 2.6k • written 3 months ago by
Mensur Dlakic
★ 27k
4
votes
3
replies
778
views
Forum:
How to get started in bioinformatics
students
updated 3 months ago by
Ram
43k • written 4 months ago by
Soidihane
▴ 10
2
votes
2
replies
586
views
Forum:
Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
combat
single-cell
omics
batch
rnaseq
updated 4 months ago by
Ram
43k • written 4 months ago by
cwwong13
▴ 40
0
votes
2
replies
3.2k
views
Forum:
I’m considering a career transition from software engineering to bioinformatics. Is it a good fit for me?
career
updated 4 months ago by
GenoMax
141k • written 4 months ago by
Mango
▴ 10
5
votes
3
replies
613
views
Forum:
Binning the rare biosphere
metagenomics
soil
assembly
techniques
binning
updated 4 months ago by
Mensur Dlakic
★ 27k • written 4 months ago by
Konstantin
▴ 20
6
votes
2
replies
667
views
Forum:
how to start Bioinformatics?
basics
updated 4 months ago by
Mensur Dlakic
★ 27k • written 4 months ago by
sajibsuvo70
• 0
19
votes
5
replies
1.1k
views
6 follow
Forum:
What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2023?
genomics
snps
survey
papers
4 months ago by
Raony Guimarães
★ 1.4k
4
votes
6
replies
932
views
6 follow
Forum:
Bioinformatics: what do you think of it in the next 20 years?
future
updated 4 months ago by
Ram
43k • written 5 months ago by
Daniel
• 0
1
vote
1
reply
492
views
Forum:
want to work in open source project/project in bioinformatics
project
updated 4 months ago by
Ram
43k • written 5 months ago by
Afeef
• 0
3
votes
5
replies
1.0k
views
Forum:
Current Trends in Bioinformatics
structural-bioinformatics
updated 4 months ago by
Ram
43k • written 5 months ago by
Paulo
• 0
21
votes
11
replies
2.5k
views
6 follow
Forum:
Rust bioinformatics projects ideas
projects
scRNA-seq
RNA-seq
Rust
updated 5 months ago by
Jeremy Leipzig
22k • written 14 months ago by
bompipi95
▴ 150
176
votes
46
replies
19k
views
26 follow
Forum:
Crac: Funny And/Or Weird Names For Bioinformatics Tools
humor
5 months ago by
Istvan Albert
100k
3
votes
2
replies
626
views
Forum:
RNA-Seq data analysis - question
Python
RNA-Seq
R
updated 5 months ago by
fturner
▴ 10 • written 5 months ago by
sil_bioinfo
▴ 40
0
votes
0
replies
371
views
Forum:
How to learn bioinformatics online?
self-education
education
learning
updated 6 months ago by
Ram
43k • written 6 months ago by
Brian Rey | BioLearn
• 0
6
votes
5
replies
2.3k
views
Forum:
Maintaning internal or private installation of Biostar or a similar Q&A site
Biostars
6 months ago by
tshtatland
▴ 190
7
votes
9
replies
1.4k
views
6 follow
Forum:
Mentor for a beginner bioinformatics student
project
mentor
6 months ago by
UT_FAN
▴ 40
0
votes
0
replies
460
views
Forum:
Steps after doublet detection in single cell data
scRNA
doublet
6 months ago by
ishwarvh
• 0
0
votes
0
replies
357
views
Forum:
Automated Checks And QA
retrospective
6 months ago by
Sasha
▴ 840
7
votes
13
replies
1.4k
views
Forum:
How do you validate and verify your pipeline's software updates?
Validation
Verification
Quality-Assurance
updated 6 months ago by
Ram
43k • written 7 months ago by
kieran
▴ 10
21
votes
7
replies
11k
views
Forum:
Bioinformatics short paper journal resource [software/webapps/database]
journal
software
webapp
updated 7 months ago by
Gennady Khvorykh
▴ 100 • written 8.1 years ago by
Sukhi Singh
11k
460 results • Page
1 of 10
Recent Votes
Comment: Can't install AnnotationHub
C: TOPGO- how to do GO enrichment using a custom go database?
Answer: NGS forensics: how to know if data is fabricated
Comment: Adjust pvalue in R with different approach give me all different outcome
Comment: Bacterial plasmid analysis
Comment: DESeq2 processing problems
Comment: What does 'bundle_uuid' refer to in this metadata sheet?
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Popular Question
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mgranada3
▴ 30
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maryak
▴ 20
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nicole.kavanagh
• 0
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elcortegano
▴ 200
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19k
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Recent Replies
Answer: Basic stats in hierfstat
by
mdav
• 0
Hi Zoe, did you find an answer for this? I am also getting the same error.
Comment: GATK won't produce figures while analyzing covariates to generate 'recal_plots.p
by
GenoMax
141k
Your cluster may be missing libraries etc to create the PDF plots (this looks like a cluster job submission) on your cluster. Did you check…
Comment: Post-imputation plot
by
kl
▴ 10
Ok yes I think my thought was that given these errors, I could remove the mismatches and flip the alleles which seem to need flipping based…
Comment: Bacterial plasmid analysis
by
nicole.kavanagh
• 0
I think I will perhaps use their predominant PlasmidFinder type to group plasmids together and create separate core phylogenies for each as…
Comment: Bacterial plasmid analysis
by
GenoMax
141k
Can you classify the plasmids based on function (resistance genes they are carrying or some other criteria). Sizes above are indicating a w…
Comment: DESeq2 processing problems
by
ATpoint
82k
Initially posted here https://support.bioconductor.org/p/9158036/ where I suggested to put code and data and noted that GEOquery returns ar…
Answer: Post-imputation plot
by
LChart
3.9k
I agree that some need to be flipped (A/T and C/G where your panel frequency is 1 - ref panel frequency). There are other variants which yo…
Comment: RNA editing sites based on DNA seq and RNA seq
by
Adam
▴ 30
Are those 20% unaligned reads coming after hyper-editing detection?
Answer: How to find overlap of clusters in two seurat porject
by
Adam
▴ 30
I think your best bet would be to use annotation mapping. You can use the features of your clusters in group 1 and apply them to group 2 to…
Answer: DESeq2 processing problems
by
Adam
▴ 30
> when I put in the dataset, I am not able to run it for DEG analysis because system asks me to remove the first column which is of gene na…
Comment: Bacterial plasmid analysis
by
nicole.kavanagh
• 0
Thank you so much for your quick response, I have been searching scientific papers for about a week but have failed to come up with a reaso…
Comment: Bacterial plasmid analysis
by
GenoMax
141k
> however I'm not sure this would be appropriate in my case as the plasmid sequences are obviously much more diverse and vary in size Can…
Answer: cnetplot category names are too long
by
bkleiboeker
▴ 370
I'm sure someone could find a more elegant solution using `stringr::str_wrap`, but for a one-time solution I did this: # my results of…
Comment: Telescope issue
by
GenoMax
141k
You could edit the SAM file but I wonder if this problem is present in your original fastq data file so if not inconvenient do the alignmen…
Comment: Mutect2 for mitochondria variant discovery
by
GenoMax
141k
> I keep getting error. Without providing information about the actual error no one can help. Please edit the post and add this informati…
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