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460 results • Page
3 of 10
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Views
Votes
Replies
36
votes
34
replies
2.8k
views
9 follow
Forum:
New to bioinformatics.....
gene
updated 11 months ago by
Ram
43k • written 6.1 years ago by
sms.00196
• 0
3
votes
4
replies
2.8k
views
Forum:
hands on resources for high school students with advanced CS skills
informatics
education
high-school
updated 11 months ago by
Ram
43k • written 5.8 years ago by
LauferVA
4.2k
1
vote
13
replies
2.8k
views
Forum:
Bioinformatics computer upgrade help
computer
updated 10 months ago by
Ram
43k • written 3.8 years ago by
truebeliever24
▴ 50
2
votes
3
replies
2.8k
views
Forum:
What is the most popular programming language used in bioinformatics?
programming-languages
updated 11 months ago by
Ram
43k • written 6.9 years ago by
inkprs
▴ 70
7
votes
6
replies
2.8k
views
7 follow
Forum:
Should I specialise in bioinformatics?
career
updated 11 months ago by
Ram
43k • written 5.5 years ago by
saulpierotti
▴ 10
31
votes
41
replies
2.7k
views
12 follow
Forum:
Question regarding journal publications
publications
journals
updated 10 months ago by
Ram
43k • written 4.2 years ago by
K.Gee
▴ 40
8
votes
4
replies
2.7k
views
Forum:
SNP calling in 2018
variant
gatk
SNP
updated 11 months ago by
Ram
43k • written 6.2 years ago by
Picasa
▴ 640
34
votes
8
replies
2.7k
views
9 follow
Forum:
Bioinformatician, a jack of all trades, but in the eye of the CV-beholder a master of none? How can your CV reflect the diverse skills that you have …
cv
industry
career
updated 10 months ago by
Ram
43k • written 4.5 years ago by
'
▴ 300
29
votes
18
replies
2.7k
views
12 follow
Forum:
what are the big questions in bioinformatics field nowadays
genome
updated 10 months ago by
Ram
43k • written 4.2 years ago by
t4192
▴ 20
12
votes
5
replies
2.6k
views
Forum:
We Need Your Input! Help Get Information For The Informatics Community And Get A Free Gift Card!
algorithm
ngs
updated 10 months ago by
Ram
43k • written 10.9 years ago by
BioPlanet
▴ 30
2
votes
2
replies
2.6k
views
Forum:
What are the challenges faced in bioinformatics research
sequencing
alignment
updated 11 months ago by
Ram
43k • written 6.9 years ago by
Sundeep Kumar
▴ 10
15
votes
24
replies
2.6k
views
7 follow
Forum:
Airport.bio: First class ticket to any biological database in the world
RNA-Seq
ChIP-Seq
SNP
updated 11 months ago by
Ram
43k • written 6.1 years ago by
Bohdan Khomtchouk
▴ 350
3
votes
4
replies
2.6k
views
Forum:
How long does it take to build a pipeline?
next-gen
self-learning
updated 11 months ago by
Ram
43k • written 6.6 years ago by
lamteva.vera
▴ 220
0
votes
4
replies
2.6k
views
Forum:
Quantum Computing in Genomics
genome
next-gen
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.2 years ago by
hafiz.talhamalik
▴ 350
3
votes
27
replies
2.6k
views
7 follow
Forum:
What server do you use?
HPC
AWS
updated 11 months ago by
Ram
43k • written 5.8 years ago by
caggtaagtat
★ 1.9k
2
votes
3
replies
2.5k
views
Forum:
R books with Quantitative Genetics examples?
R
updated 11 months ago by
Ram
43k • written 6.2 years ago by
thegreatelector
• 0
14
votes
6
replies
2.5k
views
6 follow
Forum:
Bioinformatics experience in programming
python
R
updated 11 months ago by
Ram
43k • written 5.7 years ago by
lucas_
▴ 20
43
votes
37
replies
2.5k
views
7 follow
Forum:
Checking the quality and reliability in bioinformatics
reproducibility
updated 11 months ago by
Ram
43k • written 6.6 years ago by
zizigolu
★ 4.3k
21
votes
11
replies
2.5k
views
6 follow
Forum:
Rust bioinformatics projects ideas
projects
scRNA-seq
RNA-seq
Rust
updated 5 months ago by
Jeremy Leipzig
22k • written 14 months ago by
bompipi95
▴ 150
18
votes
12
replies
2.5k
views
6 follow
Forum:
why GATK makes things more complicated ?
genomics
updated 11 months ago by
Ram
43k • written 5.2 years ago by
Learner
▴ 280
6
votes
6
replies
2.5k
views
Forum:
Trouble finding job with MS in Bioinformatics
next-gen
updated 11 months ago by
Ram
43k • written 5.9 years ago by
Moneeb Bajwa
▴ 10
6
votes
4
replies
2.5k
views
Forum:
Ru/Read Until in Nanopore sequencers
Oxford-Nanopore
alignment
sequencing
updated 10 months ago by
Ram
43k • written 4.2 years ago by
jean.elbers
★ 1.7k
8
votes
6
replies
2.4k
views
Forum:
How do you organize sequence data (FASTQs)?
RNA-Seq
sequencing
updated 11 months ago by
Ram
43k • written 6.0 years ago by
Daniel E Cook
▴ 280
12
votes
14
replies
2.4k
views
8 follow
Forum:
Recovering bam files after unknown deletion in the storage
photorec
bam
sequencing
written 4.9 years ago by
Gabriel Wajnberg
▴ 70
11
votes
9
replies
2.4k
views
7 follow
Forum:
Feature Selection and Dimensionality Reduction in 10X scRNA-seq data
software-error
pca
scRNA-seq
updated 11 months ago by
Ram
43k • written 4.3 years ago by
ATpoint
82k
8
votes
15
replies
2.4k
views
7 follow
Forum:
How to identify your analytic data is true?
RNA-Seq
ChIP-Seq
next-gen-sequencing
updated 11 months ago by
Ram
43k • written 6.7 years ago by
Hughie
▴ 80
3
votes
1
reply
2.4k
views
Forum:
Pipeline suggestions for GO & pathway analysis for species without reference genome
next-gen
RNA-Seq
de-novo
updated 11 months ago by
Ram
43k • written 6.9 years ago by
Whoknows
▴ 960
18
votes
11
replies
2.4k
views
8 follow
Forum:
Create a File format to store Variant
hgvs
json
variant
updated 11 months ago by
Ram
43k • written 5.8 years ago by
sacha
★ 2.4k
5
votes
5
replies
2.4k
views
Forum:
BCL files as deliverables from a sequencing center
core-facility
service-provider
updated 11 months ago by
Ram
43k • written 4.9 years ago by
Ido Tamir
5.2k
9
votes
14
replies
2.4k
views
Forum:
MS Bioinformatics Project
assembly
sequencing
alignment
R
SNP
updated 11 months ago by
Ram
43k • written 6.1 years ago by
Moneeb Bajwa
▴ 10
7
votes
8
replies
2.4k
views
Forum:
Virus Genome Length and GC Content of SARS-COV-2 causing COVID-19
sequence
genome
updated 10 months ago by
Ram
43k • written 4.1 years ago by
dulankak
▴ 30
15
votes
10
replies
2.3k
views
6 follow
Forum:
help identifying bioinformatics operations tools
database
next-gen
operations
genomics
updated 11 months ago by
Ram
43k • written 5.4 years ago by
jsmedmar
▴ 80
11
votes
9
replies
2.3k
views
Forum:
Survey: help define Gencode and NCBI primary transcripts
refseq
ensembl
gencode
ncbi
transcript
updated 11 months ago by
Ram
43k • written 6.1 years ago by
Emily
23k
34
votes
5
replies
2.3k
views
Forum:
what we should reply when we are asked do you have any question?
career
interview
updated 11 months ago by
Ram
43k • written 6.9 years ago by
zizigolu
★ 4.3k
6
votes
5
replies
2.3k
views
Forum:
Maintaning internal or private installation of Biostar or a similar Q&A site
Biostars
6 months ago by
tshtatland
▴ 190
6
votes
1
reply
2.3k
views
Forum:
How to become employable in Bioinformatics, starting with degree and experience in CS/Software Engineering?
computer-scientist
software-engineer
updated 11 months ago by
Ram
43k • written 5.7 years ago by
Fanta
• 0
28
votes
15
replies
2.3k
views
12 follow
Forum:
Should bioinformaticians learn the scientific names of plants and animals?
sequence
updated 11 months ago by
Ram
43k • written 5.8 years ago by
ivan.radonov
▴ 10
30
votes
16
replies
2.2k
views
9 follow
Forum:
Which programming langauge shall I start as a beginner in Bioinformatics
programming-language
single-cell
updated 10 months ago by
Ram
43k • written 4.0 years ago by
nkg.bb
• 0
0
votes
1
reply
2.2k
views
Forum:
How's the bioinformatics engineering path? How to become a bioinformatics engineer?
machine-learning
Bioinformatics-engineer
updated 10 months ago by
Ram
43k • written 4.0 years ago by
SupBioInformatics
▴ 60
4
votes
2
replies
2.2k
views
Forum:
wet-lab vs dry-lab scientists
cv
language
updated 10 months ago by
Ram
43k • written 4.2 years ago by
igor
13k
10
votes
7
replies
2.2k
views
Forum:
How to learn bioinformatics?
learning
updated 3 months ago by
Samuel Lampa
★ 1.3k • written 23 months ago by
sakichwan
▴ 20
10
votes
6
replies
2.2k
views
Forum:
How to acknowledge in the paper a reference genome that hasn't been published yet?
reference
paper
updated 11 months ago by
Ram
43k • written 5.7 years ago by
ciemanek
▴ 140
31
votes
16
replies
2.2k
views
8 follow
Forum:
What is in your opinion the current state-of-the-art sequencing platform for genomic assembly (Nov 2019)
next-gen-sequencing
assembly
genome
updated 10 months ago by
Ram
43k • written 4.5 years ago by
Antonio R. Franco
★ 5.1k
0
votes
4
replies
2.2k
views
Forum:
Multiple Sequence Alignment Applications
snp
updated 11 months ago by
Ram
43k • written 4.8 years ago by
manimphil89
• 0
15
votes
9
replies
2.2k
views
6 follow
Forum:
[Opinion] - What alignment software do you use?
next-gen
alignment
updated 11 months ago by
Ram
43k • written 6.1 years ago by
Andrew_MacGregor
▴ 30
7
votes
4
replies
2.2k
views
Forum:
How hard it is to get a bioinformatics degree in one country but find a career in another country?
career
Masters
updated 11 months ago by
Ram
43k • written 5.9 years ago by
dominic.dong
▴ 10
1
vote
6
replies
2.2k
views
Forum:
shotgun sequencing and clone-based sequencing
sanger-sequencing
updated 11 months ago by
Ram
43k • written 6.6 years ago by
mm521
• 0
14
votes
10
replies
2.1k
views
Forum:
WGBS alignment with BitMapperBS
BitMapperBS
bismark
updated 11 months ago by
Ram
43k • written 4.8 years ago by
Shicheng Guo
★ 9.4k
3
votes
6
replies
2.1k
views
Forum:
Choosing the appropriate test for differential analysis: Limma or Mann-Whitney (with BH correction)? Test for normality
R
Shapiro-Wilk
Limma
Mann-Whitney
updated 10 months ago by
Ram
43k • written 4.0 years ago by
innyus
▴ 40
24
votes
26
replies
2.1k
views
6 follow
Forum:
Organizing a Bioinformatics Conference ?
meeting
conference
updated 11 months ago by
Ram
43k • written 6.5 years ago by
Pierre Lindenbaum
161k
460 results • Page
3 of 10
Recent Votes
Comment: High Malat-1 expression in single cell data
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Answer: Extract protein sequence
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Answer: Source other conda environments in a nextflow pipeline when nextflow itself is i
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The reason for your problem was most likely due to you relative complex data and too little system memory. For 20000-30000 transcriptome se…
Comment: Perfom a Gene Ontology Analysis from GO terms txt file
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Your table should look like this (GO terms): ``` geneid GOid Zm00001eb000010 GO:0003690;GO:0003727;GO:0019843;GO:0005739 Zm00001eb000020 G…
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I understand, here is an example with topGO where you need a differential expression table (DESeq2 for example) and a table of GO terms: `…
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Thank u for your reply. The problem is that I used the genome and gene annotation from that webpage, not ensemble or ncbi, so I have to use…
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Hello, To perform functional enrichment analysis there are packages such as topGO or clusterProfiler that can work very well. Lately I've …
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The anti-diagonal band does suggest some fraction of genotypes are strand-flipped - probably G/C or A/T variants.
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Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the cod…
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Thank you! I need this for eukaryotic organism and known protein sequences, but I guess seqkit would work well!
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Paper referred to in question: https://pubmed.ncbi.nlm.nih.gov/29195078/ > so I want to understand how you reduced the 12063 genes to 978…
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Protein attribute prediction
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@kevin May I know whether your comments and edits were mainly based on the fact that "Previously, [crazy] people had been using the origina…
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Wow, I was shocked at this AI answer that looks to be a good start for using UniProt. Sharing it in case it is useful. (It will work in ses…
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> Can you clarify what you mean by "100% of reads pass cutadapt, even > though 70% of reads contain adapters and get trimmed. The header o…
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If you have independent information available (e.g. genotype data for both individuals) then you *may* be able to assign reads based on the…
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You didn't mention what kind of organism you are working with and what kind of protein you are looking for? If it happens to be a microbia…
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