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1,000 results • Page
4 of 20
Sort: Votes
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Views
Votes
Replies
9
votes
9
replies
4.7k
views
ATAC-seq TSS profile plot interpretation
ATAC-seq
TSS
V-plot
4.4 years ago by
nanoide
▴ 120
9
votes
20
replies
4.3k
views
Solve SAM issues flagged by Picard's ValidateSamFile
Picard
SAM
updated 13 months ago by
Ram
43k • written 5.7 years ago by
marongiu.luigi
▴ 710
9
votes
7
replies
2.4k
views
Merging BWT indices for BWA
BWA
BWT
read aligner
merge
5.5 years ago by
rgc255
▴ 60
9
votes
10
replies
1.9k
views
How to use Poisson distribution to get meaningful expression counts?
statistics
rna-seq
updated 2.8 years ago by
i.sudbery
19k • written 2.8 years ago by
c_u
▴ 520
9
votes
8
replies
1.7k
views
Union of unaligned fastq reads
RNA-Seq
6.9 years ago by
Jeffin Rockey
★ 1.3k
9
votes
10
replies
2.2k
views
[solved] Convert fold changes of multiple transcripts of a given gene to a single value characterising this gene
RNA-Seq
7.6 years ago by
biostart
▴ 370
9
votes
7
replies
5.6k
views
fisher test with multiple samples
statistics
updated 2.5 years ago by
Ram
43k • written 9.8 years ago by
juncheng
▴ 220
9
votes
17
replies
2.2k
views
Creating intergenic bam file
R
genome
intergenic
alignment
7.7 years ago by
erincyurtman
• 0
9
votes
15
replies
1.3k
views
Construction of single sequence assembly out of contigs
Contigs
Bacteria
Genome
WGS
5 months ago by
analyst
▴ 30
9
votes
27
replies
7.6k
views
How do I use Glimmer 3.02?
sequencing
updated 5.3 years ago by
ojelizodun
• 0 • written 6.1 years ago by
nattzy94
▴ 50
9
votes
14
replies
4.3k
views
Explanation on Paired end single index for RNA seq
RNA-Seq
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
hothriananya
▴ 70
9
votes
10
replies
5.6k
views
6 follow
Trimmomatic: Higher number of "forward only" than "reverse only" surviving reads
trimming
RNA-seq
updated 4.5 years ago by
nidhi.vijayan13
▴ 30 • written 5.7 years ago by
Lucila
▴ 20
9
votes
5
replies
3.8k
views
Which bias flags to run with Salmon before DESeq2 analysis?
RNA-Seq
Salmon
DESeq2
Bias Flags
4.9 years ago by
cameron.holman
▴ 20
9
votes
13
replies
15k
views
Sort bam file by coordinates using samtools
next-gen-sequencing
gene
rna-seq
updated 10 months ago by
Ram
43k • written 5.6 years ago by
Shahzad
▴ 30
9
votes
7
replies
3.6k
views
How to use Galaxy to obtain read counts from SRA files
Galaxy
read count
SRA file
7.6 years ago by
statfa
▴ 760
9
votes
4
replies
2.1k
views
[Code] Converte fasta/fa files to fastq
perl
fastq
sed
fasta
updated 21 months ago by
Ram
43k • written 8.5 years ago by
Shicheng Guo
★ 9.4k
9
votes
7
replies
1.1k
views
ChIP-seq; investigate binding within region of tRNA genes
tRNA
ChIP
nf-core
ChIP-seq
updated 23 months ago by
Ram
43k • written 2.0 years ago by
2138493o
▴ 20
9
votes
11
replies
4.5k
views
please someone help me with running mirdeep2
software error
mirdeep2
perl
7.6 years ago by
zizigolu
★ 4.3k
9
votes
12
replies
1.5k
views
Copy number variations analysis
R
CNV
updated 4.4 years ago by
zx8754
11k • written 4.4 years ago by
rprog008
▴ 70
9
votes
11
replies
1.5k
views
6 follow
Split up excel cell into multiple records
excel
byonic
6.8 years ago by
rshipman
▴ 30
9
votes
3
replies
7.2k
views
Statistical Distributions In Rna-Seq Data Analysis
statistics
rna
updated 5.1 years ago by
Biostar
20 • written 12.1 years ago by
Ngsnewbie
▴ 380
9
votes
2
replies
5.3k
views
Biopython Import Error
biopython
updated 11.9 years ago by
Michael Kuhn
5.0k • written 11.9 years ago by
angeles.sepulvedap
• 0
9
votes
16
replies
3.8k
views
6 follow
covert SAM to full length fasta
fasta
SAM
updated 13 months ago by
Ram
43k • written 5.7 years ago by
marongiu.luigi
▴ 710
9
votes
4
replies
5.6k
views
How to analyse normalized read count?
RNA-Seq
R
updated 16 months ago by
Ram
43k • written 8.9 years ago by
pbio
▴ 150
9
votes
5
replies
503
views
Annotation of Complex Heatmap
complexheatmap
3 months ago by
abiuma
▴ 30
8
votes
6
replies
2.6k
views
for low coverage RNAseq how many reads assigned is the bare minimum for differential gene expression analysis
RNA-Seq
5.2 years ago by
senowinski
▴ 30
8
votes
5
replies
12k
views
samtools tview symbols
samtools
updated 18 months ago by
Ram
43k • written 8.8 years ago by
biolab
★ 1.4k
8
votes
4
replies
15k
views
Use of if-else statement in snakemake rule
snakemake
if-else
python
updated 4.5 years ago by
schroder.julia
• 0 • written 6.8 years ago by
Jokhe
▴ 140
8
votes
12
replies
4.3k
views
Use BLAST Command Line Applications to run a folder of many sequences against a database
BLAST
updated 13 months ago by
Ram
43k • written 2.7 years ago by
daver.v
▴ 30
8
votes
17
replies
4.0k
views
Getting nan value in vcftool relatedness command?
vcftools
relatedness
6.2 years ago by
Sharon
▴ 610
8
votes
5
replies
833
views
Frustrated with DEA results
microarray
differential-expression
updated 7 months ago by
dsull
★ 6.0k • written 7 months ago by
jopadrosa
• 0
8
votes
9
replies
1.5k
views
6 follow
Featurecount is 0 while TPM is 6289.54
TPM
Count
Feature
2.4 years ago by
zhangmeng21
▴ 10
8
votes
14
replies
2.4k
views
6 follow
Definition of "=" in comparing two genes
sequencing
gene
updated 2.5 years ago by
Ram
43k • written 9.8 years ago by
rdorey
• 0
8
votes
11
replies
2.7k
views
directionality of RRBS
directional
non-directional
RRBS
updated 2.8 years ago by
Papyrus
★ 2.9k • written 2.9 years ago by
basuanubhav
▴ 140
8
votes
13
replies
2.4k
views
Issue about install Cutadapt in ubuntu1404
cutadapt
7.1 years ago by
Joe
▴ 30
8
votes
1
reply
8.6k
views
Correlation heatmaps: use correlation as clustering distance or not?
heatmap
RNA-Seq
clustering
5.0 years ago by
CuriousGuy
▴ 90
8
votes
4
replies
2.2k
views
Use Of Terms In Genome-Wide Analysis: Phenotype / Functionality / Fitness
12.8 years ago by
2184687-1231-83-
★ 5.1k
8
votes
5
replies
3.6k
views
Is it possible to guess sequencing platform used based on a FASTQ/BAM file?
BAM
FASTQ
updated 16 months ago by
Ram
43k • written 8.9 years ago by
Andrew
▴ 60
8
votes
7
replies
1.5k
views
Splitting the overall RNA-seq data
RNA-Seq
6.9 years ago by
aeserrano
▴ 40
8
votes
10
replies
2.0k
views
FASTA of translated amino acid sequences in their six reading frames, which one is the optimal?
aminoacid
protein
peptide
Reading
optimal
frames
2.8 years ago by
Luis999
▴ 20
8
votes
11
replies
4.9k
views
Increasing kmer limit in SPAdes
Assembly
Bacterial
Spades
Velvet
7.8 years ago by
rrcutler
▴ 120
8
votes
11
replies
5.8k
views
RNASeq gender identification
RNA-Seq
6.7 years ago by
popayekid55
▴ 110
8
votes
25
replies
3.0k
views
construction of a database
sql
noSQL
neo4j
database
updated 13 months ago by
Ram
43k • written 3.0 years ago by
Debut
▴ 20
8
votes
11
replies
1.9k
views
Sending files to Galaxy
Galaxy
fastq
7.6 years ago by
statfa
▴ 760
8
votes
4
replies
2.4k
views
Global Sequence Alignment
alignment
11.0 years ago by
behrang
• 0
8
votes
5
replies
1.0k
views
Why could we infer a physical time scale (e.g. a billion year) from a phylogenetic analysis?
phylogeny
phylogenetic tree
4.5 years ago by
johnnytam100
▴ 110
8
votes
11
replies
2.0k
views
using STAR instead of HISAT2
STAR
updated 21 months ago by
Ram
43k • written 21 months ago by
Chris
▴ 260
8
votes
3
replies
1.2k
views
Package installation error using Bioconda
antismash
Bioconda
17 months ago by
A_heath
▴ 160
8
votes
9
replies
3.0k
views
6 follow
Big difference in estimated duplicate reads between forward and reverse of paired-end RNA-seq
RNA-Seq
duplication
fastqc
updated 22 months ago by
rohitsatyam102
▴ 850 • written 4.5 years ago by
Eric Lim
★ 2.1k
8
votes
8
replies
2.5k
views
6 follow
Blast Is Giving Me A Result Totally Unrelated To The Gene I Expect
blast
primer
updated 10.9 years ago by
Biostar
20 • written 11.0 years ago by
r.a.konrad
• 0
1,000 results • Page
4 of 20
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