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29
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17
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2.3k
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6 follow
Forum: Can Biostars use question template like Github issue/PR?
meta biostars template
updated 12 months ago by 43k • written 7.2 years ago by 8.5k
13
votes
17
replies
4.9k
views
8 follow
Forum: A Universal/Common Biorep System
reputation
updated 14 months ago by 43k • written 10.4 years ago by 20k
17
votes
17
replies
2.0k
views
6 follow
Forum: Journal for beginners
journal
updated 11 months ago by 43k • written 6.1 years ago by ▴ 20
42
votes
17
replies
38k
views
15 follow
Forum: List Of Genome Sequencing Centers/Institutes
genomics institutes
updated 14 months ago by 43k • written 11.2 years ago by 19k
27
votes
17
replies
5.1k
views
Forum: Data sharing via Bittorrent is coming to Biostar
biostars bittorrent
updated 14 months ago by 43k • written 9.8 years ago by 100k
13
votes
17
replies
4.2k
views
6 follow
Forum: Advice for undergraduate bioinformatics learners
advice
updated 21 months ago by 43k • written 8.4 years ago by ▴ 10
20
votes
17
replies
3.8k
views
Forum: Biostar Ads Are Here! Showcase Your Accomplishments To The World!
biostars
updated 14 months ago by 43k • written 10.9 years ago by 100k
61
votes
16
replies
8.1k
views
14 follow
Forum: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
library
updated 16 months ago by ★ 1.3k • written 3.6 years ago by 8.5k
54
votes
16
replies
5.7k
views
13 follow
Forum: The new era of bioinformatics: simple and fast tools, fewer and more informative data
kallisto computational-cost
updated 15 months ago by 43k • written 9.0 years ago by 100k
29
votes
16
replies
3.2k
views
Forum: Making bioinformatics help and tutorials open
ensembl
updated 14 months ago by 43k • written 9.7 years ago by 23k
20
votes
16
replies
3.5k
views
Forum: Blacklist of questionable genbank entries
genbank gi stealth-virus blacklist
updated 14 months ago by 43k • written 10.0 years ago by 54k
37
votes
16
replies
4.0k
views
9 follow
Forum: Sanger sequencing is no longer the gold standard?
Sanger NGS
updated 11 months ago by 43k • written 6.5 years ago by ▴ 220
15
votes
16
replies
1.9k
views
Forum: Modernising the FASTQ Format
FASTA Efficiency FASTQ
updated 12 months ago by 43k • written 7.2 years ago by ▴ 520
21
votes
16
replies
3.2k
views
9 follow
Forum: Limit Upvotes Over A Certain Amount Of Hours
meta biostars
updated 14 months ago by 43k • written 11.3 years ago by ★ 3.6k
43
votes
16
replies
4.6k
views
10 follow
Forum: Need Advice On How To Become A Senior Bioinformatician
advice career
updated 14 months ago by 43k • written 11.0 years ago by ▴ 30
10
votes
16
replies
2.2k
views
Forum: Guide for posting better questions
meta
updated 13 months ago by 43k • written 7.7 years ago by 9.7k
51
votes
16
replies
5.9k
views
11 follow
Forum: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2011?
papers
updated 15 months ago by 43k • written 12.4 years ago by ★ 2.9k
18
votes
16
replies
1.8k
views
Forum: Why are people not working on gene prioritization and candidate gene selection for new experiment design?
gene-prioritization
updated 11 months ago by 43k • written 5.6 years ago by ▴ 20
6
votes
16
replies
7.1k
views
6 follow
Forum: Immune repertoire sequencing community
sequencing repseq immunology tcr ig
updated 2.2 years ago by 43k • written 9.8 years ago by 3.5k
14
votes
16
replies
5.0k
views
8 follow
Forum: Yet Another Programming Language
Rust Julia
updated 11 months ago by 43k • written 6.8 years ago by 9.7k
55
votes
16
replies
6.0k
views
8 follow
Forum: Mission Impossible: you have 1 minute to analyze the Ebola Genome
ebola mission-impossible
updated 19 months ago by 43k • written 9.5 years ago by 100k
22
votes
16
replies
7.1k
views
9 follow
Forum: Large Tables In Supplementary Pdf In Journal Articles
publication
updated 14 months ago by 43k • written 10.9 years ago by ▴ 520
31
votes
16
replies
2.2k
views
8 follow
Forum: What is in your opinion the current state-of-the-art sequencing platform for genomic assembly (Nov 2019)
next-gen-sequencing assembly genome
updated 11 months ago by 43k • written 4.5 years ago by ★ 5.1k
24
votes
16
replies
2.3k
views
6 follow
Forum: #saveNCBI - it's a joke, right?
ncbi
updated 22 months ago by 43k • written 8.2 years ago by 11k
32
votes
16
replies
12k
views
9 follow
Forum: How to switch from bench research to computational biology?
career
updated 22 months ago by 43k • written 9.2 years ago by ▴ 70
30
votes
16
replies
2.2k
views
9 follow
Forum: Which programming langauge shall I start as a beginner in Bioinformatics
programming-language single-cell
updated 11 months ago by 43k • written 4.0 years ago by • 0
16
votes
15
replies
6.3k
views
Forum: Would You Be Interested In Having A Usesthis Like Site For The Bioinformatics Community?
hardware software
updated 14 months ago by 43k • written 10.1 years ago by ▴ 920
12
votes
15
replies
2.3k
views
6 follow
Forum: Opinion: Bioinformatician - What comes first? Biology vs Informatics.
informatics biology knowledge
updated 12 months ago by 43k • written 7.2 years ago by ★ 2.7k
8
votes
15
replies
2.4k
views
7 follow
Forum: How to identify your analytic data is true?
RNA-Seq ChIP-Seq next-gen-sequencing
updated 11 months ago by 43k • written 6.7 years ago by ▴ 80
57
votes
15
replies
4.8k
views
9 follow
Forum: Entice Biologists To Learn R
r
updated 14 months ago by 43k • written 12.6 years ago by 5.3k
20
votes
15
replies
6.8k
views
Forum: How To Analyze Your Own Exome
exome filtering analysis vcf variant
updated 3.1 years ago by 43k • written 10.7 years ago by ▴ 130
10
votes
15
replies
2.1k
views
Forum: How should reference genome fasta files be distributed by UCSC?
reference-genome fasta freeze ucsc-genome-browser
updated 11 months ago by 22k • written 14 months ago by ★ 1.6k
19
votes
15
replies
2.0k
views
6 follow
Forum: Cross out line in Biostars
meta
updated 11 months ago by 43k • written 6.0 years ago by 5.3k
24
votes
15
replies
2.0k
views
Forum: Users of 0 rep required to read etiquette guides before first post?
meta
updated 13 months ago by 43k • written 8.2 years ago by 13k
23
votes
15
replies
3.7k
views
6 follow
Forum: Explaining purpose of using FastQC to a colleague
fastqc
updated 12 months ago by 43k • written 7.3 years ago by ▴ 810
23
votes
15
replies
5.1k
views
6 follow
Forum: On the usage of Golang
assembly next-gen alignment
updated 11 months ago by 43k • written 5.6 years ago by ▴ 80
24
votes
15
replies
11k
views
11 follow
Forum: PhD in bioinformatics or biostatistics as a wet-lab scientist?
biology statistics PhD
updated 14 months ago by 43k • written 9.7 years ago by ▴ 70
28
votes
15
replies
4.5k
views
8 follow
Forum: Anyone Use R For Their Bioinformatics Work?
r
updated 14 months ago by 43k • written 10.5 years ago by ▴ 320
7
votes
15
replies
2.9k
views
Forum: Masters in Bioinformatics
ChIP-Seq genome next-gen R RNA-Seq
updated 2.1 years ago by 43k • written 9.4 years ago by • 0
22
votes
15
replies
8.9k
views
11 follow
Forum: RNASeq user experience with Novogene?
RNA-Seq
updated 11 months ago by 43k • written 5.9 years ago by ▴ 80
8
votes
15
replies
4.1k
views
Forum: Can Galaxy Be Used Under The Hood? How About The Galaxy Appliance?
galaxy
updated 14 months ago by 43k • written 10.8 years ago by 11k
23
votes
15
replies
2.5k
views
10 follow
Forum: I'm in a Masters of Bioinformatics Program and wanted to ask everyone for advice
career
updated 13 months ago by 43k • written 8.1 years ago by ▴ 20
21
votes
15
replies
2.1k
views
9 follow
Forum: Working abroad without a PhD
career
updated 11 months ago by 43k • written 4.6 years ago by ★ 1.4k
13
votes
15
replies
2.2k
views
Forum: Posting questions on Biostars without Googling or a preliminary Literature search
meta biostars
updated 13 months ago by 43k • written 7.5 years ago by ★ 1.5k
57
votes
15
replies
6.3k
views
9 follow
Forum: Good practices while dealing with very large datasets
Big-Data Programming
updated 12 months ago by 43k • written 7.0 years ago by ★ 1.2k
6
votes
15
replies
1.7k
views
Forum: PhD Bioinformatics on GWAS
SNP GWAS genome PHD
updated 11 months ago by 43k • written 4.3 years ago by ▴ 50
42
votes
15
replies
7.8k
views
8 follow
Forum: Directions In Bioinformatics And Web-Based Data Visualization: Revisiting Javascript?
data-visualization python r
updated 14 months ago by 43k • written 11.5 years ago by 5.8k
28
votes
15
replies
2.3k
views
12 follow
Forum: Should bioinformaticians learn the scientific names of plants and animals?
sequence
updated 11 months ago by 43k • written 5.8 years ago by ▴ 10
13
votes
15
replies
3.4k
views
8 follow
Forum: Biostar under spam attack - restrictions added to post content and title
meta biostars
updated 14 months ago by 43k • written 8.8 years ago by 100k
28
votes
14
replies
8.4k
views
8 follow
Forum: Should I work first in a Bioinformatics company or get a Ph. D.?
Biochemistry PhD career
updated 13 months ago by 43k • written 8.0 years ago by ▴ 20
1,000 results • Page 4 of 20
Recent Votes
Comment: anRichment is missing
Comment: Gene Specific coverage from WGS data
Comment: Gene Specific coverage from WGS data
Comment: High Malat-1 expression in single cell data
A: Meme-Tools: Bit score
Meme-Tools: Bit score
Meme-Tools: Bit score
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Recent Replies
Comment: anRichment is missing by GenoMax 142k
Consider emailing Dr. Horvath about this. Until enough people make him aware of this issue WGCNA "problem" is unlikely to get fixed.
Comment: anRichment is missing by Tatyana • 0
Unfortunately, there are only tutorials and codes for tutorials for WGCNA, not installation files for any their packages... :(
Comment: anRichment is missing by GenoMax 142k
See this link for the WGCNA documentation and code from Peter Langfelder : https://bioinformatics.stackexchange.com/questions/21885/where-t…
Comment: anRichment is missing by Tatyana • 0
The problem is back, Horwath's lab web is down again. Is it possible to get anRichment istallation file somewhere? (The greater problem is …
Comment: 16S rRNA microbiome differential abundance analysis with DESeq2 finds same micro by andres.firrincieli 3.6k
1. Maribaculaceae is a family not a genus 2. Who said that ASV with the same taxonomic classification must have the same behaviour? 3. With…
Comment: Question regarding WGCNA by andres.firrincieli 3.6k
the within-group variability is so small that these look like technical replicates rather than independent biological replicates
Answer: Gene ontology and homologs by geneontologyhelp ▴ 390
No. Homology is defined as shared common ancestry. Two genes that take part in the same biological process may not have the same functio…
Answer: error in R code by Matthias Zepper 4.6k
I quickly googled [the source code of that function][1], and the error is triggered by this condition: if(length(wn) < 1 || !is.whol…
Comment: Clarification regarding SAM flags "mate reverse strand" (flag 16/0x10) and "read by kalavattam ▴ 190
Thanks for the explanation. I noticed and corrected a typo in which "*read* reverse strand" initially read as "*mate* reverse strand" in t…
Comment: Spike-in control found in raw reads (16S amplicon seq) but not picked up by DADA by sovrappensiero ▴ 90
It's a commercial product, a *Staphylococcus hominis* genome. This species is not found in the DADA2 results, so I guess DADA2 is not ident…
Comment: Question regarding WGCNA by Ram 43k
Plots are incomplete without legends. Please share the complete plot with mappings for shape and color.
Comment: Quetion regarding WGCNA by deepak • 0
Thank you for your reply andres.firrincieli. I have attached the PCA plot of the expression data used in the WGCNA. ![enter imag…
Comment: Design matrix Differential expression analysis by SHN ▴ 40
Got it, thank you for your response. SN
Comment: How to interpret DEXseq results in therms of significance by Sara ▴ 30
Hi, I used write.table(as.data.frame(DEXSeqResults(MyObj)), "Results.tsv", quote=FALSE, sep="\t", dec=".") to save the result but I recei…
Comment: Tissue-specific DEG analysis with DEseq2 by M. ▴ 30
Can I ask what do you exactly mean by same experiment? If you are talking about the same donor and the same procedure, unfortunately, not a…
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