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1,000 results • Page
3 of 20
Sort: Rank
Rank
Views
Votes
Replies
2
votes
2
replies
229
views
Server or aws cloud- which one is better for gatk pipeline
aws
server
calling
gatk
cloud
updated 4 days ago by
Michael
54k • written 5 days ago by
ashaneev07
▴ 20
1
vote
1
reply
441
views
ComBat_Seq stuck adjusting the data
Batch-Effect
RNAseq
ComBat-Seq
updated 4 days ago by
Jaïr
• 0 • written 4 months ago by
NorbertK
▴ 10
4
votes
3
replies
2.9k
views
How to solve the error 'ERROR::MATE_NOT_FOUND:Found xxx unpaired mates' when run SamToFastq
samtofasq
picard
validatesamfile
updated 4 days ago by
Pierre Lindenbaum
161k • written 5 days ago by
Lila M
★ 1.2k
2
votes
3
replies
211
views
Nextflow: how to get the process work dir, within the process
nextflow
updated 4 days ago by
Pierre Lindenbaum
161k • written 5 days ago by
ScottDansk
▴ 10
1
vote
0
replies
131
views
What is Deepvariant default filtering values ?
vcf
calling
filter
variant
deepvariant
5 days ago by
Shae
▴ 10
0
votes
1
reply
183
views
Enhanced Volcano-Cut off
foldchange
enhancedvolcano
updated 5 days ago by
marco.barr
▴ 110 • written 5 days ago by
odi
▴ 10
0
votes
6
replies
2.1k
views
Copy number Variation analysis using conumee
R
software error
sequencing
genome
updated 4 days ago by
GenoMax
142k • written 3.2 years ago by
gs000095
▴ 10
1
vote
1
reply
150
views
Conda severely broken after attempting mamba install
biopython
conda
mamba
pycosat
updated 5 days ago by
andres.firrincieli
3.6k • written 5 days ago by
kacollier
▴ 30
1
vote
2
replies
1.7k
views
Seurat CellCycleScoring – confused about the proper order of operations when using SCTransform
CellCycleScoring
SCTransform
Seurat
updated 5 days ago by
Li
• 0 • written 2.3 years ago by
GPM
▴ 10
0
votes
0
replies
113
views
Summary Statistics SNPs not found in Target data
SNP
plink
PRS
updated 5 days ago by
Ram
43k • written 5 days ago by
curious_butterfly
• 0
1
vote
4
replies
324
views
Contig assembly task, errors
dna
genetics
contig
assembly
updated 12 hours ago by
Ram
43k • written 5 days ago by
samRayne
• 0
1
vote
3
replies
240
views
Help with Biopython for Beginner
Python
ORF
FASTA
Biopython
updated 4 days ago by
GenoMax
142k • written 5 days ago by
cput
• 0
0
votes
0
replies
115
views
Annotate VCF via VEP for gnomAD annotation considering FILTER column
vep
vcf
gnomad
5 days ago by
asalimih
▴ 60
0
votes
9
replies
1.5k
views
kinannote software installation problems
kinannote
updated 5 days ago by
Emanoelle
• 0 • written 5.7 years ago by
Elizabeth
▴ 30
0
votes
2
replies
214
views
Obtaining Infinium Methylation450K manifest for hg38
TCGA
hg38
methylation
Illumina
updated 1 day ago by
Zhenyu Zhang
★ 1.2k • written 5 days ago by
elisheva
▴ 120
0
votes
0
replies
102
views
Pathway analysis of Bacteria from denovo genome assembly
KEGG-KASS
WGS
Pathway
denovo
updated 5 days ago by
Ram
43k • written 5 days ago by
mathavanbioinfo
▴ 90
1
vote
1
reply
274
views
Seurat V5 integration
Seurat
integration
updated 5 days ago by
Ram
43k • written 9 days ago by
starswillfade
▴ 10
0
votes
2
replies
219
views
Error in plotting PCA plot in seurat
PCA
single-cell
seurat
scRNA
RNA
updated 5 days ago by
Ram
43k • written 6 days ago by
Sumeet
• 0
0
votes
0
replies
118
views
News:
Online course: Introduction to Deep Learning
Python
Deep-Learning
Convolutional-Neural-Network
Machine-Learning
updated 5 days ago by
Ram
43k • written 5 days ago by
carlopecoraro2
★ 2.5k
4
votes
5
replies
3.4k
views
How to compare compare two Sam files to check mapping
alignment
updated 5 days ago by
DavidStreid
▴ 90 • written 6.4 years ago by
madhu.9124
▴ 60
0
votes
2
replies
156
views
How/where can I get fungal mitogenome data for analysis?
fungal
mitogenome
updated 5 days ago by
GenoMax
142k • written 5 days ago by
madders73
• 0
4
votes
2
replies
259
views
How can I analyze normalized expression data?
DEseq2
RNA-seq
5 days ago by
mnx0723
• 0
3
votes
4
replies
4.0k
views
FarmCPU - how to explain the reported 'effect'?
gwas
updated 5 days ago by
chloek88
• 0 • written 5.5 years ago by
Philipp Bayer
8.5k
4
votes
6
replies
399
views
RNA seq analysis
DESeq
RNA-seq
updated 21 hours ago by
Matthias Zepper
4.6k • written 5 days ago by
prifa
▴ 10
10
votes
3
replies
311
views
TFs and Gene databases
Transcription-factor
Target
Regulatory-Networks
updated 5 days ago by
b.contreras.moreira
▴ 180 • written 6 days ago by
ijarne
• 0
0
votes
0
replies
142
views
Chance for trained without experience
bio
updated 5 days ago by
ATpoint
82k • written 5 days ago by
shehab
• 0
1
vote
2
replies
191
views
How do I change the title font size in ViolinPlot (Seurat)
Seurat
Violin-Plot
ggplot2
patchwork
6 days ago by
Assa Yeroslaviz
★ 1.8k
0
votes
0
replies
119
views
Xenium multi sample data
batch
annotation
cell
Xenium
effect
6 days ago by
Omics data mining
▴ 260
0
votes
2
replies
179
views
Phasing a mixture of two individuals' DNA with long reads
long-reads
phasing
5 days ago by
njornet
▴ 20
0
votes
2
replies
205
views
Exploring Diet Effects in Single-Cell RNA Sequencing
batch_effect
scRNA
seurat
integration
updated 5 days ago by
Adam
▴ 30 • written 6 days ago by
Darya
• 0
0
votes
5
replies
255
views
Percentage coverage of reference genome by de novo genome
SAMtools
BWA
alignment
ddRAD
updated 5 days ago by
Joe
21k • written 6 days ago by
Lemonhope
• 0
0
votes
0
replies
174
views
Why does my Hi-C contact map show large regions making little to no contact?
BWA-MEM2
Hi-C
PretextMap
5 days ago by
Winter
• 0
0
votes
5
replies
304
views
A question about reference genome for creating the consensus sequence
fasta
fa
cram
genome
5 days ago by
me
• 0
2
votes
1
reply
139
views
java out of memory error through beagle for imutation
beagle
java.out.of.memory
imputation
6 days ago by
analyst
▴ 50
0
votes
0
replies
84
views
Blog:
Introduction to The Complete Sequence of a Human Genome
biotech
6 days ago by
usa.cd.genomics
• 0
0
votes
0
replies
93
views
Blog:
Overview of Nanopore Sequencing
biotech
6 days ago by
usa.cd.genomics
• 0
0
votes
0
replies
102
views
meffil.snp.concordance
meffil
methylation
snp_concordance
6 days ago by
kyj222637
• 0
0
votes
1
reply
150
views
PseudobulkExpression.Seurat error
Seurat
pseudo-bulk
updated 5 days ago by
Bastien Hervé
5.3k • written 6 days ago by
sooni
▴ 20
1
vote
5
replies
427
views
HCL database download
HCL
updated 6 days ago by
Ram
43k • written 10 days ago by
sooni
▴ 20
0
votes
1
reply
251
views
barcode of TCR-sequencing
barcode
updated 6 days ago by
mizraelson
▴ 60 • written 13 days ago by
yueli7
▴ 250
1
vote
3
replies
242
views
STAR aligner error
RNA-seq
STAR
slurm
updated 5 days ago by
Ram
43k • written 6 days ago by
M.
▴ 30
0
votes
0
replies
97
views
monocle 3-- Could not get node in small cluster
monocle3
6 days ago by
synat.keam
▴ 100
0
votes
2
replies
204
views
Correlating Bulk Differential Expression with quantitative
Differential-Expression
DESeq2
5 days ago by
Nicholas
• 0
1
vote
4
replies
373
views
Understanding STAR output (Aligned.out.sam file)
STAR
paired-end
read
6 days ago by
heelpPlease
• 0
0
votes
7
replies
495
views
Applying the metacell2 algorithm using python
python
single-cell
scanpy
metacell2
updated 5 days ago by
Wayne
★ 2.0k • written 7 days ago by
JACKY
▴ 140
0
votes
0
replies
114
views
News:
Online course. -Time series analysis and Forecasting in R
Time-Series
Forecasting
R
Stastics
6 days ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
470
views
HLA-HD tool for genomic imputation
genomics
imputation
bash
updated 6 days ago by
Javier
• 0 • written 3 months ago by
fra.r.silvestro
▴ 10
0
votes
1
reply
250
views
ERROR: Duplicate entry "..." in sam header; samtools view: failed to add PG line to the header
sort.
SAMtools.
BAM.
SAM.
updated 6 days ago by
GenoMax
142k • written 6 days ago by
Sony
▴ 10
5
votes
5
replies
291
views
Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent
EGSEA
6 days ago by
Chris
▴ 280
0
votes
2
replies
215
views
Differentail gene expression results
differential
expression
gene
rna-seq
Deseq2
updated 5 days ago by
swbarnes2
14k • written 6 days ago by
ahmad.sajad4541
• 0
1,000 results • Page
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Answer: How to interpret infinite odds ratio?
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Comment: What does the 'E%' represent in BUSCO results?
Answer: What does the 'E%' represent in BUSCO results?
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Comment: Galaxy StringTie error
by
trkfs
• 0
Hi, I did not encounter any " \ - " characters in the fastq input files, and it doesn't seem to be present in any other files either. Thank…
Comment: How to interpret infinite odds ratio?
by
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• 0
Thanks you for your answer. But according that links interpretation of inf odds ratio is up to hypothesis of the researcher.So my solution …
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Not found in https://ftp.sanger.ac.uk/resources/software/gwava/ ![][1] [1]: /media/images/f69695ec-e047-44f6-95ce-cd4edf1c
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Hi, I kind of did and kind of didn't: I stopped trying to use snakemake( I remember that it's a lot of hustle to install pickard, maybe you…
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Hi, you can add the labels outside chart using `geom_label_repel` from `ggrepel` package. Check out this guide [https://r-charts.com/part…
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