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News: Course - FLOW CYTOMETRY ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometry R
updated 4 months ago by ▴ 70 • written 5 months ago by ★ 2.3k
8
votes
6
replies
1.2k
views
News: Illumina to Acquire Pacific Biosciences
pacbio illumina
updated 6 days ago by 39k • written 4.6 years ago by 98k
32
votes
6
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13k
views
7 follow
News: Ncbi Releases Entrez Direct, The Entrez Utilities On The Unix Command Line
ncbi genbank pubmed command-line entrez
updated 3 months ago by 39k • written 9.3 years ago by 154k
2
votes
6
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2.4k
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News: Master in integrated systems biology / Luxembourg
systems-biology Masters-course
updated 16 days ago by 39k • written 5.9 years ago by ▴ 130
8
votes
6
replies
16k
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News: Bioinformatics PhD Programs in the US
education PhD
updated 14 days ago by 39k • written 5.5 years ago by ▴ 70
4
votes
5
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2.5k
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News: Kover will provide support via Biostars
kmer kover machine-learning
updated 7 weeks ago by 39k • written 7.0 years ago by ▴ 90
7
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5
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2.3k
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News: Physalia-Course: Introduction to Linux and workflows for biologists (Berlin)
next-gen Unix Assembly alignment
updated 20 days ago by 39k • written 6.2 years ago by ★ 2.3k
33
votes
5
replies
3.4k
views
News: FINAL CALL: Epigenetics Workshop - DNA Methylation Data Analysis (some last seats available)
Epigenetics Workshop Bisulfite-Sequencing
updated 7 weeks ago by 39k • written 7.0 years ago by ▴ 460
0
votes
5
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1.8k
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News: Ashg 2012 Biostar Meetup
ASHG
updated 3 months ago by 39k • written 10.6 years ago by 12k
0
votes
5
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1.4k
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News: LAST CALL - 'Introduction to NGS Data Analysis' course in Berlin, October 8-10 2018
NGS training RNA-Seq DNA-Seq
updated 7 days ago by 39k • written 5.0 years ago by 9.9k
9
votes
5
replies
8.2k
views
News: A New Rest Based Api For Kegg: Kyoto Encyclopedia Of Genes And Genomes
kegg api
updated 3 months ago by 39k • written 10.5 years ago by ▴ 50
9
votes
5
replies
3.3k
views
News: SAMTOOLS 1.4 released
samtools
updated 21 days ago by 39k • written 6.2 years ago by 154k
0
votes
5
replies
2.4k
views
News: Workshop: Data manipulation and visualization with Python
next-gen genome SNP sequence
updated 7 weeks ago by 39k • written 6.5 years ago by ★ 2.3k
14
votes
5
replies
3.0k
views
News: Science Article On Social Influence Bias On Voting Patterns ("Herding") With Impact On Biostar.
meta biostars
updated 3 months ago by 39k • written 9.8 years ago by 52k
3
votes
5
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2.0k
views
News: Published: GeneSCF: a real-time based functional enrichment tool with support for multiple organisms
kegg gene-enrichment cancer gene-ontology
updated 7 weeks ago by 39k • written 6.7 years ago by 7.5k
6
votes
5
replies
4.8k
views
News: NCBI MagicBlast ( Short read mapper )
blast ncbi short-read mapper hts
updated 7 weeks ago by 39k • written 6.7 years ago by 154k
9
votes
5
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9.7k
views
8 follow
News: Online course: Learn Bioinformatics in 100 hours
biostars online-course
updated 3 months ago by 39k • written 5.8 years ago by 98k
1
vote
5
replies
756
views
News: Cancer Genomics course - 2 seats left
Genomics Cancer-Genomics R
updated 3 months ago by 39k • written 4 months ago by ★ 2.3k
1
vote
4
replies
1.5k
views
News: Bioconductor Development Visualization
bioconductor
updated 10 months ago by 39k • written 8.1 years ago by 26k
10
votes
4
replies
678
views
News: Good morning
good morning
updated 8 months ago by 98k • written 8 months ago by 85k
5
votes
4
replies
1.7k
views
News: 2nd International Conference on Pediatric Oncology and Pediatric Medicine
gene
updated 6 weeks ago by 39k • written 6.2 years ago by • 0
6
votes
4
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4.0k
views
News: awesome-single-cell: a list of open-source single-cell analysis software and workshop materials
single-cell RNA-Seq
updated 7 weeks ago by 39k • written 6.9 years ago by 26k
4
votes
4
replies
1.4k
views
News: VCFclin working group
vcfclin
updated 12 weeks ago by 39k • written 9.1 years ago by ▴ 30
10
votes
4
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1.5k
views
News: 3rd Berlin Summer School in NGS Data Analysis (2 seats just became available)
NGS RNA-Seq DNA-Seq
updated 5 days ago by 39k • written 4.4 years ago by 9.9k
12
votes
4
replies
1.7k
views
News: #NGSchool2018 summer school in bioinformatics
NGSchool Personalised-Medicine Nanopore
updated 8 days ago by 39k • written 5.0 years ago by ▴ 290
0
votes
4
replies
553
views
News: Ensembl Release 104 and newer GTF files no longer have genes sorted by position
Ensembl GTF
updated 5 months ago by ★ 2.2k • written 6 months ago by ▴ 10
8
votes
4
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1.6k
views
News: supporting vg users on biostars
vg graph vgteam genome News variation
updated 5 months ago by 4.8k • written 3.7 years ago by ★ 2.4k
15
votes
4
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4.1k
views
News: Workshop: Genomic Data Visualization and Interpretation (Berlin, Germany)
dataviz GenVisR next-gen R
updated 6 weeks ago by 39k • written 6.2 years ago by ★ 2.3k
4
votes
4
replies
2.7k
views
News: Join The Dnanexus Developer Program
api cloud
updated 3 months ago by 39k • written 10.0 years ago by ▴ 30
31
votes
4
replies
6.2k
views
News: Rosalind: A Novel Bioinformatics Education Platform
education
updated 3 months ago by 39k • written 10.7 years ago by ▴ 310
0
votes
4
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1.8k
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News: What NGS courses would you like us to prepare for 2016? (one week left)
NGS Survey Workshop
updated 9 months ago by 39k • written 7.5 years ago by 9.9k
7
votes
4
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2.4k
views
News: Boston Ma Us Area Folks: Software Carpentry Workshop For Women In Science Coming Up
python training
updated 3 months ago by 39k • written 10.1 years ago by 11k
1
vote
4
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1.3k
views
News: Spring School for RNA-seq Sequence Analysis
RNA-Seq genome sequence sequencing
updated 6 weeks ago by 39k • written 6.3 years ago by ▴ 10
1
vote
4
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1.8k
views
News: webserver of TCGA data www.tcgaportal.org
genome RNA-Seq TCGA gene
updated 8 days ago by 39k • written 5.0 years ago by ▴ 40
10
votes
4
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742
views
News: RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS transcriptomics workshop
updated 10 weeks ago by ▴ 30 • written 3 months ago by 9.9k
9
votes
4
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1.3k
views
News: Human Cell Atlas Data Coordination Platform Data Release Questionaire
RNA-Seq
updated 12 days ago by 39k • written 5.3 years ago by ★ 1.8k
6
votes
4
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1.4k
views
News: Genomic variation course at the EBI - Updated
Ensembl 1000Genomes snps variation
updated 8 weeks ago by 39k • written 7.2 years ago by 23k
2
votes
4
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1.7k
views
News: Reminder: Igb Tutorial Starts In 30 Minutes
visualization genome-browser RNA-seq
updated 3 months ago by 39k • written 9.7 years ago by ★ 2.3k
4
votes
4
replies
1.6k
views
News: 12th International Conference on Advancements in Bioinformatics and Drug Discovery
genome Computational-Biology
updated 9 days ago by 39k • written 5.1 years ago by ▴ 20
15
votes
4
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2.3k
views
News: Call For Nominations: 2013 Benjamin Franklin Award
benjamin-franklin-award award
updated 3 months ago by 39k • written 10.3 years ago by 154k
3
votes
4
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2.1k
views
News: Training in Metagenomics Data Analysis @NIH, USA, Nov 14 - 17, 2017
metagenomics microbiome training
updated 7 weeks ago by 39k • written 6.6 years ago by ▴ 130
19
votes
4
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2.1k
views
News: How to analyze NGS data: An overview of nine different IT solutions
NGS RNA-Seq DNA-Seq
updated 7 weeks ago by 39k • written 6.6 years ago by 9.9k
14
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4
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3.1k
views
News: FULL: NGS Data Analysis Workshop for Beginners in Munich (29 June - 1 Juli 2016)
RNA-Seq next-gen NGS
updated 10 months ago by 39k • written 7.3 years ago by 9.9k
9
votes
4
replies
3.4k
views
News: Conference Announcement - Camda 2013
conference classification
updated 3 months ago by 39k • written 10.4 years ago by ▴ 240
4
votes
3
replies
3.0k
views
News: CAFE v4.0 available
phylogenetics CAFE
updated 20 days ago by 39k • written 6.2 years ago by ▴ 150
4
votes
3
replies
2.1k
views
News: India Recently Started Personal Genome Profiling, Commercially.
genome-profiling
updated 3 months ago by 39k • written 10.0 years ago by ▴ 970
6
votes
3
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2.2k
views
News: Become a Professional Biinformatician in NGS, Microarray in very fair price. Register for ArrayGen training program as soon as possible to get good a…
ChIP-Seq next-gen RNA-Seq
updated 6 weeks ago by 39k • written 6.3 years ago by • 0
3
votes
3
replies
2.1k
views
News: Innocentive Challenge: Identify Organisms From A Stream Of Dna Sequences And Get $1,000,000
ngs
updated 3 months ago by 39k • written 10.1 years ago by ▴ 830
7
votes
3
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4.2k
views
News: Pathway Commons 2 - Search And Visualize Public Biological Pathway Information. Single Point Of Access.
api cytoscape
updated 3 months ago by 39k • written 9.5 years ago by ★ 1.2k
4
votes
3
replies
1.8k
views
News: Proteomics and Genomics Submit your Research Journals
Research Genomics Journals Proteomics
updated 6 months ago by 39k • written 7.9 years ago by • 0
1,000 results • Page 2 of 20
Recent Votes
What ought to be the rate between methylated CpGs and CHX in RRBS ?
What ought to be the rate between methylated CpGs and CHX in RRBS ?
methylation coverage in the gene region
A: what's Validation stringency?
A: what's Validation stringency?
Comment: BioInformatics, Software
Answer: How to calculate kinship matrix table from vcf file
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Comment: DEGseq for multiple samples by Basti ★ 1.5k
Your post is badly formatted, you should enhance the presentation. I do not understand your question because you created geneExpMatrix1 and…
Answer: Single Cell Rna Seq Using BD Rhapsody by GenoMax 129k
See answer here: https://www.biostars.org/p/9562237/#9562240 I don't think you can do this on Galaxy.
Comment: how to run FacetsSuite wrapper scripts on command line by GenoMax 129k
The [link in your original post][1] has this bit of help --snp-pileup-path <path to snp-pileup executable> So the path you provide ne…
Comment: ggsave() bug in ggplot2? by barslmn ★ 1.5k
Can you run the command `file Figure1.jpg` and post the output?
Comment: PacBio Pipeline and Tools for Variant Call by Kiran ▴ 70
Hi William , Thank you for the explanation, From VCF should i omit variants with `"/"` and keep ones with phased `"|"` for further annotati…
Comment: My kernel is killing the pairtools dedup script, how to prevent that? by GenoMax 129k
Keep an eye on memory usage. Even though you have 256G it is possible that the process is running out of memory or temp (/tmp) space. Try r…
Answer: Understanding Used Assembly: Why aren't authors specific about patch version? by GenoMax 129k
You may have seen explanation of the patches from GRC --> ([**LINK**][1]). > The fact that patch-version does matter for looking up varian…
Comment: how to run FacetsSuite wrapper scripts on command line by Dalal • 0
I apologise for that. Unfortunately I am still left with the same error: > sh: 1: ~/mut_analysis/variant-calling/facets_cnv/: > Permission…
Comment: BioInformatics, Software by hashim.rana11 • 0
Thank you so much...
Comment: how to create correlation matrix R by satva72 • 0
great! thanks
Comment: BioInformatics, Software by barslmn ★ 1.5k
https://bio.tools/ is a great website indexing software used in bioinformatics.
Comment: BioInformatics, Software by Pierre Lindenbaum 154k
This is just too broad. what did you find so far ?
Answer: How to calculate kinship matrix table from vcf file by barslmn ★ 1.5k
You can use the vcftools relatedness2 module. Which implements the method describes in the paper: https://academic.oup.com/bioinformatics/a…
Answer: How to convert bed file to vcf? by Pierre Lindenbaum 154k
use AWK, change the header, body according to your needs... awk 'BEGIN {printf("##fileformat=VCFv4.2\n##INFO=<ID=END,Number=1,Type=I…
Comment: Doubt - installing LncTar software by Jeremiah • 0
It is the full result, there is only one lncRNA and one mRNA in Examp1, and the output file is just like web version reult
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