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24
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7
replies
4.1k
views
News: #Bioinformatics Crowdcoding
crowd-coding
updated 29 days ago by 38k • written 9.7 years ago by 153k
1
vote
0
replies
4.0k
views
News: Hands-On Training in RNA-seq Bioinformatics: A Practical Introduction - Mapping, Visualization, Basic Analyses
next-gen RNA-Seq workshop
updated 22 days ago by 38k • written 8.8 years ago by 9.9k
23
votes
7
replies
4.0k
views
News: Research accounts on GitHub
github git
updated 22 days ago by 38k • written 8.9 years ago by 153k
6
votes
4
replies
4.0k
views
News: awesome-single-cell: a list of open-source single-cell analysis software and workshop materials
single cell RNA-Seq News
6.8 years ago by Sean Davis 26k
15
votes
4
replies
3.9k
views
News: Workshop: Genomic Data Visualization and Interpretation (Berlin, Germany)
R next-gen dataviz GenVisR News
6.1 years ago by carlopecoraro2 ★ 2.3k
11
votes
1
reply
3.9k
views
News: GATB will provide developer support via Biostar
minia dsk gatb
updated 14 months ago by 38k • written 8.9 years ago by ★ 1.5k
1
vote
0
replies
3.7k
views
News: Workshop: Bioinformatics for Beginners, University of Maryland, College Park, USA
next-gen RNA-Seq workshop assembly
updated 7 weeks ago by 38k • written 7.9 years ago by ▴ 20
7
votes
8
replies
3.7k
views
News: Next-Gen Sequencing Tutorials On Cubelp (Cranfield Bioinformatics Electronic Learning Platform)
genome chip-seq snp assembly
updated 5 months ago by 38k • written 9.6 years ago by ▴ 610
8
votes
6
replies
3.7k
views
News: Last Call: Upcoming Workshop - Rna-Seq Bioinformatics: A Practical Introduction
RNA-seq
updated 4 weeks ago by 38k • written 10.2 years ago by 9.9k
6
votes
9
replies
3.6k
views
News: 1000 Genomes : The Initial Phase 3 variant list and phased genotypes.
1000genomes
updated 22 days ago by 38k • written 8.8 years ago by 153k
3
votes
3
replies
3.6k
views
News: A Tale Of Next Generation Sequencing Platforms: Ion Torrent, Pacific Biosciences And Illumina Miseq
sequencing
updated 5 weeks ago by 38k • written 10.6 years ago by 97k
27
votes
9
replies
3.6k
views
News: OSX 10.11 released 30th Sep will be "rootless"
mac osx
updated 6 months ago by 38k • written 7.5 years ago by 13k
3
votes
2
replies
3.5k
views
News: Course/Workshop: Informatics For Rna-Sequence Analysis (June, 2013)
RNA-seq
updated 4 weeks ago by 38k • written 10.2 years ago by 20k
7
votes
3
replies
3.5k
views
News: Visualizing genomic data: techniques and challenges. Our interview with Dr. Malachi Griffith, Dr. Obi Griffith and Mr. Zachary Skidmore (The Griffith…
RNA-Seq R NGSdata genome News
4.3 years ago by carlopecoraro2 ★ 2.3k
4
votes
0
replies
3.5k
views
News: RepurposeDB - A New Reference Database of Drug Repositioning
drug-repositioning precision medicine News
6.1 years ago by Khader Shameer 18k
0
votes
0
replies
3.5k
views
News: Journal Of Bioinformatics Research Studies- Call For Papers
publication biology
updated 22 days ago by 38k • written 9.0 years ago by • 0
8
votes
10
replies
3.5k
views
News: New versions of Minia and DSK (2.0.x)
minia dsk assembly gatb
updated 11 months ago by 38k • written 8.1 years ago by ★ 1.5k
59
votes
31
replies
3.4k
views
12 follow
News: Example of how bioinformaticians can publish in Scientific Reports (by nature publishing group) using publicly available NGS data
publication NGS News
updated 6.2 years ago by ▴ 50 • written 6.2 years ago by 9.9k
11
votes
2
replies
3.4k
views
News: Coursera: Computational Molecular Evolution
course
updated 4 weeks ago by 38k • written 9.9 years ago by 153k
5
votes
2
replies
3.4k
views
News: Tuesday 10/29 Live Tour Of New Features In Integrated Genome Browser 8
genome-browser RNA-seq ChIP-seq
updated 28 days ago by 38k • written 9.4 years ago by ★ 2.3k
6
votes
1
reply
3.4k
views
News: Symposium And Rna-Seq Data Analysis Workshop Charlotte May 13-14
RNA RNA-seq training
updated 22 days ago by 38k • written 9.0 years ago by ★ 2.3k
18
votes
11
replies
3.4k
views
News: Full Genome Sequencing Service 30x whole human genome sequencing for $3,490 (project cancelled)
genome next-gen-sequencing
updated 14 months ago by 38k • written 8.5 years ago by ▴ 100
9
votes
4
replies
3.4k
views
News: Conference Announcement - Camda 2013
conference classification
updated 4 weeks ago by 38k • written 10.2 years ago by ▴ 240
5
votes
1
reply
3.3k
views
News: Broad Gatk Haplotypecaller Speed Improved 2-4 X By Cooperation With Intel, And Incremental Multi-Sample Calling Made Possible!
gatk variant-calling
updated 23 days ago by 38k • written 9.0 years ago by ★ 5.2k
12
votes
7
replies
3.3k
views
News: Welcome Ensembl REST with more endpoints!
ensembl rest-api
updated 20 days ago by 38k • written 8.5 years ago by ★ 5.2k
33
votes
5
replies
3.3k
views
News: FINAL CALL: Epigenetics Workshop - DNA Methylation Data Analysis (some last seats available)
Workshop Epigenetics Bisulfite Sequencing News
updated 6.4 years ago by 9.9k • written 6.8 years ago by ▴ 460
14
votes
3
replies
3.3k
views
News: Updated: Conference/Symposium/Seminar/Workshop alert 2018-2019
bioinformatics symposium seminar conference News
updated 4.4 years ago by ▴ 260 • written 4.9 years ago by 5.7k
2
votes
0
replies
3.3k
views
News: Bioinformatics Open Days 2Nd Edition - 14 And 15 Of March, 2013 At The University Of Minho, Campus Gualtar, Braga, Portugal.
conference
updated 4 weeks ago by 38k • written 10.2 years ago by ▴ 20
9
votes
5
replies
3.3k
views
News: SAMTOOLS 1.4 released
samtools News
6.0 years ago by Pierre Lindenbaum 153k
51
votes
17
replies
3.2k
views
News: Biostars 3.0 is now under testing. It has groups, charms and other interesting features.
meta biostars
updated 6 weeks ago by 38k • written 8.0 years ago by 97k
12
votes
17
replies
3.2k
views
6 follow
News: A programming language for living cells [Cello]
dna language research sequence News
7.0 years ago by Sukhi Singh 11k
0
votes
1
reply
3.2k
views
News: Workshop: Introductory Population Genomics: From Data to Inference
SNP R next-gen News
6.4 years ago by carlopecoraro2 ★ 2.3k
17
votes
9
replies
3.2k
views
News: My Ncbi Curriculum Vitae Web Application: Sciencv
ncbi
updated 28 days ago by 38k • written 9.5 years ago by 153k
54
votes
24
replies
3.2k
views
12 follow
News: Big news from Microsoft. BASH on windows.
windows News
written 7.0 years ago by ★ 3.1k
1
vote
0
replies
3.2k
views
News: Command Line Bioinformatics and High-throughput Sequencing Analysis Course
training course
updated 15 months ago by 38k • written 8.6 years ago by 7.4k
2
votes
0
replies
3.2k
views
News: Synthetic DNA/RNA Spike-in standards for NGS
RNA-Seq assay spike-in News
6.6 years ago by GenoMax 127k
5
votes
2
replies
3.2k
views
News: Summary of AGBT 2015
AGBT2015 AGBT
updated 12 days ago by 38k • written 8.1 years ago by ▴ 640
10
votes
0
replies
3.2k
views
News: 1000 Genomes data on GRCh38
1000Genomes GRCh38 alts alignment
updated 7 months ago by 38k • written 7.5 years ago by ▴ 100
8
votes
1
reply
3.1k
views
News: LAST DAY TO REGISTER - NGS Workshop 2015: A Practical Introduction to NGS Data Analysis (Oxford, UK)
RNA-Seq workshop
updated 20 days ago by 38k • written 8.4 years ago by 9.9k
27
votes
7
replies
3.1k
views
News: The Biostar Swarm: A Visualization
biostars
updated 6 weeks ago by 38k • written 10.1 years ago by 97k
11
votes
0
replies
3.1k
views
News: BWA 0.7.11 is out, supports ALT contigs
BWA
updated 15 days ago by 38k • written 8.3 years ago by 103k
2
votes
0
replies
3.1k
views
News: Promoter Design Challenge: Design A Plant Promoter And We Will Construct It.
plant-promoter transcription-factor
updated 4 weeks ago by 38k • written 10.1 years ago by ▴ 20
12
votes
0
replies
3.1k
views
News: Looking For Feedback On The Json Output For Ncbi E-Utilities
ncbi eutils
updated 4 weeks ago by 38k • written 10.4 years ago by ▴ 360
10
votes
2
replies
3.0k
views
News: Biostars based Q&A for Bioconductor: http://support.bioconductor.org
RNA-Seq bioconductor
updated 14 months ago by 38k • written 8.5 years ago by 153k
1
vote
1
reply
3.0k
views
News: Course: STATISTICS FOR BIOLOGISTS USING R. 18-22 September (Berlin)
R statistics News
6.2 years ago by carlopecoraro2 ★ 2.3k
0
votes
2
replies
3.0k
views
News: Course: Practical GWAS using Linux and R. 23-27 October 2017, Berlin (Germany)
GWAS R Linux Bioinformatics News
5.6 years ago by carlopecoraro2 ★ 2.3k
7
votes
0
replies
3.0k
views
News: Ncbi E-Utilities Now Provides Output In Json Format (Einfo, Esearch, And Esummary Only, For Now)
ncbi format eutils entrez
updated 7 months ago by 38k • written 9.1 years ago by 153k
2
votes
0
replies
3.0k
views
News: "Practical GWAS Using Linux and R" Workshop
R Linux GWAS next-gen News
5.7 years ago by carlopecoraro2 ★ 2.3k
9
votes
3
replies
3.0k
views
News: New Human Genome Assembly (Grch38) Released
human-genome assembly
updated 27 days ago by 38k • written 9.3 years ago by 153k
14
votes
5
replies
3.0k
views
News: Science Article On Social Influence Bias On Voting Patterns ("Herding") With Impact On Biostar.
meta biostars
updated 6 weeks ago by 38k • written 9.6 years ago by 52k
1,000 results • Page 2 of 20
Recent Votes
Getting error in running GATK (GenomeAnalysisTK-3.7)?
Comment: Suggestion for approaching multiple conditions scRNA-seq
A: Vertebrate Subset Nr Database? Build My Own?
Vertebrate Subset Nr Database? Build My Own?
Why Are There Many Rna-Seq Hits To Intronic Regions?
Comment: Question on how to filter DESeq2 results correctly and use of the results functi
Answer: Question on how to filter DESeq2 results correctly and use of the results functi
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Comment: ClusterProfiler : What is GeneRatio and BgRatio? by Rene • 0
genes <- letters[1:15] gs_df <- data.frame("gs_name"=c(rep("genesetX", 10), rep("genesetY", 25)), "entrez_g…
Comment: FeatureCounts >edgeR > GO by Pegasus ▴ 80
Thank you Basti. I annotated my genome using NCBI annotation tool, so I believe I should use the NCBI database. However, the gene_IDS l…
Comment: Suggestion for approaching multiple conditions scRNA-seq by Eisuan ▴ 20
Hi, I analyzed the datasets separately as follows: - control+condition 1 - control + condition 1+2 (not all the three merged!) I applied…
Comment: Update MitoZ 3.4 to 3.5 by Ram 38k
Right, that is one interpretation. Another is that they wish to replace the existing version and not add a new version, as most users new t…
Comment: Quality control of Chip-seq data (NRF and PCB) by Darked89 4.2k
If you remove the duplicates then the non-redundant/non-duplicated fraction will be 1.0. But if you save the log file during the de-duplic…
Comment: Update MitoZ 3.4 to 3.5 by Darked89 4.2k
Well, the author asked for "update without uninstall", so I assumed he/she wants to keep the 3.4 version for the time being.
Comment: Suggestion for approaching multiple conditions scRNA-seq by ATpoint 70k
"performed on Seurat" is like saying that the repair was done with a hammer and skrewdriver. Seurat has plenty of functions, you need to be…
Comment: Update MitoZ 3.4 to 3.5 by Ram 38k
While this installs a conda environment with mitoz 3.5, it does not technically update the existing installation. Please note that this (i.…
Answer: Update MitoZ 3.4 to 3.5 by Darked89 4.2k
conda create -n mitoz_35 conda activate mitoz_35 conda install -c bioconda mitoz **EDIT** you can also use Singularity conta…
Comment: What is the NCBI's definition of an "atypical genome"? by GenoMax 127k
You probably need to ask NCBI Help desk for an authoritative answer. Post their response when you get one here.
Comment: How to limit the use of RAM for clustalo? by animeshizik • 0
Hello, thank you for responding to the problem! My work computer has 32GB of RAM. I was running an alignment for a 5000 genome monkey pox…
Comment: Suggestion for approaching multiple conditions scRNA-seq by Eisuan ▴ 20
Hi! Two biological replicates. The previous analysis has been performed on Seurat.
Comment: How to demultiplex single end - dual index run - NextSeq 500 by Apex92 ▴ 260
Thank you.
Comment: genome annotation [sstart] [send] - how to get protein sequence from gene by danfarkas • 0
Hi shenwei356, Thanks for the clarification. That makes sense. I also realised that the reason I was confused, is because I need to also …
Comment: Suggestion for approaching multiple conditions scRNA-seq by rpolicastro 11k
Do you have 2 biological or technical replicates for each condition? Also, you mentioned you didn't find dramatic changes with your analysi…
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