updated 26 minutes ago by
Bastien Hervé
6.4k
•
written 1 hour ago by
npont
▴
10
0
votes
1
reply
28
views
0
votes
0
replies
21
views
0
votes
1
reply
409
views
0
votes
0
replies
17
views
0
votes
1
reply
61
views
updated 3 hours ago by
antonioggsousa
3.3k
•
written 7 hours ago by
Jamie
•
0
840
votes
170
replies
180k
views
112 follow
updated 7 weeks ago by
Biostar
3.6k
•
written 8.5 years ago by
Istvan Albert
102k
1
vote
2
replies
107
views
1 hour ago by
lessismore
★
1.4k
1
vote
0
replies
128
views
0
votes
0
replies
56
views
0
votes
1
reply
81
views
updated 3 hours ago by
antonioggsousa
3.3k
•
written 16 hours ago by
t.foskolos
•
0
0
votes
0
replies
66
views
18 hours ago by
Jonathan
•
0
0
votes
1
reply
103
views
5
votes
2
replies
381
views
updated 1 day ago by
antonioggsousa
3.3k
•
written 5 days ago by
han
▴
20
2
votes
1
reply
121
views
2
votes
5
replies
337
views
7 follow
updated 1 day ago by
Charles Plessy
★
2.9k
•
written 2 days ago by
ChumBucket2024
▴
10
0
votes
2
replies
145
views
0
votes
2
replies
163
views
0
votes
2
replies
164
views
0
votes
0
replies
93
views
1 day ago by
ieie
▴
20
0
votes
2
replies
161
views
2
votes
3
replies
242
views
updated 1 day ago by
dthorbur
★
3.0k
•
written 1 day ago by
pinheirofabiano
▴
130
1
vote
7
replies
268
views
updated 1 day ago by
GenoMax
152k
•
written 1 day ago by
ramiro.barrantes
▴
60
0
votes
0
replies
99
views
0
votes
5
replies
265
views
0
votes
0
replies
103
views
2 days ago by
Physalia-courses
★
2.6k
0
votes
3
replies
235
views
1
vote
3
replies
236
views
0
votes
2
replies
244
views
1
vote
1
reply
179
views
updated 2 days ago by
GenoMax
152k
•
written 2 days ago by
LayneSadler
▴
90
0
votes
4
replies
1.1k
views
updated 2 days ago by
schowdhury8950
•
0
•
written 12 months ago by
g.anande
•
0
0
votes
1
reply
166
views
17
votes
12
replies
605
views
7 follow
2 days ago by
AIMAR
▴
20
3
votes
1
reply
260
views
0
votes
1
reply
238
views
updated 2 days ago by
Pierre Lindenbaum
166k
•
written 4 days ago by
qian
•
0
2
votes
6
replies
2.0k
views
8
votes
4
replies
1.5k
views
updated 4 days ago by
fileyfood
▴
20
•
written 4.1 years ago by
jamie.pike
▴
90
8
votes
12
replies
2.8k
views
3
votes
3
replies
1.4k
views
updated 4 days ago by
fileyfood
▴
20
•
written 2.6 years ago by
andre.arrudalima
▴
80
2
votes
7
replies
1.4k
views
6 follow
updated 7 hours ago by
Krish
•
0
•
written 19 months ago by
andre.arrudalima
▴
80
5
votes
3
replies
1.3k
views
updated 4 days ago by
fileyfood
▴
20
•
written 4.2 years ago by
shwetamgr1
▴
20
40
votes
13
replies
12k
views
14 follow
updated 7 hours ago by
Krish
•
0
•
written 15.4 years ago by
Giovanni M Dall'Olio
28k
5
votes
2
replies
2.2k
views
2
votes
3
replies
1.8k
views
14
votes
7
replies
11k
views
1
vote
2
replies
1.1k
views
3
votes
3
replies
4.1k
views
updated 4 days ago by
fileyfood
▴
20
•
written 9.3 years ago by
sviatoslav.kendall
▴
980
2
votes
12
replies
710
views
0
votes
1
reply
288
views
updated 5 days ago by
Mensur Dlakic
★
29k
•
written 5 days ago by
benjamin.kellman
•
0
0
votes
5
replies
444
views
0
votes
0
replies
251
views
5 days ago by
Physalia-courses
★
2.6k
Recent Votes
Recent Locations •
All
France, 1 minute ago
Italy, 5 minutes ago
United Kingdom, 7 minutes ago
United Kingdom, 8 minutes ago
India/Ahmedabad, 11 minutes ago
United Kingdom, 17 minutes ago
Karolinska Institutet, Sweden, 19 minutes ago
Recent Awards •
All
Popular Question to
Aspire
▴
380
Popular Question to
Juke34
9.2k
Popular Question to
graeme.thorn
▴
110
Teacher to
antonioggsousa
3.3k
Popular Question to
Jamie
•
0
Recent Replies
Comment: Trajectory Analysis scRNA-seq with one cell type and two developmental stages
by
Bastien Hervé
6.4k
I am not sure if there is a "best" approach to do what you want.
Some comments :
> let's consider them as scRNA-seq data
The visium HD g…
Comment: Is this the correct DESeq2 design for model with interaction terms and batch eff
by
marieke
•
0
Sorry for my late answer!
This was more of a theoretical question. I'm analyzing multiple projects, and some of them need a batch effect co…
Comment: DESeq2 LRT test with multifactorial design
by
lessismore
★
1.4k
Dear, thanks for your answer. There's indeed a double interest, one is purely exploratory and and one more specific and that's why I'd like…
Answer: How to run trajectory analysis with only one cell type using palantir?
by
npont
▴
10
Hello,
I was interested by the same topic. Did you follow this procedure at the end?
I wonder if you should have filter for neutrophil…
Comment: Distribution of assayed SNPs per sample
by
mbyvcm
▴
460
I don't think it will be possible for you discern "not on chip" from "on chip but failed" without more information about the chip design, o…
Comment: Scvi - Integration
by
antonioggsousa
3.3k
Your suggestion sounds good to me. There's no need to integrate all the cells if you're only interested in TNK cells - provided you can ide…
Answer: Trouble Using GEO Files with Seurat
by
antonioggsousa
3.3k
Hi,
Yes, if you have three patient samples that you aim to integrate, you need to merge them first. If the three patient samples are `S…
Answer: DESeq2 LRT test with multifactorial design
by
LChart
5.0k
A **test** requires a **hypothesis**; but you appear to want to do an exploratory analysis that will give rise to a hypothesis ("examine al…
Comment: Where Can I Get The Secondary Structure Of A Protein?
by
Krish
•
0
You can use Gene Explorer!
https://genesearchtool.com/
It's a completely free tool that lets you upload a PDB file then get a secondary t…
Comment: Simple tools for creation of figures of gene and protein structure
by
Krish
•
0
Gene Explorer!
Recently developed. Lets you see any information on any gene, lets you see pathway visualizations, export gene/protien data…
Comment: Simple tools for creation of figures of gene and protein structure
by
Krish
•
0
Yes there is:
https://genesearchtool.com/
Gene explorer lets you see pathway visualizations, generate topology diagrams, all for FREE. I…
Comment: Parameters for annotation with maker
by
san96
▴
180
Hi, I ultimately decided not to use Maker, but I think it works as you described. Perhaps this protocol might help: https://gist.github.com…
Comment: how to use filter_vep to filter vcf file
by
Jeremy Leipzig
23k
are these VCFs derived from transcripts? why would an intron be missing from a genomic VCF?
Comment: Single-cell RNA Sequencing - transcript abundance estimation using Alevin-Fry
by
Rob
7.1k
The main issue is that there will be an inherent lack of information (due to the aforementioned 3' bias) in tagged-end data. Nonetheless, …
Traffic: 3884 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6