Limit : all time
all time today this week this month this year
1,000 results • Page 5 of 20
Sort: replies
Rank Views Votes Replies
7
votes
14
replies
2.5k
views
7 follow
Forum: Why isn't GWAS used in oncology?
gwas association oncology studies somatic cancer
updated 21 months ago by 3.9k • written 21 months ago by ▴ 90
14
votes
14
replies
2.7k
views
7 follow
Forum: Bioinformatics startup market analysis
startup
written 3.1 years ago by ▴ 30
4
votes
14
replies
2.0k
views
Forum: Schema recommendation for a gene sequencing database
clinical-genetics database
13 months ago by Ram 44k
19
votes
14
replies
2.1k
views
7 follow
Forum: What's the general view on point & click bioinformatics for routine analyses?
ngs RNA-Seq next-gen-sequencing
13 months ago by Simon ▴ 40
13
votes
14
replies
2.4k
views
Forum: NGS data analysis
NGS biostatistics
updated 13 months ago by 44k • written 8.2 years ago by ▴ 760
14
votes
14
replies
2.0k
views
6 follow
Forum: How do you process your reference data? (in genomic, metabolomic, transcriptomic, proteomic?)
OMICS Databanks
updated 13 months ago by 44k • written 7.5 years ago by ▴ 40
28
votes
14
replies
8.4k
views
8 follow
Forum: Should I work first in a Bioinformatics company or get a Ph. D.?
Biochemistry PhD career
updated 13 months ago by 44k • written 8.1 years ago by ▴ 20
28
votes
14
replies
6.9k
views
9 follow
Forum: How Do You Use Cloud Computing For Bioinformatics In 2013?
cloud
updated 15 months ago by 44k • written 10.9 years ago by 11k
3
votes
14
replies
2.2k
views
6 follow
Forum: Search for gene variants
next-gen
updated 12 months ago by 44k • written 5.8 years ago by 8.3k
9
votes
14
replies
2.5k
views
6 follow
Forum: What are the pain points in genomic variant interpretation/annotation processes?
analysis variant
updated 2.8 years ago by ★ 1.2k • written 3.0 years ago by ▴ 90
5
votes
14
replies
2.1k
views
Forum: immediate help needed for genome sequence analysis of bacteria
genome miseq webinar paired-end
updated 12 months ago by 44k • written 7.1 years ago by • 0
12
votes
14
replies
2.5k
views
8 follow
Forum: Recovering bam files after unknown deletion in the storage
photorec bam sequencing
written 5.0 years ago by ▴ 70
8
votes
14
replies
2.8k
views
Forum: Portal of choice for literature commenting
literature
updated 2.4 years ago by 44k • written 9.7 years ago by ★ 1.9k
15
votes
14
replies
11k
views
6 follow
Forum: How Should I Go About Preparing For My Bioinformatics Phd Admissions Interview?
phd
updated 14 months ago by 44k • written 10.2 years ago by ▴ 150
9
votes
14
replies
2.4k
views
Forum: MS Bioinformatics Project
assembly sequencing alignment R SNP
updated 12 months ago by 44k • written 6.1 years ago by ▴ 10
9
votes
14
replies
2.9k
views
Forum: Bookmark Questions Feature For Biostar
meta
updated 15 months ago by 44k • written 11.1 years ago by ★ 1.4k
20
votes
14
replies
2.2k
views
6 follow
Forum: Reuse of publicly available datasets
publication RNA-Seq sequencing
updated 13 months ago by 44k • written 7.3 years ago by ▴ 10
60
votes
14
replies
12k
views
16 follow
Forum: Interesting bioinformatics blogs (2017 edition)
blogs
updated 15 months ago by 44k • written 7.2 years ago by 47k
32
votes
14
replies
6.8k
views
9 follow
Forum: Pat Schloss of Mothur uses this
uses-this
updated 14 months ago by 44k • written 9.6 years ago by 100k
47
votes
14
replies
5.2k
views
Forum: Was FASTA ever popular?
FASTA alignment
updated 13 months ago by 44k • written 7.6 years ago by 13k
73
votes
14
replies
4.3k
views
12 follow
Forum: Things you wish you knew when entering the bioinformatics field
pitfalls advice
updated 11 months ago by 44k • written 3.7 years ago by ★ 17k
17
votes
14
replies
3.4k
views
Forum: Asking for feedback on a Python library for computing alignments
alignment Python
updated 11 months ago by ▴ 220 • written 2.4 years ago by ▴ 60
22
votes
14
replies
9.2k
views
6 follow
Forum: Too late to switch to Bioinformatics?
education career
updated 14 months ago by 44k • written 10.0 years ago by ▴ 30
17
votes
14
replies
3.6k
views
Forum: Biostar Release 1.2.17 (Updated Feb 18, 2013): Speed Optimizations
biostars
updated 15 months ago by 44k • written 11.3 years ago by 100k
74
votes
14
replies
30k
views
12 follow
Forum: Bioinformatics Consulting Thoughts
consulting
updated 23 months ago by 44k • written 14.0 years ago by 4.5k
17
votes
14
replies
2.0k
views
10 follow
Forum: What would be the trend in next few years in NGS era?
NGS sequencing
updated 12 months ago by 44k • written 5.5 years ago by ▴ 800
9
votes
14
replies
2.5k
views
Forum: [survey] Have your say on Bioinformatics and NGS training
next-gen training
updated 13 months ago by 44k • written 7.5 years ago by ▴ 60
7
votes
13
replies
697
views
7 follow
Forum: Ideal PC configurations and operating system for bioinformatics laboratory
PC
updated 12 minutes ago by 19k • written 29 days ago by ▴ 10
28
votes
13
replies
2.7k
views
Forum: Are there any workshops which are tailored to non-beginners/intermediate bioinformatics?
workshop
updated 19 months ago by 44k • written 8.8 years ago by ★ 4.0k
34
votes
13
replies
6.2k
views
11 follow
Forum: Best Way To Learn Bioinformatics For System Level Programmers.
NGS HPC
updated 14 months ago by 44k • written 10.3 years ago by ▴ 90
23
votes
13
replies
2.9k
views
8 follow
Forum: Planning A Change To The Way User Reputation/Rankings Are Computed. Comments/Feedback Sought.
biostars
updated 15 months ago by 44k • written 10.8 years ago by 100k
18
votes
13
replies
7.1k
views
7 follow
Forum: Being co-first author for two nature series journals, what kinds of job can I find ?
phd
updated 19 months ago by 44k • written 7.5 years ago by ▴ 90
28
votes
13
replies
1.5k
views
6 follow
Forum: Suppose you have a sequencer that can read the genome end-to-end. What aspects of bioinformatics will become irrelevant?
future
updated 17 months ago by 44k • written 7.6 years ago by ▴ 40
30
votes
13
replies
3.8k
views
11 follow
Forum: what is your daily must see bioinformatics web site?
learn technology
updated 11 months ago by 44k • written 9.7 years ago by 9.7k
15
votes
13
replies
2.2k
views
8 follow
Forum: Can we consider Bioinformatics as a engineering discipline?
engineering biology
updated 17 months ago by 44k • written 5.2 years ago by ▴ 120
15
votes
13
replies
4.3k
views
8 follow
Forum: Does a PhD or work experience set you up better to do bioinformatics work in industry?
advice industry phd
updated 4 months ago by 3.9k • written 18 months ago by ▴ 30
8
votes
13
replies
2.9k
views
8 follow
Forum: Commercial software for genomics / NGS / bioinformatics
NGS software genomics
updated 20 months ago by • 0 • written 20 months ago by ★ 1.4k
7
votes
13
replies
1.4k
views
Forum: How do you validate and verify your pipeline's software updates?
Validation Verification Quality-Assurance
updated 7 months ago by 44k • written 7 months ago by ▴ 10
11
votes
13
replies
2.9k
views
Forum: what is the difference between bioinformatician and Postdoc in Bioinformatics
career
updated 13 months ago by 44k • written 7.3 years ago by 9.7k
19
votes
13
replies
3.9k
views
7 follow
Forum: Are Business Cards Redundant In The Science Industry
industry networking
updated 14 months ago by 44k • written 10.3 years ago by ▴ 30
29
votes
13
replies
3.7k
views
6 follow
Forum: Map of bioinformatics or who is bioinformatician.
self-study
updated 13 months ago by 44k • written 7.5 years ago by ▴ 260
4
votes
13
replies
1.7k
views
Forum: Looking for Participants: Meenta NovaSeq RunShare Beta
RunShare next-gen NovaSeq
updated 11 months ago by 44k • written 4.8 years ago by ▴ 10
24
votes
13
replies
5.7k
views
6 follow
Forum: The ethics of sci-hub
paywall open-science journals publications
updated 13 months ago by 44k • written 7.9 years ago by 47k
37
votes
13
replies
3.6k
views
6 follow
Forum: Bringing Back Downvote
meta
updated 15 months ago by 44k • written 10.9 years ago by 33k
21
votes
13
replies
5.3k
views
12 follow
Forum: User Friendly VCF Filtering Tools
vcf variant-calling
updated 13 months ago by 44k • written 8.0 years ago by 6.6k
13
votes
13
replies
5.2k
views
6 follow
Forum: What Next After Snp Identification
disease genomics ngs
updated 14 months ago by 44k • written 10.4 years ago by ▴ 80
1
vote
13
replies
2.8k
views
Forum: Bioinformatics computer upgrade help
computer
updated 11 months ago by 44k • written 3.9 years ago by ▴ 50
2
votes
13
replies
2.7k
views
8 follow
Forum: Recommendation required for solution of computation requirements in Genomics field
DataAnalysis NGS Genomics
updated 3.1 years ago by 44k • written 3.1 years ago by ▴ 350
32
votes
13
replies
11k
views
10 follow
Forum: What Skills Do You Have To Have As A Phd Graduate In Bioinformatics?
genomics phd
updated 15 months ago by 44k • written 11.8 years ago by ▴ 650
31
votes
13
replies
16k
views
8 follow
Forum: Should I Pursue A Bioinformatics Msc?
career
updated 15 months ago by 44k • written 11.3 years ago by ▴ 70
1,000 results • Page 5 of 20
Recent Votes
Comment: log2 fold change in RNA-seq analysis
Comment: log2 fold change in RNA-seq analysis
Answer: Ideal PC configurations and operating system for bioinformatics laboratory
correct way of analyzing cell proportions in singlecell data
Comment: How to interpret this plotMDS of three disease clusters?
gseGO: no term enriched under specific pvalueCutoff
Answer: Error with BiocParallel. No barcodes files found
Recent Locations • All
Malaysia, 1 minute ago
United States, 1 minute ago
United States, 2 minutes ago
Colombia/Bogotá, 2 minutes ago
United States, 3 minutes ago
Germany, 3 minutes ago
Stockholm, Sweden, 3 minutes ago
Recent Awards • All
Teacher to dsull ★ 6.1k
Popular Question to adarsh_pp ▴ 40
Scholar to LChart 3.9k
Scholar to ATpoint 82k
Popular Question to liyong ▴ 80
Popular Question to Shicheng Guo ★ 9.4k
Popular Question to reza ▴ 300
Recent Replies
Answer: Z score by Akash D ▴ 50
I made this. Z scored on log2FC? will anyone support me on this? 3 groups A,B,C
Comment: log2 fold change in RNA-seq analysis by i.sudbery 19k
There is no such thing as a fold change of -2. Fold change is expression_in_condition_A/expresssion_in_condition_B as expression is a…
Comment: Ideal PC configurations and operating system for bioinformatics laboratory by i.sudbery 19k
DE with 100s of samples (particulalry if your experiemental design is more complex than 2 condition DE) can stretch consumer grade hardware…
Comment: Error with BiocParallel. No barcodes files found by NTerway • 0
Thank you for your help! I will try this out. I am trying to implement a collaborator's pipeline on my data and they only use SCE, scran an…
Comment: Ideal PC configurations and operating system for bioinformatics laboratory by ATpoint 82k
Once you have the counts any n is possible on a regular analysis-grade laptop or workstation. Even hundreds of samples. It's really the pre…
Comment: Error with BiocParallel. No barcodes files found by ATpoint 82k
You just tell the function to remove the prefix for you. Not on the actual file. Then you can add this information to the SCE, like `sce$da…
Comment: log2 fold change in RNA-seq analysis by May Ling • 0
Thank you for your response. I apologize if my understanding is incomplete. I would like to ask: if I have a fold change of -2, how can I c…
Comment: Ideal PC configurations and operating system for bioinformatics laboratory by i.sudbery 19k
Yeah, a standard 3x3 bulk experiement is very analysable on pretty much most good consumer laptops these days.
Comment: Error with BiocParallel. No barcodes files found by NTerway • 0
Thanks for the explanation! If I remove the prefix (GSM3972009_69_) then I will lose the sample annotation and cannot track them. I am more…
Comment: Unexpected read length from NGS by ATpoint 82k
Seconding this. Just ask them.
Answer: Error with BiocParallel. No barcodes files found by ATpoint 82k
The function assumes simply barcodes.tsv(.gz), genes.tsv(.gz) and matrix.mtx(.gz), without additional pre- or suffixes by default. You can …
Comment: Free AI for R programming by GenoMax 142k
Try: https://ai.tinybio.cloud/
Comment: How to interpret this plotMDS of three disease clusters? by ATpoint 82k
arrayWeights is imo always a good idea with human (or generally large) cohorts. What you can also do is to use something like sva to estima…
Comment: Cellranger-multi : Demultiplexing and Analyzing 5’ Immune Profiling Libraries Po by GenoMax 142k
Not what you want to hear but it is possible that the Ab data is not good quality as the cellranger message says (assuming everything ran p…
Comment: Ideal PC configurations and operating system for bioinformatics laboratory by ATpoint 82k
Bulk RNA-seq is way less intensive in every regard than single-cell. Whatever you buy, be sure it's upgradable, meaning, no Mac :)
Traffic: 2586 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6