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1,000 results • Page
2 of 20
Sort: replies
Rank
Views
Votes
Replies
2
votes
12
replies
1.9k
views
The best way to get gene lengths for 15K+ genes?
r
EDAseq
RNA-seq
12 months ago by
JACKY
▴ 100
1
vote
12
replies
1.4k
views
Volcano plot interpretation
EnhancedVolcano
volcano-plot
updated 7 months ago by
Ram
40k • written 2.2 years ago by
fahim
▴ 20
0
votes
12
replies
1.8k
views
bedtools intersect issue
bed
bedtools
updated 6 months ago by
Ram
40k • written 5.1 years ago by
elisheva
▴ 120
0
votes
12
replies
1.3k
views
Splitting CRAM files
CRAM-files
sequence-alignment
9 months ago by
langziv
▴ 50
2
votes
12
replies
4.3k
views
Adding barcodes to forward and reverse reads after sequencing
obitools
barcoding
next-gen-sequencing
updated 7 months ago by
Ram
40k • written 8.4 years ago by
cmogren
▴ 20
1
vote
12
replies
3.5k
views
why different outputs with applying various extracting fasta sequences tool, which one correct!?
alignment
sequencing
RNA-Seq
updated 11 months ago by
Ram
40k • written 8.1 years ago by
seta
★ 1.8k
1
vote
12
replies
3.9k
views
Can anyone explain the weird Insert Size HIstogram
RNA-Seq
alignment
sequencing
updated 8 months ago by
ATpoint
76k • written 6.0 years ago by
SMILE
▴ 170
1
vote
12
replies
3.5k
views
dN/dS analysis of genomes
genome
sequence
alignment
11 months ago by
Mehmet
▴ 820
7
votes
12
replies
1.1k
views
Integrated genes from bulk RNA seq and ATAC seq
bulk-RNA
integrated
ATAC-seq
updated 4 months ago by
Sasha
▴ 720 • written 4 months ago by
Chris
▴ 180
8
votes
12
replies
3.1k
views
Use BLAST Command Line Applications to run a folder of many sequences against a database
BLAST
updated 6 months ago by
Ram
40k • written 2.1 years ago by
daver.v
▴ 30
4
votes
12
replies
1.3k
views
Bulk RNA seq: all p adjusted are the same
p-adj
RNA-seq
differential-gene-expression
updated 9 months ago by
Ram
40k • written 16 months ago by
nils.simon.biology
▴ 10
0
votes
12
replies
2.8k
views
Allpaths- Keep getting ConvertToFastbQualb.pl failed for group 'paired_ends' when I run PrepareAllPaths
next-gen
Assembly
updated 9 months ago by
Ram
40k • written 8.2 years ago by
mafireyi
▴ 80
6
votes
12
replies
1.4k
views
VCF files 101 - for people from non Bioinformatics Background
vcf
sequencing
genome
variant-calling
updated 6 months ago by
Ram
40k • written 3.1 years ago by
akshaykum684
▴ 20
5
votes
12
replies
879
views
Data from an experiment
single-cell
updated 7 months ago by
GenoMax
134k • written 7 months ago by
Chris
▴ 180
0
votes
12
replies
702
views
scrna seq analysis - doublets
scrna
seq
code
r
updated 12 weeks ago by
Nitin Narwade
★ 1.4k • written 12 weeks ago by
bioinformatics
▴ 20
0
votes
12
replies
3.0k
views
comparative analysis of two strains of bacteria's genomes
genome
gene
updated 4 months ago by
Ram
40k • written 5.9 years ago by
fonteneaudam
▴ 20
1
vote
12
replies
1.1k
views
gatk Funcotator
vcf
Funcotator
gatk
12 weeks ago by
Saurabh
• 0
6
votes
12
replies
1.3k
views
Good tutorials/textbooks/articles to introduce biomarker discovery to a biologist?
r
biomarker
updated 6 months ago by
Ram
40k • written 4.7 years ago by
english.server
▴ 290
2
votes
12
replies
2.1k
views
how to get to a VCF from bam files
Mpileup
Samtools
BAM
bcftools
VCF
updated 6 months ago by
Ram
40k • written 6 months ago by
Human
• 0
6
votes
12
replies
966
views
Help with error in cellranger
Cellranger
updated 4 months ago by
GenoMax
134k • written 4 months ago by
Chris
▴ 180
1
vote
11
replies
3.4k
views
merge samples in phyloseq returns NAs
R
phyloseq
biom
updated 10 months ago by
joe.e.weaver
• 0 • written 3.2 years ago by
annaA
▴ 10
5
votes
11
replies
727
views
Interpret IGV output inversion
variant-calling
IGV
alignment
updated 6 weeks ago by
cmdcolin
★ 3.2k • written 7 weeks ago by
pablo
▴ 280
0
votes
11
replies
1.1k
views
Problem with Trimmomatic Multiple Paired-End sequencing.
Trimmomatic
updated 8 months ago by
GenoMax
134k • written 8 months ago by
john
• 0
0
votes
11
replies
730
views
Normalization for microarrays >1000+ samples?
microarray
normalization
oligo
6 days ago by
evmae
• 0
4
votes
11
replies
931
views
PCA WITH PLINK
PLINK
updated 5 weeks ago by
Kevin Blighe
86k • written 6 weeks ago by
adriana michelle
• 0
1
vote
11
replies
3.3k
views
bedtools fisher interpretation of "in -a" "not in -b"
fisher
bedtools
intersection
updated 7 months ago by
Ram
40k • written 5.6 years ago by
jomo018
▴ 720
1
vote
11
replies
755
views
Quantification after transcriptome assembly with Trinity
De-novo-transcriptome-assembly
Trinity
RNA-seq-analysis
updated 2 days ago by
GenoMax
134k • written 29 days ago by
langziv
▴ 50
5
votes
11
replies
558
views
Make heatmap for RNA-seq with non replicate
RNA-seq
updated 7 weeks ago by
Ram
40k • written 7 weeks ago by
Chris
▴ 180
5
votes
11
replies
3.3k
views
Convert Plink to Arlequin
software-error
plink
Arlequin
PGDSpider
updated 6 months ago by
Ram
40k • written 5.4 years ago by
HG
▴ 30
4
votes
11
replies
2.9k
views
Please add an explicit type tag :NAME
software-error
next-gen
genome
updated 7 months ago by
Ram
40k • written 5.4 years ago by
mahdikhadem95
▴ 30
6
votes
11
replies
1.2k
views
Calculate RPKM
RPKM
6 months ago by
Chris
▴ 180
0
votes
11
replies
1.4k
views
count file having zero
RNA-Seq
next-gen
alignment
updated 3 months ago by
Ram
40k • written 4.7 years ago by
BioBaby
▴ 20
0
votes
11
replies
1.9k
views
i want to convert .ht2 files into FASTA file
GATK
HISAT2
FASTA
updated 3 months ago by
Ram
40k • written 4.4 years ago by
saumya.sharma1509
• 0
7
votes
10
replies
1.4k
views
col as names [solved]
R
updated 6 months ago by
Ram
40k • written 4.5 years ago by
demoraesdiogo2017
▴ 90
1
vote
10
replies
2.8k
views
How to specify/calculate subject coverage of the alignment (alignment of query[protein sequence] and subject[Nucleotide sequence]) in tBLASTn?
alignment
BLAST
tBLASTn
updated 4 months ago by
Ram
40k • written 4.5 years ago by
Kumar
▴ 120
2
votes
10
replies
1.4k
views
multiple FASTA sequnces in to one full sequnce according to their chromosome number
NGS
FASTA
bam
updated 6 months ago by
Ram
40k • written 4.6 years ago by
Anu
• 0
4
votes
10
replies
615
views
Extract unmapped reads OR reads covering chromosome 6 from a bam file?
fastq
bam
samtools
picard
7 months ago by
dps2501
▴ 20
0
votes
10
replies
2.3k
views
WGCNA, module trait relationship
R
updated 11 months ago by
priya.bmg
▴ 60 • written 3.1 years ago by
sadeghi.reyhane
• 0
5
votes
10
replies
602
views
Error when viewing a bam file
samtools
updated 3 months ago by
Ram
40k • written 4 months ago by
Chris
▴ 180
1
vote
10
replies
898
views
Deepvariant variant calling by singularity
deepvariant
singularity
conda
docker
updated 4 days ago by
jeffhsu3
• 0 • written 12 weeks ago by
fra.silvestro99
▴ 10
2
votes
10
replies
1.4k
views
R-studio freezes error
RStudio
offtopic
updated 11 months ago by
Ram
40k • written 11 months ago by
Amr
▴ 140
8
votes
10
replies
1.5k
views
PyWGCNA
WGCNA
3 months ago by
yoshifumimiya
▴ 40
1
vote
10
replies
5.5k
views
which field has more scope Bioinformatics or Biomedical engineering at MS level???
biomedical
updated 5 months ago by
Ram
40k • written 7.1 years ago by
purpledora100
• 0
0
votes
10
replies
1.7k
views
DeSeq2 "some values in assay are negative"
RNAseq
10 months ago by
Morris_Chair
▴ 340
1
vote
10
replies
777
views
Do monoclonal antibodies have a blocking effect?
block
antibody
offtopic
updated 5 weeks ago by
Jeremy
▴ 840 • written 5 weeks ago by
jinyu
▴ 10
4
votes
10
replies
746
views
Check Strandedness
Check_Strandedness
how_are_we_stranded_here
leafcutter
bash
4 weeks ago by
Y
• 0
7
votes
10
replies
1.5k
views
Ubuntu 20.04 Crash
Ubuntu
updated 7 months ago by
Ram
40k • written 20 months ago by
bala
• 0
5
votes
10
replies
781
views
the distribution of log2Fc and t value are not similar for bulk RNA-seq
decoupleR
RNA-seq
4 weeks ago by
alwayshope
▴ 30
2
votes
10
replies
4.0k
views
Error encountered while running stattest from ballgown package
bioconductor
RNA-Seq
ballgown
stattest
updated 5 months ago by
Ram
40k • written 6.4 years ago by
lakhujanivijay
5.8k
2
votes
10
replies
6.7k
views
fq.gz file use
BioEdit
R
updated 6 months ago by
Ram
40k • written 4.6 years ago by
choi.yisoo.hi
• 0
1,000 results • Page
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