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1,000 results • Page
3 of 20
Sort: replies
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Views
Votes
Replies
7
votes
10
replies
1.5k
views
Ubuntu 20.04 Crash
Ubuntu
updated 7 months ago by
Ram
40k • written 20 months ago by
bala
• 0
1
vote
10
replies
1.9k
views
Weird results for scRNA-seq
scRNA-seq
GEO
updated 8 months ago by
Giuseppe
▴ 70 • written 9 months ago by
tujuchuanli
▴ 100
5
votes
10
replies
747
views
the distribution of log2Fc and t value are not similar for bulk RNA-seq
decoupleR
RNA-seq
27 days ago by
alwayshope
▴ 30
2
votes
10
replies
1.4k
views
R-studio freezes error
RStudio
offtopic
updated 11 months ago by
Ram
40k • written 11 months ago by
Amr
▴ 140
1
vote
9
replies
1.2k
views
Error after installation of AGAT
Perl
AGAT
8 months ago by
L_bioinfo
• 0
1
vote
9
replies
757
views
Trying to edit VCF file
VCF
R
bcftools
snpsaurus
updated 3 months ago by
Ram
40k • written 3 months ago by
peavy
• 0
1
vote
9
replies
992
views
Couldn't get a file descriptor referring to the console multiqc
multiqc
updated 4 months ago by
Ram
40k • written 14 months ago by
smithkthedale
▴ 10
3
votes
9
replies
2.0k
views
Blast+ remote database names
blast
remote
databases
Blastplus
updated 9 weeks ago by
GenoMax
134k • written 20 months ago by
Komalharini
• 0
3
votes
9
replies
483
views
Understanding this analysis pipeline
reads
updated 12 weeks ago by
Ram
40k • written 12 weeks ago by
artemchuki
• 0
3
votes
9
replies
3.3k
views
fastqc html file
fastqc
updated 7 months ago by
Ram
40k • written 21 months ago by
Cihan
• 0
0
votes
9
replies
612
views
gene id
gene-id
NCBI
updated 11 weeks ago by
GenoMax
134k • written 12 weeks ago by
safeassli
• 0
0
votes
9
replies
858
views
grep multiple lines form file
shell-script
grep
updated 3 months ago by
Ram
40k • written 3.3 years ago by
harry
▴ 30
0
votes
9
replies
4.8k
views
Calculating FPKM and TPM by hand from htseq-count output?
RNA-Seq
rna-seq
htseq
FPKM
TPM
updated 6 weeks ago by
ATpoint
76k • written 4.4 years ago by
Joel Wallenius
▴ 180
1
vote
9
replies
1.2k
views
kallisto bootstrap / condo installation problem
hfd5
kallisto
condo
updated 4 months ago by
dsull
★ 4.6k • written 4 months ago by
micecanfly
▴ 10
5
votes
9
replies
3.7k
views
Combining all biological replicates
RNA-Seq
Cuffdiff
updated 11 months ago by
Ram
40k • written 8.1 years ago by
melati
▴ 10
0
votes
9
replies
5.5k
views
PLINK does not uncompress GZ file automatically, why?
plink
gz
SNP
updated 11 months ago by
Ram
40k • written 8.1 years ago by
odeta.xjd
• 0
0
votes
9
replies
1.3k
views
Differential gene expression analysis with no replicates using edgeR
edgeR
RNA-seq
DEG
updated 8 months ago by
Ram
40k • written 9 months ago by
Apex92
▴ 270
1
vote
9
replies
2.8k
views
build databses for genome using snpEff
annotation
SNP
snpEff
updated 4 weeks ago by
nehakhilwani18
• 0 • written 5.1 years ago by
StudentBio
• 0
2
votes
9
replies
553
views
Read length for single -ended RNA seq data analysis
read-length
fastq
updated 7 weeks ago by
Ram
40k • written 7 weeks ago by
vinaya
• 0
0
votes
9
replies
576
views
User's choice for three- or single- letter amino acids in reading frames
python
updated 5 months ago by
Ram
40k • written 5 months ago by
kianamajd45
• 0
0
votes
9
replies
1.7k
views
Microarray analysis in R - target.txt,file,Sample info
R
updated 6 months ago by
Ram
40k • written 24 months ago by
bioinformatics
▴ 20
6
votes
9
replies
2.4k
views
How to analyze the scRNA seq Fastq files from NCBI
SRAtool
Cellranger
NCBI
updated 3 months ago by
Ram
40k • written 20 months ago by
aimanbarki
▴ 20
6
votes
9
replies
1.4k
views
Error when runing Bowtie2: (ERR): bowtie2-align exited with value 1
BAM
Bowtie
updated 4 months ago by
Ram
40k • written 7 months ago by
luzglongoria
▴ 50
1
vote
9
replies
706
views
gene annotation
gtf
gene-annotation
updated 4 months ago by
Ram
40k • written 4 months ago by
ahmad
• 0
0
votes
9
replies
1.1k
views
How to resolve a ValueError: Multiple 'HD' Lines are not permitted when I run Circle-Map on a Linux system
Circle-Map
ValueError
11 months ago by
liyuguo
• 0
4
votes
9
replies
7.8k
views
bcftools consensus command
vcf
bcftools
updated 6 months ago by
Ram
40k • written 3.7 years ago by
Begonia_pavonina
▴ 100
5
votes
9
replies
2.6k
views
differential expression analysis tools for single end reads
rna-seq
next-gen
updated 11 months ago by
Ram
40k • written 8.1 years ago by
mike
▴ 90
0
votes
9
replies
821
views
Deepvariant variant calling by singularity
deepvariant
singularity
conda
docker
updated 8 weeks ago by
amy__
▴ 150 • written 11 weeks ago by
fra.silvestro99
• 0
0
votes
9
replies
3.1k
views
MATLAB Volcano Plot
Microarray
r
RNA-Seq
genome
updated 6 months ago by
Ram
40k • written 5.6 years ago by
bikash2510
▴ 30
6
votes
9
replies
5.0k
views
Best Possible set of Python interview questions for Bioinformatics, that a recruiter can ask?
python
updated 6 months ago by
Ram
40k • written 8.4 years ago by
gaurav.singh
▴ 10
2
votes
9
replies
2.2k
views
SAM file quality check without converting into BAM
Alignment
SAM
updated 6 months ago by
Ram
40k • written 4.3 years ago by
vaish01kv
• 0
0
votes
9
replies
4.1k
views
Merge BAM files for a lane with multiplexed samples.
multiplexing
samtools
baserecalibrator
gatk
updated 8 months ago by
Ram
40k • written 8.3 years ago by
Timothée Flutre
▴ 20
0
votes
9
replies
2.1k
views
star --readFilesIn error when using unmapped.out.mate1/2 files
star
RNA-Seq
updated 11 months ago by
benformatics
3.7k • written 3.1 years ago by
kokoko
• 0
0
votes
9
replies
3.0k
views
The soapfuse running problem
soapfuse
updated 8 months ago by
Ram
40k • written 8.3 years ago by
syxbestmayer
▴ 10
1
vote
9
replies
2.8k
views
bam to fasta error using samtools
fasta
bam
updated 6 months ago by
Ram
40k • written 6.5 years ago by
christacaggiano
▴ 60
7
votes
9
replies
1.0k
views
Tools to check the length of isoforms in reference transcript
transcript
histogram
isoform
11 months ago by
Jjbox
▴ 40
0
votes
9
replies
1.2k
views
WGCNA-1st step-weighted correlation network for labelfreequantified proteomics data
network
proteomics
WGCNA
correlation
updated 10 months ago by
andres.firrincieli
3.4k • written 10 months ago by
anusha
• 0
4
votes
9
replies
857
views
Aligning fastq files using STAR
RNA
loop
STAR
HG
Sequencing
9 months ago by
kcarey
• 0
0
votes
9
replies
1.1k
views
how to get fastq file from cellranger?
Cellranger
mkfastq
updated 9 months ago by
GenoMax
134k • written 9 months ago by
Info.shi
▴ 30
0
votes
9
replies
792
views
Sum the values based on the variant names and give the result in stats format
coding
updated 7 months ago by
Ram
40k • written 7 months ago by
smrutimayipanda
▴ 20
0
votes
9
replies
1.2k
views
Running ANNOVAR table_annovar.pl. Error convert2annovar.pl: not found
ANNOVAR
perl
Annotation
VCF
8 months ago by
vvs.hazia
▴ 10
3
votes
9
replies
843
views
Mutation filtering based on Lanes
ngs
calling
Variant
lanes
updated 11 months ago by
LChart
3.3k • written 11 months ago by
Gama313
▴ 120
11
votes
9
replies
2.3k
views
samtools piping with awk/ bash commands -> Wonky things happen!!!
bash
samtools
awk
updated 9 months ago by
Ram
40k • written 8.3 years ago by
QVINTVS_FABIVS_MAXIMVS
★ 2.5k
0
votes
9
replies
3.3k
views
Viral integration with RNA-seq data
ngs
RNA-seq
updated 6 months ago by
Ram
40k • written 6.0 years ago by
KVC_bioinfo
▴ 590
3
votes
9
replies
700
views
Estimate sizes of repeats in a especific Gene
CGG
Fragile-X
4 months ago by
Rafael
▴ 10
0
votes
9
replies
868
views
Error in DESeqDataSetFromHTSeqCount
DESeq2
RNA-seq
HTseq
updated 10 months ago by
swbarnes2
13k • written 10 months ago by
abhay.kanodia
▴ 10
8
votes
9
replies
2.7k
views
error in rstudio
csv
matrix
rstudio
updated 11 months ago by
Ram
40k • written 8.1 years ago by
fi1d18
★ 4.2k
0
votes
8
replies
1.3k
views
What current tools are used to phase haplotypes from a FASTQ file?
phasing
haplotypes
genomics
updated 7 months ago by
Ram
40k • written 23 months ago by
adam
• 0
0
votes
8
replies
1.6k
views
Chromosome Location of Sequence in Fasta File using Biopython
biopython
python
updated 3 months ago by
Ram
40k • written 3.8 years ago by
muhammad.khizerkiet
• 0
1
vote
8
replies
13k
views
How to update rlang in R?
rlang
R
11 months ago by
Amr
▴ 140
1,000 results • Page
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A: How to extract a sequence below a fasta header (">") from a fasta file ?
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