Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
Showing :
questions
0
votes
1
reply
234
views
Normalization strategies for comparing mapped reads across samples in RNA-seq
normalization
rnaseq
updated 6 weeks ago by
Ram
43k • written 6 weeks ago by
Picasa
▴ 640
1
vote
1
reply
216
views
Seeking for edgeR TMM Normalization calcul example
tmm
edgeR
deseq2
updated 7 weeks ago by
jared.andrews07
★ 16k • written 7 weeks ago by
Picasa
▴ 640
0
votes
3
replies
399
views
GO enrichment plot with dotplot strange axis
enrichment
go
plot
updated 3 months ago by
bk11
★ 2.4k • written 3 months ago by
Picasa
▴ 640
0
votes
1
reply
459
views
Seurat: How to get all genes name of a cell ?
seurat
updated 11 months ago by
jv
★ 1.8k • written 11 months ago by
Picasa
▴ 640
0
votes
1
reply
541
views
DESeq2 : parameter of Negative Binomial model in a context of gene expression
rnaseq
DESeq2
NB
11 months ago by
Picasa
▴ 640
2
votes
11
replies
6.3k
views
7 follow
PCA on VCF
pca
vcf
updated 21 months ago by
Jeremy Leipzig
22k • written 8.1 years ago by
Picasa
▴ 640
0
votes
6
replies
4.3k
views
Merging vcf files ?
vcf
updated 23 months ago by
fotaye7734
• 0 • written 7.9 years ago by
Picasa
▴ 640
0
votes
3
replies
855
views
Alignment of genomes and get statistics about alignment
genome
updated 2.6 years ago by
manaswwm
▴ 510 • written 2.6 years ago by
Picasa
▴ 640
2
votes
2
replies
761
views
Primers and multimapping ?
primer3
updated 2.6 years ago by
ATpoint
82k • written 2.6 years ago by
Picasa
▴ 640
2
votes
1
reply
798
views
R package for structural variation representation ?
structural
variation
mummer
updated 2.7 years ago by
benformatics
3.9k • written 2.7 years ago by
Picasa
▴ 640
2
votes
7
replies
3.2k
views
Using RNA seq for genome annotation
maker
annotation
updated 3.0 years ago by
Istvan Albert
100k • written 6.9 years ago by
Picasa
▴ 640
0
votes
0
replies
511
views
Phased SNPs with single rad seq data ?
snp
rad
single
3.0 years ago by
Picasa
▴ 640
0
votes
0
replies
656
views
Alternative free software for recombination rate estimation ?
radseq
joinmap
stacks
3.0 years ago by
Picasa
▴ 640
0
votes
0
replies
996
views
Tools for .hic file visualization
juicer
3d-dna
hic
3.2 years ago by
Picasa
▴ 640
0
votes
1
reply
818
views
Assessing collapsed assembly ?
Assembly
paralogue
collapsing
updated 3.9 years ago by
colindaven
6.4k • written 3.9 years ago by
Picasa
▴ 640
2
votes
5
replies
1.3k
views
Best way for phylogenetic tree with missing data
phylogenetic tree
updated 3.9 years ago by
Mensur Dlakic
★ 27k • written 3.9 years ago by
Picasa
▴ 640
3
votes
3
replies
1.4k
views
Transcript or cds for phylogenetic tree ?
msa
phylogenetic
updated 4.0 years ago by
lieven.sterck
15k • written 4.0 years ago by
Picasa
▴ 640
1
vote
0
replies
614
views
Subset long reads and optimal coverage
long reads
Assembly
updated 4.0 years ago by
Biostar
20 • written 4.0 years ago by
Picasa
▴ 640
3
votes
4
replies
1.0k
views
Structural variation germline vs somatic ?
structural variation
germline
somatic
updated 4.1 years ago by
metinyazar88
▴ 10 • written 4.1 years ago by
Picasa
▴ 640
2
votes
3
replies
868
views
How to get Gene ID from NCBI accession for non model species ?
gene id
ncbi
accession
updated 4.1 years ago by
GenoMax
142k • written 4.1 years ago by
Picasa
▴ 640
6
votes
6
replies
1.3k
views
Where to upload protein coding gene annotation ?
maker
protein
updated 4.1 years ago by
Juke34
8.6k • written 4.1 years ago by
Picasa
▴ 640
0
votes
3
replies
1.4k
views
RepeatMasker overlap and interpretation
repeat
overlap
updated 4.1 years ago by
lieven.sterck
15k • written 4.1 years ago by
Picasa
▴ 640
1
vote
3
replies
903
views
Contig longer than mitochondrial sequence. Explanation ?
mitochondrial
contig
updated 4.2 years ago by
vmicrobio
▴ 290 • written 4.2 years ago by
Picasa
▴ 640
0
votes
1
reply
847
views
hi-c coverage for scaffolding
hi c
scaffold
Assembly
4.3 years ago by
Picasa
▴ 640
0
votes
1
reply
849
views
SnpEff database with maker annotation format
maker
snpeff
updated 4.4 years ago by
prince26121991
▴ 70 • written 4.4 years ago by
Picasa
▴ 640
1
vote
4
replies
1.4k
views
Extract genes from GTF with variants from VCF
gtf
variants
4.5 years ago by
Picasa
▴ 640
1
vote
4
replies
1.3k
views
Get counts for allele specific expression analysis
RNA-Seq
allele expression
ase-tigar
4.6 years ago by
Picasa
▴ 640
5
votes
7
replies
2.2k
views
Scaffolding a genome with long reads.
assembly
long reads
pacbio
updated 4.6 years ago by
lieven.sterck
15k • written 4.6 years ago by
Picasa
▴ 640
2
votes
1
reply
2.4k
views
Option -categorize in SNAP gene prediction.
annotation
snap
maker
updated 4.6 years ago by
Biostar
20 • written 7.6 years ago by
Picasa
▴ 640
1
vote
10
replies
1.5k
views
Location of centromere
genome
centromere
4.8 years ago by
Picasa
▴ 640
1
vote
9
replies
7.4k
views
7 follow
Hybrid assembly PacBio Illumina in 2018 ?
pacbio
illumina
hybrid assembly
updated 4.9 years ago by
pkfsantos
• 0 • written 6.3 years ago by
Picasa
▴ 640
2
votes
2
replies
9.9k
views
Multiple whole genome alignment tools ?
multiple whole genome
alignment
4.9 years ago by
Picasa
▴ 640
4
votes
4
replies
4.4k
views
Assembly of amplicons
amplicon
assembly
pcr
updated 5.0 years ago by
Biostar
20 • written 7.6 years ago by
Picasa
▴ 640
4
votes
8
replies
1.6k
views
EBI submission and AGP ?
agp
ebi
5.2 years ago by
Picasa
▴ 640
1
vote
5
replies
2.9k
views
What coverage is recommended for amplicon sequencing?
amplicon
coverage
5.3 years ago by
Picasa
▴ 640
0
votes
1
reply
2.5k
views
blast strand plus minus
blast
strand
updated 5.4 years ago by
Biostar
20 • written 7.5 years ago by
Picasa
▴ 640
1
vote
3
replies
4.1k
views
Primer-blast impossible with multiple sequences ?
primer-blast
sequences
updated 5.5 years ago by
Biostar
20 • written 5.5 years ago by
Picasa
▴ 640
7
votes
13
replies
2.0k
views
How to extract the same mapped region by multiple samples ?
bam
samples
map
updated 5.5 years ago by
Alex Reynolds
35k • written 5.5 years ago by
Picasa
▴ 640
2
votes
10
replies
2.2k
views
Primer design from bam file ?
primer
map
updated 5.5 years ago by
WouterDeCoster
47k • written 5.5 years ago by
Picasa
▴ 640
0
votes
2
replies
1.5k
views
What is an optical map ?
assembly
optical map
scaffold
5.6 years ago by
Picasa
▴ 640
2
votes
1
reply
2.8k
views
coverage in amplicon sequecing method
coverage
updated 5.7 years ago by
Ram
43k • written 8.2 years ago by
Picasa
▴ 640
6
votes
24
replies
4.6k
views
Custom nr database with only arthropods ?
nr
blast
arthropods
updated 5.7 years ago by
shenwei356
8.5k • written 5.7 years ago by
Picasa
▴ 640
1
vote
2
replies
1.3k
views
Pacbio inversion visualization and IGV
inversion
igv
5.7 years ago by
Picasa
▴ 640
3
votes
1
reply
1.9k
views
Parameter to filter a VCF of SNPs?
vcf
SNP
parameters
updated 5.7 years ago by
Ram
43k • written 5.7 years ago by
Picasa
▴ 640
0
votes
2
replies
1.1k
views
n50 contig with pacbio nowadays ?
n50
pacbio
updated 5.8 years ago by
Biostar
20 • written 6.0 years ago by
Picasa
▴ 640
0
votes
1
reply
1.3k
views
Inversion detection between 2 genomes
inversion
genome
updated 5.9 years ago by
WouterDeCoster
47k • written 5.9 years ago by
Picasa
▴ 640
6
votes
5
replies
4.2k
views
Doubt on removing duplicates on amplicon sequencing data
duplicates
amplicon
updated 6.0 years ago by
Devon Ryan
104k • written 6.0 years ago by
Picasa
▴ 640
9
votes
5
replies
8.7k
views
BWA error [bns_restore_core] Parse error reading
bwa index
updated 6.2 years ago by
said3427
▴ 120 • written 7.4 years ago by
Picasa
▴ 640
2
votes
2
replies
7.5k
views
From a vcf SNP file to a phylogenetic tree
SNP
vcf
phylogenetic
updated 6.2 years ago by
leeandroid
▴ 130 • written 6.2 years ago by
Picasa
▴ 640
1
vote
7
replies
5.0k
views
GATK combine gvcf superslow
gatk
CombineGVCFs
GenomicsDBImport
6.2 years ago by
Picasa
▴ 640
115 results • Page
1 of 3
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6