updated 20 months ago by
Raheleh
▴
260
•
written 7.5 years ago by
Kevin Blighe
89k
152
votes
70
replies
57k
views
20 follow
151
votes
39
replies
29k
views
20 follow
Forum:
A Farewell To Bioinformatics
updated 2.2 years ago by
Ram
45k
•
written 12.3 years ago by
Martin A Hansen
3.0k
150
votes
33
replies
149k
views
27 follow
updated 7 months ago by
Ram
45k
•
written 13.2 years ago by
Anima Mundi
★
2.9k
149
votes
35
replies
65k
views
33 follow
Tutorial:
Tools For Metagenomic Data Analysis
149
votes
33
replies
78k
views
19 follow
148
votes
22
replies
83k
views
15 follow
updated 23 months ago by
Kevin Blighe
89k
•
written 7.5 years ago by
Mike
★
1.9k
148
votes
18
replies
39k
views
9 follow
147
votes
34
replies
58k
views
17 follow
145
votes
56
replies
11k
views
17 follow
updated 2.3 years ago by
Ram
45k
•
written 12.1 years ago by
Istvan Albert
102k
145
votes
33
replies
34k
views
20 follow
updated 6.1 years ago by
chernouhov sergey
▴
50
•
written 14.9 years ago by
User 59
13k
144
votes
14
replies
24k
views
15 follow
updated 4.1 years ago by
Jeremy Leipzig
23k
•
written 14.6 years ago by
Casey Bergman
18k
144
votes
62
replies
15k
views
23 follow
143
votes
14
replies
172k
views
16 follow
updated 18 months ago by
Ram
45k
•
written 15.1 years ago by
Pierre Lindenbaum
166k
142
votes
21
replies
32k
views
12 follow
Tutorial:
A few words for R beginners
139
votes
25
replies
89k
views
14 follow
138
votes
21
replies
74k
views
18 follow
138
votes
25
replies
92k
views
20 follow
updated 10 months ago by
pl.terzian
•
0
•
written 12.0 years ago by
deepthithomaskannan
▴
420
138
votes
27
replies
50k
views
14 follow
138
votes
42
replies
24k
views
22 follow
136
votes
26
replies
27k
views
14 follow
updated 2.3 years ago by
Ram
45k
•
written 13.3 years ago by
Brett Thomas
▴
300
136
votes
29
replies
9.1k
views
16 follow
updated 3.1 years ago by
Ram
45k
•
written 14.4 years ago by
Jeremy Leipzig
23k
136
votes
18
replies
179k
views
16 follow
updated 2.4 years ago by
katieostrouchov
▴
30
•
written 11.4 years ago by
timjoncooper
▴
320
135
votes
125
replies
45k
views
25 follow
Tutorial:
Survival analysis with gene expression
updated 3 months ago by
GenoMax
151k
•
written 6.6 years ago by
Kevin Blighe
89k
134
votes
65
replies
9.6k
views
11 follow
updated 23 months ago by
Ram
45k
•
written 5.5 years ago by
sviatoslav.kendall
▴
970
134
votes
19
replies
194k
views
13 follow
132
votes
44
replies
42k
views
16 follow
131
votes
48
replies
19k
views
19 follow
updated 13.8 years ago by
Guangchuang Yu
★
2.6k
•
written 13.8 years ago by
Eric Normandeau
11k
130
votes
37
replies
16k
views
27 follow
129
votes
38
replies
12k
views
21 follow
updated 23 months ago by
Ram
45k
•
written 6.1 years ago by
Istvan Albert
102k
129
votes
33
replies
136k
views
31 follow
128
votes
46
replies
56k
views
21 follow
128
votes
83
replies
18k
views
8 follow
Tool:
Lossless ALAPY Fastq Compressor (now for MacOS X with 10-20% improved speed and compression ratio)
updated 23 months ago by
Ram
45k
•
written 8.1 years ago by
Petr Ponomarenko
★
2.8k
126
votes
7
replies
133k
views
126
votes
56
replies
115k
views
24 follow
124
votes
29
replies
8.8k
views
18 follow
updated 18 months ago by
Ram
45k
•
written 15.2 years ago by
Simon Cockell
7.4k
124
votes
29
replies
46k
views
11 follow
updated 6.5 years ago by
Giovanni M Dall'Olio
28k
•
written 7.5 years ago by
Mozart
▴
330
124
votes
13
replies
185k
views
13 follow
124
votes
35
replies
48k
views
20 follow
122
votes
17
replies
83k
views
8 follow
122
votes
31
replies
217k
views
17 follow
updated 18 months ago by
Ram
45k
•
written 15.1 years ago by
Eric Normandeau
11k
122
votes
44
replies
14k
views
24 follow
updated 18 months ago by
Ram
45k
•
written 12.5 years ago by
Istvan Albert
102k
121
votes
8
replies
83k
views
121
votes
44
replies
24k
views
21 follow
updated 2.3 years ago by
Ram
45k
•
written 14.9 years ago by
Madelaine Gogol
5.3k
121
votes
33
replies
42k
views
24 follow
updated 2.0 years ago by
Physalia-courses
★
2.6k
•
written 11.7 years ago by
Eric Normandeau
11k
120
votes
23
replies
35k
views
14 follow
119
votes
25
replies
127k
views
12 follow
118
votes
15
replies
109k
views
15 follow
updated 14.3 years ago by
Mona Mohamed
•
0
•
written 14.5 years ago by
Terence
▴
210
118
votes
74
replies
51k
views
40 follow
118
votes
26
replies
39k
views
22 follow
117
votes
18
replies
42k
views
14 follow
updated 8.1 years ago by
adavut
▴
20
•
written 13.8 years ago by
Nikolay Vyahhi
★
1.3k
Recent Votes
Recent Locations •
All
UCLA, 5 minutes ago
China, 17 minutes ago
Austria, 18 minutes ago
Bologna, 19 minutes ago
Brazil, 29 minutes ago
France, 30 minutes ago
India, 57 minutes ago
Recent Awards •
All
Popular Question to
arnstrm
★
1.9k
Popular Question to
The
▴
180
Popular Question to
druggable
▴
60
Popular Question to
Dunois
★
2.9k
Popular Question to
sarahmanderni
▴
120
Recent Replies
Comment: How to visualize Combat-seq corrected counts
by
ybw8gh
•
0
Sorry, I accidentally used ComBat! ComBat-seq did not produce negative counts. Thanks for all the help!
Answer: Trimmomatic command
by
swbarnes2
14k
Keep in mind for RNASeq
1) if the library was done properly, it's very unlikely you have many fragments shorter than your read length. …
Comment: Setaria Pan-Genome Variation: Unraveling the Story of Domestication
by
cmdcolin
★
4.2k
>de novo assembled 110 reference-grade genomes for cultivated Setaria accessions
this type of routine de novo assembly of genomes is aweso…
Comment: Facing issue with output of nextflow pipeline
by
ATpoint
88k
It looks hacky. Maybe it "works" but should not be taken as inspiration I guess. Are you sure output could be redicted to other processed l…
Comment: Discrepancy Between Reported Nitrogen-Fixing Ability and Genomic Evidence in Aci
by
GenoMax
151k
Have you considered the possibility that if no strains of Acinetobacter guillouiae available in NCBI show presence of nitrogen fixing genes…
Answer: Facing issue with output of nextflow pipeline
by
neng
▴
50
This is a common issue that many learners encounter when working with Nextflow output management.
1. Use publishDir("${params.outdir}/..…
Comment: Discrepancy Between Reported Nitrogen-Fixing Ability and Genomic Evidence in Aci
by
Nafi
•
0
Yes, I have tested all of them. I guess NCBI does not have this particular strain.
Answer: Pie Charts: to use or not to use
by
Joe
22k
As with any visualisation method, there is a time and a place for them. They are often misused, or used when a different method would be be…
Answer: Pie Charts: to use or not to use
by
Bastien Hervé
6.3k
Your first paragraph is answering the latter and as said in the second paragraph, one cannot force people not to use it.
It is like RPKM/F…
Comment: Target prediction
by
dthorbur
★
3.0k
I'm unfamiliar with the representation of phytochemicals in either database, so can't answer for certain, but generally I would say both da…
Answer: Minimum Number of Cells for Downstream Analysis after subsetting a particular ce
by
ATpoint
88k
There is no answer to this. Some people will say 10, other 3, others 500. Generally, since single-cell is noisy and has dropouts, even for …
Answer: Discrepancy Between Reported Nitrogen-Fixing Ability and Genomic Evidence in Aci
by
Mensur Dlakic
★
29k
The specific strain described in that paper (*Acinetobacter guillouiae* EU-B2RT.R1) doesn't seem to be available in NCBI. It could be as si…
Comment: Heatmap of a transformed deseq object with pheatmap
by
GenoMax
151k
Please use `ADD REPLY/ADD COMMENT` when responding to existing posts. `ADD ANSWER` is only for new answers to original question.
Comment: Heatmap of a transformed deseq object with pheatmap
by
caroline.zanchi
•
0
...I decided to try 'ComplexHeatmap' :
```r
ha = HeatmapAnnotation(df = annot_col, which="column",show_annotation_name = FALSE,show_legend=…
Comment: PRS result interpretation
by
trkfs
▴
10
Much thanks for your reply.
If I could ask - what would be the best way or what kind of data is typically needed to obtain a PRS score that…
Traffic: 1721 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6