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458 results • Page
1 of 10
Sort: Rank
Rank
Views
Votes
Replies
5
votes
4
replies
388
views
Forum:
Ideal PC configurations and operating system for bioinformatics laboratory
PC
6 days ago by
Estevão
• 0
0
votes
0
replies
181
views
Forum:
Improvement on automatic annotation of single-cell RNA-seq data from the literature using LLM
annotation
scRNA
llm
15 days ago by
yxwucq
• 0
4
votes
2
replies
333
views
Forum:
Bioinformatics: Where do I start
Sequencing
updated 22 days ago by
Ram
43k • written 22 days ago by
Adi
▴ 10
7
votes
7
replies
1.7k
views
Forum:
Bioinformatician who was retaliated against after reporting discriminatory harassment - Please help me navigate getting out of the situation I'm in
Career
advice
updated 23 days ago by
Dunois
★ 2.5k • written 24 days ago by
AdviceSeeker
• 0
1
vote
2
replies
372
views
Forum:
VCF bulk handling
bcftools
SnpEff
WGS
VEP
VCF
21 days ago by
Javier
• 0
16
votes
10
replies
1.1k
views
6 follow
Forum:
F*up Night style events for Bioinformatics ? Comment if you're interested!
mistakes
updated 5 weeks ago by
Madelaine Gogol
5.3k • written 5 weeks ago by
Ann
★ 2.4k
1
vote
1
reply
237
views
Forum:
Can I use this community for software development?
software-development
updated 6 weeks ago by
Ram
43k • written 6 weeks ago by
avpuzanov
• 0
5
votes
2
replies
398
views
Forum:
Can questions and answers on biostars be asked only in English? Can't I use Russian for example?
language
updated 6 weeks ago by
Michael
54k • written 6 weeks ago by
avpuzanov
• 0
0
votes
0
replies
186
views
Forum:
Field of Study in Computational Biology
Genomics
Computational-Biology
PhD
updated 7 weeks ago by
Ram
43k • written 7 weeks ago by
Mohammed
• 0
1
vote
3
replies
493
views
Forum:
Development plan for a bioinformatics database developer/coder
developer
7 weeks ago by
pixie@bioinfo
★ 1.5k
7
votes
8
replies
735
views
Forum:
Bioinformatics career transition
career
forum
updated 7 weeks ago by
jared.andrews07
★ 16k • written 7 weeks ago by
jevill17
▴ 20
4
votes
2
replies
510
views
Forum:
Exploring Amino Acid Patterns in Proteins Through N-gram Analysis
protein
CAFA5
8 weeks ago by
Anatoly A.
▴ 10
6
votes
6
replies
797
views
Forum:
You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical
thought-experiment
9 weeks ago by
jared.andrews07
★ 16k
0
votes
0
replies
177
views
Forum:
What other data types and pipelines you would like to see from the Genomics Data Commons (GDC)
gdc
tcga
genomics-data-commons
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
Zhenyu Zhang
★ 1.2k
0
votes
2
replies
406
views
Forum:
What's the state of the art in bacterial whole genome alignment?
whole
genome
alignment
mauve
9 weeks ago by
Dave Carlson
★ 1.7k
31
votes
12
replies
1.0k
views
7 follow
Forum:
Nextflow and self-made pipelines opinion
nextflow
pipeline
data-analysis
9 weeks ago by
karlaarz
▴ 90
5
votes
4
replies
584
views
Forum:
Would reaching out to local labs and startups help with my career transition?
career
volunteering
updated 10 weeks ago by
GenoMax
142k • written 10 weeks ago by
Mango
▴ 10
1
vote
2
replies
390
views
Forum:
Exploring Career Reentry: Challenges and opportunities for Women After Maternity and Childcare Breaks
Maternity
Career-Gap
career-reentry
updated 11 weeks ago by
ATpoint
82k • written 11 weeks ago by
ashaneev07
▴ 20
8
votes
7
replies
838
views
6 follow
Forum:
Tower Server configuration for NGS data analysis
NGS
updated 11 weeks ago by
emmanouil.a
▴ 120 • written 3 months ago by
harasharan
• 0
1
vote
0
replies
295
views
Forum:
list of bioinformatics tools in cancer genomics
mutations
CNA
cancer
genomics
LOH
updated 11 weeks ago by
Pierre Lindenbaum
161k • written 11 weeks ago by
Bogdan
★ 1.4k
4
votes
2
replies
396
views
Forum:
bulk seq vs. sc-seq
scATAC-seq
ATAC-seq
scRNAseq
RNAseq
updated 3 months ago by
dsull
★ 6.0k • written 3 months ago by
SebKittelmann
▴ 10
8
votes
6
replies
2.9k
views
Forum:
Demonstrating Exponential Growth In Pre-School
education
written 10.2 years ago by
Asaf
10k
0
votes
0
replies
211
views
Forum:
tutorial for carrier screening analyses?
carrier-screening
updated 3 months ago by
Ram
43k • written 3 months ago by
Akos
▴ 20
2
votes
3
replies
449
views
Forum:
My Project
Project
CLI
MD-Simulations
Molecular-docking
3 months ago by
Ajay A Shettigar
• 0
17
votes
11
replies
1.0k
views
Forum:
How to overcome the imposter syndrome in bioinformatics?
advice
3 months ago by
sil_bioinfo
▴ 40
10
votes
7
replies
2.3k
views
Forum:
How to learn bioinformatics?
learning
updated 3 months ago by
Samuel Lampa
★ 1.3k • written 23 months ago by
sakichwan
▴ 20
26
votes
27
replies
2.1k
views
10 follow
Forum:
Determining computer time required
computer
hpc
time
updated 3 months ago by
dsull
★ 6.0k • written 3 months ago by
Rozita
▴ 40
7
votes
6
replies
756
views
Forum:
where to work as a bioinformatician (NGS/IA)
employment
omics
ia
ngs
updated 3 months ago by
Ram
43k • written 3 months ago by
Petur
▴ 20
21
votes
12
replies
3.6k
views
Forum:
How to Use Biostars Part-3: Formatting Text and Using GitHub Gists
meta
how-to
documentation
3 months ago by
Ram
43k
2
votes
1
reply
448
views
Forum:
Cataloguing available spatial transcriptomics tools, then linking them together into a workflow?
cytassist
transcriptomics
nanostring
xenium
visium
3 months ago by
LauferVA
4.2k
49
votes
20
replies
2.1k
views
10 follow
Forum:
First experiences matter
first-time
tolerance
updated 4 months ago by
Michael Love
★ 2.6k • written 4 months ago by
Mensur Dlakic
★ 27k
4
votes
3
replies
800
views
Forum:
How to get started in bioinformatics
students
updated 3 months ago by
Ram
43k • written 4 months ago by
Soidihane
▴ 10
2
votes
2
replies
594
views
Forum:
Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
combat
single-cell
omics
batch
rnaseq
updated 4 months ago by
Ram
43k • written 4 months ago by
cwwong13
▴ 40
0
votes
2
replies
3.3k
views
Forum:
I’m considering a career transition from software engineering to bioinformatics. Is it a good fit for me?
career
updated 4 months ago by
GenoMax
142k • written 4 months ago by
Mango
▴ 10
5
votes
3
replies
625
views
Forum:
Binning the rare biosphere
metagenomics
soil
assembly
techniques
binning
updated 4 months ago by
Mensur Dlakic
★ 27k • written 4 months ago by
Konstantin
▴ 20
6
votes
2
replies
679
views
Forum:
how to start Bioinformatics?
basics
updated 4 months ago by
Mensur Dlakic
★ 27k • written 4 months ago by
sajibsuvo70
• 0
19
votes
5
replies
1.2k
views
6 follow
Forum:
What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2023?
genomics
snps
survey
papers
4 months ago by
Raony Guimarães
★ 1.4k
4
votes
6
replies
949
views
6 follow
Forum:
Bioinformatics: what do you think of it in the next 20 years?
future
updated 5 months ago by
Ram
43k • written 5 months ago by
Daniel
• 0
1
vote
1
reply
499
views
Forum:
want to work in open source project/project in bioinformatics
project
updated 5 months ago by
Ram
43k • written 5 months ago by
Afeef
• 0
3
votes
5
replies
1.0k
views
Forum:
Current Trends in Bioinformatics
structural-bioinformatics
updated 5 months ago by
Ram
43k • written 6 months ago by
Paulo
• 0
21
votes
11
replies
2.5k
views
6 follow
Forum:
Rust bioinformatics projects ideas
projects
scRNA-seq
RNA-seq
Rust
updated 5 months ago by
Jeremy Leipzig
22k • written 14 months ago by
bompipi95
▴ 150
176
votes
46
replies
19k
views
26 follow
Forum:
Crac: Funny And/Or Weird Names For Bioinformatics Tools
humor
5 months ago by
Istvan Albert
100k
3
votes
2
replies
634
views
Forum:
RNA-Seq data analysis - question
Python
RNA-Seq
R
updated 6 months ago by
fturner
▴ 10 • written 6 months ago by
sil_bioinfo
▴ 40
0
votes
0
replies
383
views
Forum:
How to learn bioinformatics online?
self-education
education
learning
updated 6 months ago by
Ram
43k • written 6 months ago by
Brian Rey | BioLearn
• 0
6
votes
5
replies
2.3k
views
Forum:
Maintaning internal or private installation of Biostar or a similar Q&A site
Biostars
6 months ago by
tshtatland
▴ 190
7
votes
9
replies
1.4k
views
6 follow
Forum:
Mentor for a beginner bioinformatics student
project
mentor
6 months ago by
UT_FAN
▴ 40
0
votes
0
replies
471
views
Forum:
Steps after doublet detection in single cell data
scRNA
doublet
7 months ago by
ishwarvh
• 0
0
votes
0
replies
363
views
Forum:
Automated Checks And QA
retrospective
7 months ago by
Sasha
▴ 840
7
votes
13
replies
1.4k
views
Forum:
How do you validate and verify your pipeline's software updates?
Validation
Verification
Quality-Assurance
updated 6 months ago by
Ram
43k • written 7 months ago by
kieran
▴ 10
21
votes
7
replies
12k
views
Forum:
Bioinformatics short paper journal resource [software/webapps/database]
journal
software
webapp
updated 7 months ago by
Gennady Khvorykh
▴ 100 • written 8.1 years ago by
Sukhi Singh
11k
458 results • Page
1 of 10
Recent Votes
Answer: Where can I download some example BAM files?
Comment: Where can I download some example BAM files?
Where can I download some example BAM files?
Verify if all the components of a pathway are present in a genomes
removeBatchEffect explained using base R linear models
How to get number of characters (nucleotides) in fasta file
Answer: How can I analyze normalized expression data?
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rackbersingh
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▴ 90
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Recent Replies
Comment: Help with Biopython for Beginner
by
Pierre Lindenbaum
161k
> Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the c…
Answer: bcftools - reducing to "sites-only"?
by
Pierre Lindenbaum
161k
bcftools view -G in.vcf.gz <!-- Diabetic foot ulceration (DFU) is a devastating complication of diabetes whose pathogenesis rema…
Comment: Filtering Multi-sample VCF file for all except one Genotype
by
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I probably got some of the vocabulary wrong. I thought that "Dom HOR2932 HOR3036 HOR3726 KWSBambina Rec S42IL_124" were representing my ge…
Comment: featureCounts output assigned value higher than and HISAT2 mapping.
by
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It's featureCount**s**, not featureCount. I've edited your post and fixed all mentions of featureCounts.
Comment: kinannote software installation problems
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• 0
Hey, I know it's been 5 years but I have the same issue. When I run the test the software is unable to perform and always deliver the follo…
Comment: STAR aligner error
by
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43k
If they can't help you, we probably can't do much either. But we can optimize your STAR command. BAM SortedByCoordinate is the worst settin…
Answer: Obtaining Infinium Methylation450K manifest for hg38
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▴ 90
Hi, you can check it from github here: [https://zwdzwd.github.io/InfiniumAnnotation][1]. I don't know if this is what you are looking fo…
Comment: RNA seq analysis
by
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82k
It makes absolutely no sense to conduct such an analysis. I strongly discourage you to even start with it. Results will be utterly nonsense…
Comment: Differentail gene expression results
by
swbarnes2
14k
Cross-posted: https://support.bioconductor.org/p/9158194/
Answer: Seurat V5 integration
by
Bastien Hervé
5.3k
It will depend on your context and question. I guess you will want to compare gene expression between your conditions within cell types …
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You get this error when you try to compare two data frames that have different dimensions. Try using the traceback() command to figure out …
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Sorry, this was supposed to be a comment appended to the chain above. I didn't mean to post as an answer.
Comment: Exploring Diet Effects in Single-Cell RNA Sequencing
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> when I looked at the expression of aging marker genes, I noticed that diets sequenced in the same batch appeared more similar. How simil…
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Curious if others have also benefited from Picard's [CompareSAMs][1] tool. Seems to do exactly what Madhu has requested. If the headers …
Answer: How/where can I get fungal mitogenome data for analysis?
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alex.zaccaron
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The best repository is probably NCBI Organelle Resources. You can search by taxonomy and download their mt genomes. Check it out for fungi…
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