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1,000 results • Page
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3
votes
14
replies
2.1k
views
6 follow
Forum:
Search for gene variants
next-gen
updated 12 months ago by
Ram
43k • written 5.8 years ago by
Rm
8.3k
9
votes
14
replies
2.4k
views
Forum:
MS Bioinformatics Project
assembly
sequencing
alignment
R
SNP
updated 12 months ago by
Ram
43k • written 6.1 years ago by
Moneeb Bajwa
▴ 10
15
votes
14
replies
11k
views
6 follow
Forum:
How Should I Go About Preparing For My Bioinformatics Phd Admissions Interview?
phd
updated 14 months ago by
Ram
43k • written 10.2 years ago by
kandoigaurav
▴ 150
9
votes
14
replies
2.5k
views
Forum:
[survey] Have your say on Bioinformatics and NGS training
next-gen
training
updated 13 months ago by
Ram
43k • written 7.5 years ago by
ngstrainingleicester
▴ 60
14
votes
14
replies
2.7k
views
7 follow
Forum:
Bioinformatics startup market analysis
startup
written 3.1 years ago by
gtechbio
▴ 30
60
votes
14
replies
12k
views
16 follow
Forum:
Interesting bioinformatics blogs (2017 edition)
blogs
updated 15 months ago by
Ram
43k • written 7.2 years ago by
WouterDeCoster
47k
12
votes
14
replies
2.5k
views
8 follow
Forum:
Recovering bam files after unknown deletion in the storage
photorec
bam
sequencing
written 4.9 years ago by
Gabriel Wajnberg
▴ 70
28
votes
14
replies
8.4k
views
8 follow
Forum:
Should I work first in a Bioinformatics company or get a Ph. D.?
Biochemistry
PhD
career
updated 13 months ago by
Ram
43k • written 8.1 years ago by
mvasquez16
▴ 20
17
votes
14
replies
3.6k
views
Forum:
Biostar Release 1.2.17 (Updated Feb 18, 2013): Speed Optimizations
biostars
updated 15 months ago by
Ram
43k • written 11.3 years ago by
Istvan Albert
100k
9
votes
14
replies
2.5k
views
6 follow
Forum:
What are the pain points in genomic variant interpretation/annotation processes?
analysis
variant
updated 2.8 years ago by
Zhenyu Zhang
★ 1.2k • written 3.0 years ago by
Ryangguk Kim
▴ 90
19
votes
14
replies
2.1k
views
7 follow
Forum:
What's the general view on point & click bioinformatics for routine analyses?
ngs
RNA-Seq
next-gen-sequencing
13 months ago by
Simon
▴ 40
19
votes
14
replies
2.2k
views
Forum:
What is the amount of sequencing data produced annually?
data
research
sequencing
updated 8 months ago by
Jeremy Leipzig
22k • written 8 months ago by
vincenthus
▴ 70
22
votes
14
replies
9.2k
views
6 follow
Forum:
Too late to switch to Bioinformatics?
education
career
updated 14 months ago by
Ram
43k • written 10.0 years ago by
taneuroth
▴ 30
28
votes
14
replies
6.9k
views
9 follow
Forum:
How Do You Use Cloud Computing For Bioinformatics In 2013?
cloud
updated 14 months ago by
Ram
43k • written 10.9 years ago by
Eric Normandeau
11k
5
votes
14
replies
2.1k
views
Forum:
immediate help needed for genome sequence analysis of bacteria
genome
miseq
webinar
paired-end
updated 12 months ago by
Ram
43k • written 7.1 years ago by
mariomemory
• 0
4
votes
14
replies
1.9k
views
Forum:
Schema recommendation for a gene sequencing database
clinical-genetics
database
13 months ago by
Ram
43k
17
votes
14
replies
3.4k
views
Forum:
Asking for feedback on a Python library for computing alignments
alignment
Python
updated 11 months ago by
Alexander
▴ 220 • written 2.3 years ago by
bernhard.liebl
▴ 60
74
votes
14
replies
30k
views
12 follow
Forum:
Bioinformatics Consulting Thoughts
consulting
updated 23 months ago by
Ram
43k • written 13.9 years ago by
Will
4.5k
13
votes
14
replies
2.3k
views
Forum:
NGS data analysis
NGS
biostatistics
updated 13 months ago by
Ram
43k • written 8.2 years ago by
statfa
▴ 760
73
votes
14
replies
4.3k
views
12 follow
Forum:
Things you wish you knew when entering the bioinformatics field
pitfalls
advice
updated 11 months ago by
Ram
43k • written 3.7 years ago by
jared.andrews07
★ 16k
14
votes
14
replies
1.9k
views
6 follow
Forum:
How do you process your reference data? (in genomic, metabolomic, transcriptomic, proteomic?)
OMICS
Databanks
updated 13 months ago by
Ram
43k • written 7.5 years ago by
Chloe Riou
▴ 40
17
votes
14
replies
2.0k
views
10 follow
Forum:
What would be the trend in next few years in NGS era?
NGS
sequencing
updated 12 months ago by
Ram
43k • written 5.5 years ago by
ahmad mousavi
▴ 800
9
votes
14
replies
2.9k
views
Forum:
Bookmark Questions Feature For Biostar
meta
updated 15 months ago by
Ram
43k • written 11.1 years ago by
Raygozak
★ 1.4k
7
votes
14
replies
2.5k
views
7 follow
Forum:
Why isn't GWAS used in oncology?
gwas
association
oncology
studies
somatic
cancer
updated 21 months ago by
LChart
3.9k • written 21 months ago by
Kermit
▴ 90
8
votes
14
replies
2.8k
views
Forum:
Portal of choice for literature commenting
literature
updated 2.3 years ago by
Ram
43k • written 9.7 years ago by
cdsouthan
★ 1.9k
47
votes
14
replies
5.2k
views
Forum:
Was FASTA ever popular?
FASTA
alignment
updated 13 months ago by
Ram
43k • written 7.6 years ago by
John
13k
20
votes
14
replies
2.2k
views
6 follow
Forum:
Reuse of publicly available datasets
publication
RNA-Seq
sequencing
updated 13 months ago by
Ram
43k • written 7.3 years ago by
sanathoi
▴ 10
30
votes
13
replies
3.8k
views
11 follow
Forum:
what is your daily must see bioinformatics web site?
learn
technology
updated 11 months ago by
Ram
43k • written 9.7 years ago by
Medhat
9.7k
15
votes
13
replies
2.2k
views
8 follow
Forum:
Can we consider Bioinformatics as a engineering discipline?
engineering
biology
updated 17 months ago by
Ram
43k • written 5.2 years ago by
anasjamshed
▴ 120
11
votes
13
replies
4.6k
views
6 follow
Forum:
NGS Data storage solutions for small organisations or big labs
big-data
HTS
storage
NGS
metagenomics
updated 11 months ago by
Ram
43k • written 4.9 years ago by
bioinfo
▴ 840
24
votes
13
replies
5.7k
views
6 follow
Forum:
The ethics of sci-hub
paywall
open-science
journals
publications
updated 13 months ago by
Ram
43k • written 7.9 years ago by
WouterDeCoster
47k
7
votes
13
replies
1.4k
views
Forum:
How do you validate and verify your pipeline's software updates?
Validation
Verification
Quality-Assurance
updated 7 months ago by
Ram
43k • written 7 months ago by
kieran
▴ 10
28
votes
13
replies
1.5k
views
6 follow
Forum:
Suppose you have a sequencer that can read the genome end-to-end. What aspects of bioinformatics will become irrelevant?
future
updated 17 months ago by
Ram
43k • written 7.6 years ago by
Ayaan
▴ 40
3
votes
13
replies
2.5k
views
Forum:
evaluate RNA extraction based on sequencing
sequencing
RNA-Seq
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
schelarina
▴ 50
34
votes
13
replies
6.2k
views
11 follow
Forum:
Best Way To Learn Bioinformatics For System Level Programmers.
NGS
HPC
updated 14 months ago by
Ram
43k • written 10.3 years ago by
amjadcsu
▴ 90
21
votes
13
replies
5.3k
views
12 follow
Forum:
User Friendly VCF Filtering Tools
vcf
variant-calling
updated 13 months ago by
Ram
43k • written 8.0 years ago by
andrew.j.skelton73
6.6k
8
votes
13
replies
2.9k
views
8 follow
Forum:
Commercial software for genomics / NGS / bioinformatics
NGS
software
genomics
updated 20 months ago by
artem barski
• 0 • written 20 months ago by
liorglic
★ 1.4k
19
votes
13
replies
2.7k
views
8 follow
Forum:
Can bioinformatics Phds be completely or almost completely done remotely?
PhD
updated 20 months ago by
Rob
6.6k • written 20 months ago by
tsomakiank
▴ 40
11
votes
13
replies
2.9k
views
Forum:
what is the difference between bioinformatician and Postdoc in Bioinformatics
career
updated 13 months ago by
Ram
43k • written 7.3 years ago by
Medhat
9.7k
31
votes
13
replies
16k
views
8 follow
Forum:
Should I Pursue A Bioinformatics Msc?
career
updated 15 months ago by
Ram
43k • written 11.3 years ago by
biostepho
▴ 70
19
votes
13
replies
3.1k
views
7 follow
Forum:
Has anyone tried the new LFQC compression scheme for FASTQ?
fastq
compression
updated 21 months ago by
Ram
43k • written 8.5 years ago by
Dan D
7.4k
32
votes
13
replies
11k
views
10 follow
Forum:
What Skills Do You Have To Have As A Phd Graduate In Bioinformatics?
genomics
phd
updated 15 months ago by
Ram
43k • written 11.8 years ago by
sentausa
▴ 650
37
votes
13
replies
3.6k
views
6 follow
Forum:
Bringing Back Downvote
meta
updated 14 months ago by
Ram
43k • written 10.9 years ago by
lh3
33k
1
vote
13
replies
2.8k
views
Forum:
Bioinformatics computer upgrade help
computer
updated 11 months ago by
Ram
43k • written 3.9 years ago by
truebeliever24
▴ 50
13
votes
13
replies
5.2k
views
6 follow
Forum:
What Next After Snp Identification
disease
genomics
ngs
updated 14 months ago by
Ram
43k • written 10.4 years ago by
AP
▴ 80
28
votes
13
replies
2.7k
views
Forum:
Are there any workshops which are tailored to non-beginners/intermediate bioinformatics?
workshop
updated 19 months ago by
Ram
43k • written 8.8 years ago by
Daniel
★ 4.0k
2
votes
13
replies
2.7k
views
8 follow
Forum:
Recommendation required for solution of computation requirements in Genomics field
DataAnalysis
NGS
Genomics
updated 3.1 years ago by
Ram
43k • written 3.1 years ago by
hafiz.talhamalik
▴ 350
15
votes
13
replies
4.3k
views
8 follow
Forum:
Does a PhD or work experience set you up better to do bioinformatics work in industry?
advice
industry
phd
updated 4 months ago by
benformatics
3.9k • written 18 months ago by
buhbs
▴ 30
29
votes
13
replies
3.7k
views
6 follow
Forum:
Map of bioinformatics or who is bioinformatician.
self-study
updated 13 months ago by
Ram
43k • written 7.5 years ago by
dshulgin
▴ 260
23
votes
13
replies
2.9k
views
8 follow
Forum:
Planning A Change To The Way User Reputation/Rankings Are Computed. Comments/Feedback Sought.
biostars
updated 15 months ago by
Ram
43k • written 10.8 years ago by
Istvan Albert
100k
1,000 results • Page
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Answer: Filter Genome for Specific Sites
Answer: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
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Answer: Elbow plot question (scRNA seq data analysis - scanpy tutorial)
by
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Thank you so much Dave.
Answer: Elbow plot question (scRNA seq data analysis - scanpy tutorial)
by
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★ 1.7k
The y axis represents the proportion of the total variance explained by each principal component. It's negative because the value (between…
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Hi Mohamed, I also thought the same thing but we run the risk of inserting other errors perhaps by modifying the function. I tried but I ha…
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Please do a few simple Google searches before asking others for help.
Comment: ICGEB - SLIBTEC NGS Workshop: Won Best Oral Presentation Award
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This post does not fit the theme of this forum.
Comment: ICGEB - SLIBTEC NGS Workshop: Won Best Oral Presentation Award
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Hi, Congratulations but this is not LinkedIn, we are not a place to showcase your professional accomplishments. This does not fall under t…
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Many (most?) programs related to NGS data analysis produce non-deterministic output (unless they explicitly offer an option to produce dete…
Comment: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
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For those samples it appears that raw data was not submitted. Just an assembly. $ esearch -db biosample -query SAMN08009548 | elink -…
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**I have already tried this code. listSamples with HNSC cancer and smokers. I need at least one supporting material to find out the survi…
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Anita
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Great, thank you!
Comment: Filter Genome for Specific Sites
by
Anita
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This is unhelpful and doesn't answer my question.
Comment: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
by
Harshita
• 0
It seems that the authors in this paper have used paired-end sequences only for their analysis, and for that, they would also have used the…
Comment: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
by
Harshita
• 0
Thank you so much for helping me out in this! I have used most of the sequences that are found in this table. But, some samples like the…
Answer: How to find SRA sequences of some fungal whole genome sequences if only Biosampl
by
GenoMax
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Looks like the samples are from this project: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA320483&o=acc_s%3Aa This table has the SR…
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Pierre Lindenbaum
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> My sites are in an Excel file right now ![enter image description here][1] <!-- was an American educator and academic administrator…
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