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1,000 results • Page
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Sort: Votes
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Views
Votes
Replies
13
votes
7
replies
5.8k
views
News:
Free HiSeq X Ten human genome fastq test data
HiSeq-X-Ten
Human-genome
Fastq
next-gen
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
rbagnall
★ 1.8k
13
votes
9
replies
2.6k
views
7 follow
News:
Inviting NEW Biostars moderators to join Biostars slack channel
slack
moderator
6 months ago by
GenoMax
141k
13
votes
2
replies
1.5k
views
News:
Thank you Biostars!
meta
updated 11 months ago by
Ram
43k • written 5.0 years ago by
Glory Basumata
▴ 140
13
votes
8
replies
2.7k
views
News:
NCBI is going to eliminate GI identifiers
ncbi
GI
updated 12 months ago by
Ram
43k • written 8.1 years ago by
Anima Mundi
★ 2.9k
12
votes
2
replies
443
views
News:
8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop
RNA-Seq
DNA-Seq
Illumina
15 days ago by
David Langenberger
11k
12
votes
2
replies
1.5k
views
News:
Free online Ensembl course, now with a fixed sign-up link
ensembl
course
training
updated 12 months ago by
Ram
43k • written 7.2 years ago by
Emily
23k
12
votes
7
replies
3.9k
views
News:
Welcome Ensembl REST with more endpoints!
ensembl
rest-api
updated 13 months ago by
Ram
43k • written 9.5 years ago by
Denise CS
★ 5.2k
12
votes
8
replies
7.1k
views
News:
rRNA Depletion / Poly-A Selection Responsible for RNA-seq Bias
rRNA-depletion
RNA-seq-bias
updated 13 months ago by
Ram
43k • written 9.8 years ago by
support
▴ 650
12
votes
8
replies
3.4k
views
News:
'Potential Rna-Dna Binding Site In Alu Repeat', Or 'Why Should I Allow Multiple Mapping Positions When Analyzing Chipseq Data?'
chipseq
rna
updated 14 months ago by
Ram
43k • written 10.8 years ago by
David Langenberger
11k
12
votes
4
replies
2.0k
views
News:
#NGSchool2018 summer school in bioinformatics
NGSchool
Personalised-Medicine
Nanopore
updated 11 months ago by
Ram
43k • written 5.9 years ago by
kzkedzierska
▴ 290
12
votes
0
replies
3.3k
views
News:
Looking For Feedback On The Json Output For Ncbi E-Utilities
ncbi
eutils
updated 14 months ago by
Ram
43k • written 11.4 years ago by
Chris Maloney
▴ 360
12
votes
3
replies
2.5k
views
News:
Google Summer of Code and Open Bioinformatics Foundation is looking for students
GSoC
open-source
updated 12 months ago by
Ram
43k • written 8.1 years ago by
Philipp Bayer
8.3k
12
votes
17
replies
4.1k
views
6 follow
News:
A programming language for living cells [Cello]
dna
sequence
research
language
updated 12 months ago by
Ram
43k • written 8.1 years ago by
Sukhi Singh
11k
11
votes
11
replies
1.8k
views
8 follow
News:
Python Data Visualization Course. Last 3 spots left
next-gen
updated 11 months ago by
Ram
43k • written 5.4 years ago by
carlopecoraro2
★ 2.5k
11
votes
9
replies
7.7k
views
News:
NovaSeq quality analysis
sequencing
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Brian Bushnell
20k
11
votes
1
reply
2.8k
views
News:
NGS Data Analysis Workshop for Beginners in Munich (full)
RNA-Seq
training
NGS
workshop
updated 21 months ago by
Ram
43k • written 7.7 years ago by
David Langenberger
11k
11
votes
25
replies
6.2k
views
15 follow
News:
Questions for the NCBI Next Generation Sequencing Online Workshop Can be Posted with the NCBI_NOW Tag
NCBI_NOW
updated 13 months ago by
Ram
43k • written 8.6 years ago by
DCGenomics
▴ 330
11
votes
0
replies
3.3k
views
News:
BWA 0.7.11 is out, supports ALT contigs
BWA
updated 13 months ago by
Ram
43k • written 9.3 years ago by
Devon Ryan
104k
11
votes
1
reply
4.2k
views
News:
GATB will provide developer support via Biostar
minia
dsk
gatb
updated 2.2 years ago by
Ram
43k • written 9.9 years ago by
Rayan Chikhi
★ 1.5k
11
votes
1
reply
2.1k
views
News:
Upcoming Hands-On Workshop: De Novo Transcriptome Assembly and Analysis
Workshop
Assembly
RNA-Seq
updated 12 months ago by
Ram
43k • written 7.9 years ago by
David Langenberger
11k
11
votes
13
replies
3.2k
views
News:
Ensembl datacentre shut-down: Friday 26th August - Tuesday 30th August 2016
Maintenance
Ensembl
updated 12 months ago by
Ram
43k • written 7.7 years ago by
Ben_Ensembl
★ 2.4k
11
votes
2
replies
2.4k
views
News:
Ensembl 76 is out
Genome-browser
Ensembl
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
Emily
23k
11
votes
2
replies
3.7k
views
News:
Coursera: Computational Molecular Evolution
course
updated 14 months ago by
Ram
43k • written 10.9 years ago by
Pierre Lindenbaum
161k
11
votes
2
replies
1.5k
views
News:
ASA discusses limitations of p-values what are the alternatives?
statistics
p-value
updated 12 months ago by
Ram
43k • written 8.1 years ago by
dariober
14k
10
votes
0
replies
2.1k
views
News:
Pan-Cancer Analysis of RNA Binding Proteins in ~7000 tumor samples
Pan-Cancer
mutations
TCGA
RNA-seq
cancer-driver
updated 11 months ago by
Ram
43k • written 6.3 years ago by
lsp03yjh
▴ 860
10
votes
1
reply
2.0k
views
News:
Run on 1st Berlin Summer School in NGS Data Analysis
DNA-Seq
RNA-Seq
NGS
updated 12 months ago by
Ram
43k • written 7.2 years ago by
David Langenberger
11k
10
votes
17
replies
3.4k
views
7 follow
News:
Tell us what you think of the ENA browser?
ena
updated 12 months ago by
Ram
43k • written 7.4 years ago by
Laura
★ 1.8k
10
votes
0
replies
2.9k
views
News:
Cfp: Camda 2013 Challenge: Big Data In Life Sciences
ngs
conference
updated 14 months ago by
Ram
43k • written 11.1 years ago by
okko.clevert
▴ 240
10
votes
2
replies
3.3k
views
News:
Biostars based Q&A for Bioconductor: http://support.bioconductor.org
RNA-Seq
bioconductor
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Pierre Lindenbaum
161k
10
votes
7
replies
2.4k
views
News:
Free draft copy of book on bioinformatics tools
alignment
Assembly
RNA-seq
next-gen
updated 15 months ago by
Ram
43k • written 8.9 years ago by
ugly.betty77
★ 1.1k
10
votes
7
replies
2.9k
views
News:
Linux for Biologists e-book (free to read online)
linux
python
galaxy
conda
virtual-machine
2.6 years ago by
vimalkvn
▴ 320
10
votes
4
replies
983
views
News:
Good morning
good
morning
updated 19 months ago by
Istvan Albert
100k • written 19 months ago by
Kevin Blighe
87k
10
votes
4
replies
2.6k
views
News:
Ensembl 77 is out
ensembl
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Emily
23k
10
votes
1
reply
3.1k
views
News:
Ucsc: Dna Sequences In Web Pages Indexed By Bing.Com / Microsoft Research (All Phenotype And Literature Tracks)
web
ucsc
updated 14 months ago by
Ram
43k • written 10.3 years ago by
Pierre Lindenbaum
161k
10
votes
4
replies
1.8k
views
News:
3rd Berlin Summer School in NGS Data Analysis (2 seats just became available)
NGS
RNA-Seq
DNA-Seq
updated 11 months ago by
Ram
43k • written 5.3 years ago by
David Langenberger
11k
10
votes
0
replies
3.4k
views
News:
1000 Genomes data on GRCh38
1000Genomes
GRCh38
alts
alignment
updated 20 months ago by
Ram
43k • written 8.5 years ago by
fairley
▴ 100
10
votes
4
replies
1.2k
views
News:
RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS
transcriptomics
workshop
updated 13 months ago by
kng
▴ 30 • written 14 months ago by
David Langenberger
11k
9
votes
5
replies
10k
views
8 follow
News:
Online course: Learn Bioinformatics in 100 hours
biostars
online-course
updated 14 months ago by
Ram
43k • written 6.7 years ago by
Istvan Albert
100k
9
votes
5
replies
8.8k
views
News:
A New Rest Based Api For Kegg: Kyoto Encyclopedia Of Genes And Genomes
kegg
api
updated 14 months ago by
Ram
43k • written 11.4 years ago by
wchknudt
▴ 50
9
votes
2
replies
14k
views
News:
Bio-Linux 8 is now available
genome
rna-seq
alignment
Assembly
next-gen
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
rtliu
★ 2.2k
9
votes
4
replies
2.5k
views
7 follow
News:
fastp 0.22 released, with new FASTQ deduplication feature.
fastp
updated 9 months ago by
Ram
43k • written 2.7 years ago by
chen
★ 2.5k
9
votes
3
replies
3.3k
views
News:
New Human Genome Assembly (Grch38) Released
human-genome
assembly
updated 14 months ago by
Ram
43k • written 10.3 years ago by
Pierre Lindenbaum
161k
9
votes
0
replies
2.2k
views
News:
Commercial advertising on Biostars
meta
biostars
advertising
updated 13 months ago by
Ram
43k • written 9.6 years ago by
Istvan Albert
100k
9
votes
3
replies
4.8k
views
News:
Bioinformatics Contest 2020. Call for problems
contest
updated 10 months ago by
Ram
43k • written 4.6 years ago by
alserg
▴ 920
9
votes
4
replies
1.6k
views
News:
Human Cell Atlas Data Coordination Platform Data Release Questionaire
RNA-Seq
updated 11 months ago by
Ram
43k • written 6.2 years ago by
Laura
★ 1.8k
9
votes
5
replies
3.1k
views
News:
The NIH Software Discovery Index | We invite your comments
NIH
software-catalog
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Sean Davis
26k
9
votes
4
replies
3.7k
views
News:
Conference Announcement - Camda 2013
conference
classification
updated 14 months ago by
Ram
43k • written 11.3 years ago by
okko.clevert
▴ 240
9
votes
5
replies
3.6k
views
News:
SAMTOOLS 1.4 released
samtools
updated 11 months ago by
Ram
43k • written 7.1 years ago by
Pierre Lindenbaum
161k
9
votes
6
replies
2.2k
views
News:
No more hidden solutions in bioinformatics
precision-medicine
genome-sequencing
updated 15 months ago by
Ram
43k • written 8.9 years ago by
HG
★ 1.2k
8
votes
10
replies
4.0k
views
News:
New versions of Minia and DSK (2.0.x)
minia
dsk
assembly
gatb
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
Rayan Chikhi
★ 1.5k
1,000 results • Page
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Recent Votes
Answer: Seurat merge and batch correction
Comment: How to convert plink files to Hapmap Format
Comment: How to convert plink files to Hapmap Format
Comment: How to convert plink files to Hapmap Format
Comment: How to convert plink files to Hapmap Format
Comment: How to convert plink files to Hapmap Format
Answer: Missing protein (VEGF-A) in String db
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Comment: Missing protein (VEGF-A) in String db
by
shalespringer
• 0
Thank you for replying here; this helped me figure out why MAPK10 was missing from my results. It was also marked as a pseudogene in the En…
Comment: How to convert plink files to Hapmap Format
by
Sofia
• 0
These are the first lines of the output: (Please is it normal to have NA in the P value column ?) CHR …
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
atowns21
• 0
So I used the barcodes that I created (combos of positions 1-10 and 11-20) and I obtained similar alignment stats as the paper I pulled the…
Comment: How to convert plink files to Hapmap Format
by
Sofia
• 0
Thank you so much, it actually worked!
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Hi @efc1e545 , First a caveat. the information we most need in order to help guide you to a successful conclusion is not provided in thi…
Answer: Sequence read length shorter than flow cell specification
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14k
The company probably had you share your run with someone who needed the extra bases. So you get the extra bases free. Just use them unle…
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
by
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43k
Thank you, the `csvtk spread` is super useful. I usually import into R using `lapply` then `Reduce` using `merge` but this might be easier.
Comment: Annovar using R package
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DKA
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Thank you for your guidance. The thing is that I am unfamiliar with using such environments, unfortunately.
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Open a new question, with details.
Comment: Normalize scRNAseq data to housekeeping genes to compare several datasets
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I recommend https://bioconductor.org/books/3.18/OSCA.basic/normalization.html as well as the "advanced" section in this book.
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by
QX
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thank you!
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Hello, I have more or less same experimental setting and was wondering how you proceeded with your analysis? Can I reach its GitHub reposit…
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> I ask this as some BLAST command fields as scinames or sblastnames do not give any output with a classic nt BLAST If that information is…
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by
5heikki
11k
This has been discussed [many times][1] [1]: https://www.biostars.org/p/76551/
Answer: why renaming Idents in Seurat object doesn't work?
by
Bioinfotec
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I think when you give indent to seuObj : ```r Idents(seuObj) <- 'RNA_snn_res.0.1' ``` You may wrongly assign other value to it such as `…
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