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Thanks. Really appreciate your help with this. This site is such a great resource.
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It is possible that these drugs may not have been directly used in TCGA. Authors could have looked for mutations known to be acted on by th…
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Are you thinking about a specific scenario? If so, can you provide more info? I think the basic answer is that, yes, your choice of group C…
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Bedtools [intersect][1] allows you to specify the fraction of overlap between two BED (or BAM) files using the F/f/r flags. You could split…
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Sorry, I should have been more specific. By "that list" I mean what's populated in the Therapeutic Agents tab when no filters are applied. …
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Because `dba.analyze` is not meant to be run directly on a peaks file. Have you read the documentation?
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