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I found the question and ASK the GPT4 turbo
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Your approach seems reasonable and well-informed, though it's perhaps less customary in the field, which could be why you haven't found pap…
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the samples that are `./.` have no coverage (or not enough to call a genotype) and the `0/0` are homozygous reference
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Hello, I want to know that why my gVCF files have "./." besides "0/0", "1/1"?
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![enter image description here][1]
[1]: /media/images/15eedc1a-b2c6-4966-be39-b5173dab
And I confused with the file that has "./." and…
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![enter image description here][1]
[1]: /media/images/16fd502c-4e01-4f56-8562-0e0d4aac
Okay, this is the merged gVCF file.
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