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121,990 results • Page
649 of 2440
Sort: Rank
Rank
Views
Votes
Replies
0
votes
0
replies
1.0k
views
Misunderstanding on calculating Ka/Ks values
Nucleotide
4.4 years ago by
Abdukhalim Khon
• 0
6
votes
13
replies
8.8k
views
Choosing a high soft thresholding power in WGCNA, is it reasonable?
WGCNA
updated 4.3 years ago by
andres.firrincieli
3.9k • written 4.4 years ago by
aristelliger
▴ 10
0
votes
0
replies
705
views
Where to find hepatitis virus infectious status information available in TCGA or ICGC database when study HCC?
manipulation
HCV
clincal
data
HCC
ICGC
3.1 years ago by
Dude
• 0
1
vote
8
replies
5.1k
views
6 follow
DESeq2 count matrix read in
deseq2
R
updated 2.6 years ago by
Ram
45k • written 4.4 years ago by
Gregor Rot
▴ 550
0
votes
0
replies
584
views
Need help contig assembly
Contig
updated 4.4 years ago by
Ram
45k • written 4.4 years ago by
saingamp
• 0
2
votes
3
replies
1.6k
views
MACS2 does not giving same result before and after chromosome extraction from bam file
chromosome
samtools
extract
peakcalling
macs2
updated 4.4 years ago by
seidel
11k • written 4.4 years ago by
buffealo
▴ 130
0
votes
0
replies
1.4k
views
findMotifs vs findMotifsGenome, inequality of results
homer
motifs
4.4 years ago by
boczniak767
▴ 880
10
votes
13
replies
9.2k
views
snp density plot
snp
updated 4.4 years ago by
Curls
▴ 40 • written 6.0 years ago by
evelyn
▴ 230
9
votes
11
replies
6.0k
views
BED file: Find intervals that overlap a certain percentage and keep the longest one
Bed
bedtools
bash
bedops
4.4 years ago by
biomonte
▴ 220
1
vote
0
replies
1.1k
views
Job:
Senior Bioinformatician in Molecular Screening and Omics Research - AstraZeneca, Cambridge, UK
omics
screening
AstraZeneca
updated 4.3 years ago by
Ram
45k • written 4.4 years ago by
Sergio Martínez Cuesta
▴ 230
0
votes
2
replies
1.6k
views
What is current the best available rat lung single cell RNA seq dataset for cell type annotation? any recommendations ?
SingleR
scRNAseq
4.4 years ago by
FantasticAI
▴ 60
0
votes
1
reply
2.7k
views
IGV not showing transcripts
transcripts
IGV
updated 4.4 years ago by
ATpoint
89k • written 4.4 years ago by
shaden
▴ 20
0
votes
0
replies
831
views
How can I convert a molecule written in SMILE in SMART?
superimposition
ligands
open_babel
4.4 years ago by
Agnese
• 0
1
vote
1
reply
1.4k
views
Homer motif analysis
Homer
R
motif
updated 4.4 years ago by
seidel
11k • written 4.4 years ago by
Rorey
• 0
0
votes
4
replies
3.6k
views
KaKs calculator
Nucleotide
Substitutions
updated 4.2 years ago by
Elaine Wang
• 0 • written 4.4 years ago by
Abdukhalim Khon
• 0
1
vote
0
replies
937
views
How does FDRtool work?
rnaseq
fdrtool
deseq2
r
pvalue
4.4 years ago by
emmagervide
▴ 10
4
votes
2
replies
1.1k
views
Select only protein coding Ensembl ID
R
genes
RNAseq
EdgeR
4.4 years ago by
sumitguptabt
▴ 30
0
votes
0
replies
627
views
How to simulate phenotype from two random multivariant normal distributed variable and calculate statistical power!
mvnorm
simulation
phenotype
4.4 years ago by
gaaraqrq
• 0
0
votes
0
replies
620
views
bedtools genomecov fractions not summing to 1
genomecov
bedtools
4.4 years ago by
maxrwjones
▴ 60
0
votes
0
replies
1.0k
views
Tool:
IPC 2.0: prediction of isoelectric point and pKa dissociation constants
deep-learning
isoelectric-point
2D-PAGE
pKa
updated 2.3 years ago by
Ram
45k • written 4.4 years ago by
Lukasz Kozlowski
• 0
2
votes
2
replies
1.1k
views
Why clusters look different in single nuclear RNA Seq.
snRNA
clustering
seurat
updated 4.4 years ago by
Kevin Blighe
89k • written 4.4 years ago by
snaik
▴ 10
0
votes
1
reply
1.0k
views
Power calculation for RIP-seq
RIP-seq
CHIP-seq
updated 4.4 years ago by
ATpoint
89k • written 4.4 years ago by
mimA
▴ 30
2
votes
2
replies
1.4k
views
TCGA samples
TCGA
Samplestype
4.4 years ago by
mrashad
▴ 80
1
vote
2
replies
1.2k
views
How can a mapping be performed without alignment?
mapping
alignment
genome
map
updated 4.4 years ago by
prasundutta87
▴ 730 • written 4.4 years ago by
ssko
▴ 20
13
votes
9
replies
4.3k
views
How to Write Loop For Trimming Every FastQ File Individually
Trimming
Nanopore
Fastq
Rna-Seq
updated 4.4 years ago by
Carlo Yague
9.0k • written 4.4 years ago by
santos48
▴ 40
2
votes
3
replies
5.6k
views
Using Biopython to access MUSCLE
biopython
alignment
updated 4.4 years ago by
tzwang
▴ 10 • written 8.7 years ago by
jtbioinfo
▴ 10
0
votes
1
reply
1.7k
views
How to plot scaling curves for Hi-C data?
Hi-C
updated 4.4 years ago by
Алёна Константиновна
• 0 • written 4.9 years ago by
Linus
• 0
2
votes
6
replies
2.0k
views
ATAC-seq protocol stop-point check
ATAC-seq
4.4 years ago by
Lord.Mor
• 0
0
votes
1
reply
980
views
Trying to use python regular expressions to filter fasta file sequence headers
filter
fasta
QC
python
read
updated 4.4 years ago by
cpad0112
21k • written 4.4 years ago by
Ash
• 0
2
votes
2
replies
1.6k
views
Stop BWA mem trimming
fasta2sam
BWA
BWA-mem
alignment
updated 4.3 years ago by
Ram
45k • written 4.4 years ago by
shahramsaghaei85
• 0
0
votes
2
replies
1.1k
views
Error in vsd_adjusted_log2[rownames(subset(res, !is.na(padj) & padj < : subscript out of bounds
Rstudio
DeSeq2
heatmap
4.4 years ago by
mrinsmrids
• 0
5
votes
3
replies
2.4k
views
PSSM from alignment
Alignment
PSSM
4.4 years ago by
Vladimir Leshuk
▴ 50
0
votes
0
replies
529
views
QTL for half-sib families
families
QTL
Half-sib
SNPs
4.4 years ago by
irenecobo88
• 0
0
votes
2
replies
1.5k
views
tximport for gene level summarization of 9 quant.sf files
salmon
tximport
rna-seq
updated 4.4 years ago by
Ram
45k • written 4.4 years ago by
Cody
• 0
4
votes
6
replies
2.7k
views
Empty output file after trim primers with Cutadapt
cutadapt
updated 4.4 years ago by
Ram
45k • written 4.4 years ago by
ALEJANDRO
• 0
16
votes
13
replies
21k
views
9 follow
How to work out Z score for heatmaps for RNA seq dataset
R
updated 16 months ago by
robert.flynn.21
▴ 10 • written 4.4 years ago by
v.johnson
▴ 30
0
votes
0
replies
721
views
Plant sRNA seq analysis pipelines
sRNA
pipelines
updated 4.4 years ago by
Ram
45k • written 4.4 years ago by
weixuchu63
▴ 10
2
votes
3
replies
1.1k
views
Read mapping statistics
phg
updated 4.4 years ago by
Ram
45k • written 4.4 years ago by
kathrynm
• 0
3
votes
2
replies
2.0k
views
Nucleotide BLAST
BLAST
updated 4.4 years ago by
lieven.sterck
16k • written 4.4 years ago by
timothy.kirkwood
▴ 140
4
votes
7
replies
1.7k
views
Small RNA Seq Analysis for newcomers...
RNA-Seq
updated 4.4 years ago by
weixuchu63
▴ 10 • written 5.6 years ago by
tushar131189
▴ 20
0
votes
0
replies
1.0k
views
How can I use PopGenome set.synnonsyn() function on whole genome vcf data?
vcf
R
set.synnonsyn
synonymous-sites
PopGenome
4.4 years ago by
apc
• 0
6
votes
6
replies
2.3k
views
Trimming an alignment around a given sequence
pairwise
script
crop
alignment
4.4 years ago by
QLFblaireau
▴ 30
0
votes
1
reply
905
views
Trimgalore for just R2
reads
trimming
trimgalore
WGBS
updated 4.4 years ago by
GenoMax
154k • written 4.4 years ago by
Georgia
• 0
0
votes
1
reply
1.3k
views
dada2: plotQualityProfile - Error: IncompleteFinalRecord
r
amplicon
dada2
4.3 years ago by
ben.tatton
• 0
0
votes
1
reply
656
views
Network analysis issues
networkanalysis
updated 4.4 years ago by
seidel
11k • written 4.4 years ago by
claire.garfield
• 0
0
votes
11
replies
4.2k
views
Regression assumptions - fitted and residual plots
assumptions
regression
updated 4.4 years ago by
Student
▴ 30 • written 4.4 years ago by
Elizabeth
• 0
0
votes
0
replies
975
views
Fisher's exact test for comparing TCR clonotype counts
R
TCR-seq
4.4 years ago by
pm2012
▴ 140
0
votes
0
replies
714
views
Too few mutations to analyze MutSigCV
MutSigCV
mutations
4.4 years ago by
asmariyaz23
▴ 10
1
vote
2
replies
1.4k
views
Download raw RNA-seq data from TCGA
TCGA
RNA-seq
4.4 years ago by
qwzhang0601
▴ 80
0
votes
2
replies
1.1k
views
HOMER peak-motif relationship as direct-indirect binding
homermotif
directbinding
indirectbinding
4.4 years ago by
buffealo
▴ 130
121,990 results • Page
649 of 2440
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