Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : this year
all time
today
this week
this month
this year
460 results • Page
2 of 10
Sort: replies
Rank
Views
Votes
Replies
22
votes
15
replies
8.9k
views
11 follow
Forum:
RNASeq user experience with Novogene?
RNA-Seq
updated 11 months ago by
Ram
43k • written 5.8 years ago by
ivanarg2
▴ 80
6
votes
15
replies
1.7k
views
Forum:
PhD Bioinformatics on GWAS
SNP
GWAS
genome
PHD
updated 11 months ago by
Ram
43k • written 4.3 years ago by
davidenoma
▴ 50
23
votes
15
replies
5.1k
views
6 follow
Forum:
On the usage of Golang
assembly
next-gen
alignment
updated 11 months ago by
Ram
43k • written 5.6 years ago by
Lucas Peres
▴ 80
21
votes
15
replies
2.1k
views
9 follow
Forum:
Working abroad without a PhD
career
updated 11 months ago by
Ram
43k • written 4.6 years ago by
Rox
★ 1.4k
28
votes
15
replies
2.3k
views
12 follow
Forum:
Should bioinformaticians learn the scientific names of plants and animals?
sequence
updated 11 months ago by
Ram
43k • written 5.8 years ago by
ivan.radonov
▴ 10
10
votes
15
replies
2.1k
views
Forum:
How should reference genome fasta files be distributed by UCSC?
reference-genome
fasta
freeze
ucsc-genome-browser
updated 11 months ago by
Jeremy Leipzig
22k • written 14 months ago by
Maximilian Haeussler
★ 1.6k
8
votes
15
replies
2.4k
views
7 follow
Forum:
How to identify your analytic data is true?
RNA-Seq
ChIP-Seq
next-gen-sequencing
updated 11 months ago by
Ram
43k • written 6.7 years ago by
Hughie
▴ 80
3
votes
14
replies
2.1k
views
6 follow
Forum:
Search for gene variants
next-gen
updated 11 months ago by
Ram
43k • written 5.7 years ago by
Rm
8.3k
12
votes
14
replies
2.5k
views
8 follow
Forum:
Recovering bam files after unknown deletion in the storage
photorec
bam
sequencing
written 4.9 years ago by
Gabriel Wajnberg
▴ 70
19
votes
14
replies
2.1k
views
Forum:
What is the amount of sequencing data produced annually?
data
research
sequencing
updated 7 months ago by
Jeremy Leipzig
22k • written 7 months ago by
vincenthus
▴ 70
9
votes
14
replies
2.4k
views
Forum:
MS Bioinformatics Project
assembly
sequencing
alignment
R
SNP
updated 11 months ago by
Ram
43k • written 6.1 years ago by
Moneeb Bajwa
▴ 10
17
votes
14
replies
1.9k
views
10 follow
Forum:
What would be the trend in next few years in NGS era?
NGS
sequencing
updated 11 months ago by
Ram
43k • written 5.5 years ago by
ahmad mousavi
▴ 800
17
votes
14
replies
3.3k
views
Forum:
Asking for feedback on a Python library for computing alignments
alignment
Python
updated 11 months ago by
Alexander
▴ 220 • written 2.3 years ago by
bernhard.liebl
▴ 60
5
votes
14
replies
2.1k
views
Forum:
immediate help needed for genome sequence analysis of bacteria
genome
miseq
webinar
paired-end
updated 11 months ago by
Ram
43k • written 7.1 years ago by
mariomemory
• 0
73
votes
14
replies
4.3k
views
12 follow
Forum:
Things you wish you knew when entering the bioinformatics field
pitfalls
advice
updated 10 months ago by
Ram
43k • written 3.6 years ago by
jared.andrews07
★ 16k
11
votes
13
replies
4.5k
views
6 follow
Forum:
NGS Data storage solutions for small organisations or big labs
big-data
HTS
storage
NGS
metagenomics
updated 11 months ago by
Ram
43k • written 4.9 years ago by
bioinfo
▴ 830
15
votes
13
replies
4.1k
views
8 follow
Forum:
Does a PhD or work experience set you up better to do bioinformatics work in industry?
advice
industry
phd
updated 3 months ago by
benformatics
3.9k • written 18 months ago by
buhbs
▴ 30
7
votes
13
replies
1.4k
views
Forum:
How do you validate and verify your pipeline's software updates?
Validation
Verification
Quality-Assurance
updated 6 months ago by
Ram
43k • written 7 months ago by
kieran
▴ 10
1
vote
13
replies
2.8k
views
Forum:
Bioinformatics computer upgrade help
computer
updated 10 months ago by
Ram
43k • written 3.8 years ago by
truebeliever24
▴ 50
4
votes
13
replies
1.7k
views
Forum:
Looking for Participants: Meenta NovaSeq RunShare Beta
RunShare
next-gen
NovaSeq
updated 11 months ago by
Ram
43k • written 4.8 years ago by
Torrey Ah-Tye
▴ 10
30
votes
13
replies
3.7k
views
11 follow
Forum:
what is your daily must see bioinformatics web site?
learn
technology
updated 10 months ago by
Ram
43k • written 9.6 years ago by
Medhat
9.7k
26
votes
12
replies
7.5k
views
6 follow
Forum:
Mapping God Found ‘Scientifically Dishonest’ By Anonymous Peer Reviewers
ngs
updated 12 months ago by
zyan2005
▴ 10 • written 10.5 years ago by
johnblue81
▴ 50
12
votes
12
replies
1.4k
views
7 follow
Forum:
Who qualify as a world class bioinformatician as seen in job ads
world-class
bioinformatician
qualification
updated 11 months ago by
Ram
43k • written 4.1 years ago by
scolobs
• 0
21
votes
12
replies
3.6k
views
Forum:
How to Use Biostars Part-3: Formatting Text and Using GitHub Gists
meta
how-to
documentation
3 months ago by
Ram
43k
4
votes
12
replies
1.5k
views
Forum:
publicly available data
arrayexpress
GEO
SRA
updated 11 months ago by
Ram
43k • written 4.6 years ago by
Konstantinos Yeles
▴ 110
22
votes
12
replies
1.8k
views
6 follow
Forum:
What were the most impactful Bioinformatics papers published this year
papers
publications
updated 11 months ago by
Ram
43k • written 4.4 years ago by
c_u
▴ 520
31
votes
12
replies
1.0k
views
7 follow
Forum:
Nextflow and self-made pipelines opinion
nextflow
pipeline
data-analysis
9 weeks ago by
karlaarz
▴ 90
18
votes
12
replies
2.5k
views
6 follow
Forum:
why GATK makes things more complicated ?
genomics
updated 11 months ago by
Ram
43k • written 5.2 years ago by
Learner
▴ 280
12
votes
12
replies
3.0k
views
Forum:
Programming interview via Skype
programming-test
interview
updated 11 months ago by
Ram
43k • written 5.9 years ago by
padgaus
▴ 50
23
votes
12
replies
2.0k
views
6 follow
Forum:
Whole-Exome Analysis on a Mainstream Desktop PC
NGS
whole-exome
updated 10 months ago by
Ram
43k • written 3.9 years ago by
David Langenberger
11k
15
votes
11
replies
4.7k
views
9 follow
Forum:
Methodological problems are extremely common for enrichment analysis - beware the pitfalls before you publish
GSEA
DAVID
enrichment-analysis
-geneontology
updated 11 months ago by
Ram
43k • written 2.1 years ago by
mark.ziemann
★ 1.9k
17
votes
11
replies
1.0k
views
Forum:
How to overcome the imposter syndrome in bioinformatics?
advice
3 months ago by
sil_bioinfo
▴ 40
14
votes
11
replies
6.8k
views
7 follow
Forum:
Do you need a deduplication tool for FASTQ data in fastp?
deduplication
fastp
updated 11 months ago by
Ram
43k • written 4.9 years ago by
chen
★ 2.5k
18
votes
11
replies
2.4k
views
8 follow
Forum:
Create a File format to store Variant
hgvs
json
variant
updated 11 months ago by
Ram
43k • written 5.9 years ago by
sacha
★ 2.4k
22
votes
11
replies
3.4k
views
Forum:
ExpressionSet in the age of tidyverse
expressionset
R
bioconductor
updated 11 months ago by
Ram
43k • written 6.0 years ago by
igor
13k
21
votes
11
replies
2.5k
views
6 follow
Forum:
Rust bioinformatics projects ideas
projects
scRNA-seq
RNA-seq
Rust
updated 5 months ago by
Jeremy Leipzig
22k • written 14 months ago by
bompipi95
▴ 150
25
votes
11
replies
3.7k
views
6 follow
Forum:
Site Use Guidelines
meta
biostars
Guidelines
updated 10 days ago by
Ram
43k • written 14.6 years ago by
Istvan Albert
100k
23
votes
11
replies
2.1k
views
9 follow
Forum:
file and directory management best practices
file-management
updated 10 months ago by
Ram
43k • written 3.7 years ago by
nkinney06
▴ 140
8
votes
11
replies
1.8k
views
Forum:
What makes a good bionformatics prediction service from the point of user experience?
server
prediction-service
updated 11 months ago by
Ram
43k • written 6.5 years ago by
aquaq
▴ 40
21
votes
11
replies
2.0k
views
Forum:
Most important International Big Data Projects: Genetics and Epigenetics
big-data
updated 11 months ago by
Ram
43k • written 5.8 years ago by
Shicheng Guo
★ 9.4k
9
votes
11
replies
3.3k
views
7 follow
Forum:
Fields with biggest demand for bioinformatics?
career
updated 11 months ago by
Ram
43k • written 5.3 years ago by
BioinformaticsLad
▴ 200
13
votes
11
replies
4.7k
views
Forum:
Anyone using Ubuntu on Windows (WSL)?
ubuntu
wsl
updated 11 months ago by
Ram
43k • written 5.8 years ago by
Batu
▴ 250
10
votes
11
replies
4.2k
views
7 follow
Forum:
What made you interested in Bioinformatics?
career
updated 11 months ago by
Ram
43k • written 6.4 years ago by
Hussain Ather
▴ 990
21
votes
11
replies
2.0k
views
8 follow
Forum:
what I want to do after the PhD?
PhD
updated 11 months ago by
Ram
43k • written 7.1 years ago by
zizigolu
★ 4.3k
15
votes
10
replies
2.4k
views
6 follow
Forum:
help identifying bioinformatics operations tools
database
next-gen
operations
genomics
updated 11 months ago by
Ram
43k • written 5.5 years ago by
jsmedmar
▴ 80
16
votes
10
replies
1.1k
views
6 follow
Forum:
F*up Night style events for Bioinformatics ? Comment if you're interested!
mistakes
updated 5 weeks ago by
Madelaine Gogol
5.3k • written 5 weeks ago by
Ann
★ 2.4k
26
votes
10
replies
4.4k
views
6 follow
Forum:
Why not merging?
fastq
sequencing
updated 11 months ago by
Ram
43k • written 6.8 years ago by
finswimmer
16k
9
votes
10
replies
17k
views
8 follow
Forum:
Open Source Bioinformatics projects for beginners
Open-Source
Beginners
updated 3 months ago by
Saransh
• 0 • written 6.3 years ago by
Eugenia84
▴ 40
9
votes
10
replies
1.7k
views
Forum:
Brainstorming: applying bioinformatics NOT to public field. Ideas and perspectives
applied-sciences
data-analysis
updated 11 months ago by
Ram
43k • written 6.1 years ago by
lessismore
★ 1.3k
2
votes
10
replies
1.2k
views
Forum:
AddHealth Omics Data Source
AddHealthOmics
updated 11 months ago by
Ram
43k • written 5.4 years ago by
belevitt
• 0
460 results • Page
2 of 10
Recent Votes
A: extract dendrogram cluster from pheatmap
extract dendrogram cluster from pheatmap
Answer: Searching for gene in multiple genomes
Comment: RNA velocity for smart-seq2 dataset
Answer: RNA velocity for smart-seq2 dataset
Answer: RNA velocity for smart-seq2 dataset
Comment: Help with choosing a model species for Augustus for a de novo assembled genome.
Recent Locations •
All
Türkiye,
just now
UCLA,
just now
Chennai, India,
4 minutes ago
Switzerland,
11 minutes ago
Cambridge, MA,
16 minutes ago
Italy,
19 minutes ago
Germany,
20 minutes ago
Recent Awards •
All
Commentator
to
dsull
★ 6.0k
Scholar
to
BioinfGuru
★ 1.7k
Popular Question
to
drajangirija
• 0
Popular Question
to
Thanujay S
• 0
Popular Question
to
SHN
▴ 40
Popular Question
to
Rob
▴ 170
Scholar
to
GenoMax
142k
Recent Replies
Comment: creating batch colum for batch correction
by
Expert
▴ 10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Pindel Segmentation Fault Error
by
Ruqaiya
• 0
This the tool still problematic?
Comment: Segmentation error while using a tool
by
Ruqaiya
• 0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
• 0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★ 27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
• 0
Hey @Ruqaiya! Can you please give more details on why smalt is opted here? According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA
by
Thanujay S
• 0
Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool
by
Ruqaiya
• 0
I tried the 2nd option only. I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
Comment: filtering before dada2
by
GenoMax
142k
> I encountered a significant decrease in the percentage of merged reads. You can check with `bbmerge.sh` from BBMap suite to see how many…
Comment: HCL database download
by
GenoMax
142k
Isn't the download link available above the plot: http://bis.zju.edu.cn/HCL/data/DGE/Adult-Transverse-Colon1_dge.txt.gz
Comment: fastq screen aligner no specified.
by
GenoMax
142k
You need to change this configuration file to point it to the location where the aligner executable can be found. So as an example followi…
Answer: Design matrix Differential expression analysis
by
Gordon Smyth
★ 7.1k
The expression levels do not change but the way that you have parametrized the expression levels does change. The two design matrices give…
Comment: The GDC Legacy Archive is retiring soon.
by
lcordeiro
▴ 40
Hi Zhenyu, do you happen to know how I can download metadata for some of the legacy files? I downloaded several IDATs from the legacy data …
Answer: Force PLINK2 to neglect chrX as the sex chromosome
by
chrchang523
10k
(cross-posted from https://groups.google.com/g/plink2-users/c/Qphx_6BpPII ) You need to use --chr-set, not --allow-extra-chr, to specify…
Traffic: 1598 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6