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1,000 results • Page
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Sort: Votes
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Votes
Replies
715
votes
159
replies
104k
views
100 follow
News:
The Biostar Handbook. A bioinformatics e-book for beginners.
training
tutorial
News
handbook
updated 4 months ago by
Biostar
1.5k • written 6.2 years ago by
Istvan Albert
96k
122
votes
42
replies
8.6k
views
21 follow
News:
Help Make Biostar Better! Add Your Feedback, Opinions And Suggestions.
biostar
meta
News
updated 6.1 years ago by
jonasmst
▴ 400 • written 10.2 years ago by
Istvan Albert
96k
81
votes
39
replies
5.9k
views
11 follow
News:
State Of Biostar - Future Directions (January 2013)
biostar
News
updated 10.0 years ago by
João Rodrigues
★ 2.5k • written 10.1 years ago by
Istvan Albert
96k
59
votes
31
replies
3.3k
views
12 follow
News:
Example of how bioinformaticians can publish in Scientific Reports (by nature publishing group) using publicly available NGS data
publication
NGS
News
updated 6.1 years ago by
helene
▴ 50 • written 6.1 years ago by
David Langenberger
9.8k
57
votes
24
replies
5.4k
views
14 follow
News:
Join us in building a bioinformatics resource: The Biostar Handbook
biostar-handbook
updated 4 months ago by
Ram
37k • written 7.4 years ago by
Istvan Albert
96k
54
votes
24
replies
3.1k
views
12 follow
News:
Big news from Microsoft. BASH on windows.
windows
News
written 6.9 years ago by
poisonAlien
★ 3.1k
50
votes
17
replies
3.2k
views
News:
Biostars 3.0 is now under testing. It has groups, charms and other interesting features.
biostar
meta
updated 7 months ago by
Ram
37k • written 7.9 years ago by
Istvan Albert
96k
48
votes
13
replies
24k
views
10 follow
News:
The New Grch38 Human Genome Browser Has Arrived!
ucsc
assembly
GRCh38
hg38
updated 12 months ago by
Ram
37k • written 8.9 years ago by
Giovanni M Dall'Olio
27k
45
votes
19
replies
5.5k
views
8 follow
News:
Gamestorming For Bioinformatics
News
10.4 years ago by
Giovanni M Dall'Olio
27k
45
votes
16
replies
4.9k
views
12 follow
News:
Google announces DeepVariant
genome
deep learning
google
News
updated 5.2 years ago by
Chris Miller
22k • written 5.2 years ago by
Hussain Ather
▴ 970
33
votes
5
replies
3.3k
views
News:
FINAL CALL: Epigenetics Workshop - DNA Methylation Data Analysis (some last seats available)
Workshop
Epigenetics
Bisulfite Sequencing
News
updated 6.3 years ago by
David Langenberger
9.8k • written 6.7 years ago by
Adele Feuerstein
▴ 460
32
votes
6
replies
12k
views
7 follow
News:
Ncbi Releases Entrez Direct, The Entrez Utilities On The Unix Command Line
ncbi
linux
command-line
entrez
pubmed
genbank
News
updated 15 months ago by
Ram
37k • written 9.0 years ago by
Pierre Lindenbaum
152k
31
votes
4
replies
6.0k
views
News:
Rosalind: A Novel Bioinformatics Education Platform
bioinformatics
education
News
10.4 years ago by
phcompeau
▴ 310
27
votes
9
replies
3.5k
views
News:
OSX 10.11 released 30th Sep will be "rootless"
mac
osx
updated 4 months ago by
Ram
37k • written 7.4 years ago by
John
13k
27
votes
7
replies
3.1k
views
News:
The Biostar Swarm: A Visualization
biostar
updated 14 months ago by
Ram
37k • written 10.0 years ago by
Istvan Albert
96k
25
votes
7
replies
2.3k
views
6 follow
News:
Who qualifies to be a bioinformatician?
resume
bioinformatician
vc
updated 7 months ago by
Ram
37k • written 7.8 years ago by
Pierre Lindenbaum
152k
25
votes
7
replies
5.7k
views
News:
Pubmed Commons : A System That Enables Researchers To Share Their Opinions About Scientific Publications
ncbi
pubmed
News
9.3 years ago by
Pierre Lindenbaum
152k
24
votes
21
replies
5.6k
views
9 follow
News:
Misunderstood parameter of NCBI BLAST
alignment
blast
News
4.3 years ago by
Farbod
★ 3.3k
24
votes
7
replies
4.0k
views
News:
#Bioinformatics Crowdcoding
News
updated 8.9 years ago by
Rad
▴ 800 • written 9.6 years ago by
Pierre Lindenbaum
152k
23
votes
7
replies
3.9k
views
News:
Research accounts on GitHub
github
News
git
updated 16 months ago by
Ram
37k • written 8.7 years ago by
Pierre Lindenbaum
152k
22
votes
3
replies
2.6k
views
News:
Biostar: 10,000 Question Milestone
News
updated 9.7 years ago by
Medhat
9.5k • written 9.7 years ago by
Istvan Albert
96k
22
votes
9
replies
5.9k
views
News:
Epigenetics Workshop - DNA Methylation Data Analysis
bisulfite-sequencing
workshop
epigenetics
updated 4 weeks ago by
Ram
37k • written 7.7 years ago by
David Langenberger
9.8k
22
votes
10
replies
4.9k
views
News:
samtools/bcftools/htslib 1.0 released
htslib
samtools
bcftools
updated 13 months ago by
Ram
37k • written 8.5 years ago by
rtliu
★ 2.2k
21
votes
7
replies
7.1k
views
News:
Survey: Rna-Seq Analysis For Differential Gene/Transcript Expression [Updated With Results]
rna-seq
alignment
differential
gene
transcript
News
10.2 years ago by
bodhisattvax
▴ 250
21
votes
16
replies
5.0k
views
6 follow
News:
Pandora's Toolbox - a collection of bioinformatics programs
Assembly
alignment
RNA-Seq
updated 10 months ago by
Ram
37k • written 8.1 years ago by
ugly.betty77
★ 1.1k
21
votes
11
replies
8.7k
views
6 follow
News:
NovaSeq from Illumina (updated info)
illumina
NovaSeq
News
5.3 years ago by
GenoMax
125k
20
votes
3
replies
2.3k
views
News:
Nature Comment: Core services: Reward bioinformaticians
career-path
updated 7 months ago by
Ram
37k • written 7.8 years ago by
rtliu
★ 2.2k
19
votes
4
replies
1.9k
views
News:
How to analyze NGS data: An overview of nine different IT solutions
NGS
RNA-Seq
DNA-Seq
News
updated 6.3 years ago by
Lars
▴ 910 • written 6.3 years ago by
David Langenberger
9.8k
19
votes
11
replies
6.3k
views
News:
Solid Software Tools: Denovo Assembly/Xsq Tools Pipeline Mirrored At Biostar
News
updated 9 months ago by
Ram
37k • written 10.4 years ago by
Istvan Albert
96k
18
votes
11
replies
3.3k
views
News:
Full Genome Sequencing Service 30x whole human genome sequencing for $3,490 (project cancelled)
genome
next-gen-sequencing
updated 13 months ago by
Ram
37k • written 8.4 years ago by
hcatlin
▴ 100
18
votes
3
replies
2.1k
views
News:
LAST CALL: Next-Generation Sequencing Data Analysis: A Practical Introduction (Frankfurt, Germany) - 2 seats left
DNA-Seq
NGS
Workshop
Variant-Calling
updated 6 months ago by
Ram
37k • written 5.9 years ago by
David Langenberger
9.8k
17
votes
7
replies
8.4k
views
News:
Upcoming NGS Workshop: A Beginner's Guide to NGS Data Analysis
workshop
Assembly
transcriptomics
RNA-Seq
updated 11 months ago by
Ram
37k • written 8.2 years ago by
David Langenberger
9.8k
17
votes
9
replies
3.2k
views
News:
My Ncbi Curriculum Vitae Web Application: Sciencv
ncbi
job
News
updated 9.4 years ago by
Giovanni M Dall'Olio
27k • written 9.4 years ago by
Pierre Lindenbaum
152k
17
votes
6
replies
8.3k
views
News:
Final registration deadline: September 15th - Bioinformatics Hands-On NGS Data Analysis Workshops 2014
News
methylation
rna-seq
updated 16 months ago by
Ram
37k • written 8.9 years ago by
David Langenberger
9.8k
16
votes
2
replies
4.4k
views
News:
Samtools/htslib/bcftools 1-3 released
samtools
htslib
bcftools
News
updated 6.4 years ago by
xing
▴ 10 • written 7.1 years ago by
Devon Ryan
102k
15
votes
3
replies
6.3k
views
News:
Top Bioinformatics Contributions Of 2013
bioinformatics
News
updated 9.0 years ago by
Gjain
5.7k • written 9.2 years ago by
ugly.betty77
★ 1.1k
15
votes
2
replies
10k
views
News:
Breaking News - Illumina MiniSeq
next-gen-sequencing
updated 6 months ago by
Ram
37k • written 7.1 years ago by
IV
★ 1.3k
15
votes
4
replies
2.2k
views
News:
Call For Nominations: 2013 Benjamin Franklin Award
News
updated 9.9 years ago by
lh3
33k • written 10.0 years ago by
Pierre Lindenbaum
152k
15
votes
18
replies
7.2k
views
6 follow
News:
New Free Community Tutorial Website For Bioinformatics Learning
chip-seq
snp
News
rna-seq
genome
updated 16 months ago by
Ram
37k • written 9.5 years ago by
rob234king
▴ 610
15
votes
4
replies
3.9k
views
News:
Workshop: Genomic Data Visualization and Interpretation (Berlin, Germany)
R
next-gen
dataviz
GenVisR
News
5.9 years ago by
carlopecoraro2
★ 2.2k
14
votes
2
replies
4.9k
views
News:
Open Targets, identifying targets for drug development in the treatment of diseases.
Tools
Bioinformatics
Drug
open targets
database
News
4.2 years ago by
Denise CS
★ 5.2k
14
votes
11
replies
2.2k
views
6 follow
News:
Announcing bioSyntax: Syntax highlighting for biological files
bioinformatics
computational biology
News
updated 4.8 years ago by
ababaian
▴ 50 • written 5.1 years ago by
anicet.ebou
▴ 170
14
votes
3
replies
3.3k
views
News:
Updated: Conference/Symposium/Seminar/Workshop alert 2018-2019
bioinformatics
symposium
seminar
conference
News
updated 4.3 years ago by
sangram_keshari
▴ 260 • written 4.7 years ago by
lakhujanivijay
5.7k
14
votes
1
reply
2.1k
views
News:
The Gene Ontology Handbook (open access)
handbook
training
news
tutorial
GO
News
6.1 years ago by
Christophe Dessimoz
▴ 740
14
votes
6
replies
6.4k
views
News:
FINAL CALL: NGS Workshop - A Beginner's Guide to NGS Data Analysis (2 last seats)
NGS
RNA-Seq
workshop
updated 8 weeks ago by
Ram
37k • written 7.6 years ago by
David Langenberger
9.8k
14
votes
4
replies
3.0k
views
News:
FULL: NGS Data Analysis Workshop for Beginners in Munich (29 June - 1 Juli 2016)
RNA-Seq
next-gen
NGS
updated 6 months ago by
Ram
37k • written 7.0 years ago by
David Langenberger
9.8k
14
votes
5
replies
3.0k
views
News:
Science Article On Social Influence Bias On Voting Patterns ("Herding") With Impact On Biostar.
biostar
meta
News
updated 9.5 years ago by
Mary
11k • written 9.5 years ago by
Michael Dondrup
52k
13
votes
8
replies
2.2k
views
News:
NCBI is going to eliminate GI identifiers
GI
number
identifier
ncbi
News
6.9 years ago by
Anima Mundi
★ 2.9k
13
votes
2
replies
1.1k
views
News:
Thank you Biostars!
acknowledgement
thank you
biostars
forum
News
3.7 years ago by
Glory Basumata
▴ 140
13
votes
7
replies
5.1k
views
News:
Free HiSeq X Ten human genome fastq test data
HiSeq-X-Ten
Human-genome
Fastq
next-gen
updated 14 months ago by
Ram
37k • written 8.5 years ago by
rbagnall
★ 1.8k
1,000 results • Page
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Recent Votes
Filtering out samples by FORMAT attributes using bcftools
Deseq2 with one factor and multiple levels
Answer: Error while trying to install salmon
Answer: Forcing Installation Of DMRcate
Gene Expression Omnibus Data Mining (IA): Quick and easy download of GEO data
SNP calling
Comment: Annotating ENS codes to gene name
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Recent Replies
Comment: ceres score in crispr screen
by
edus_bioinfo
▴ 20
they didnt provide a good tutorial thats why i cannot determine whether i have problem in input files ps: but i cannot run the demo files
Comment: ceres score in crispr screen
by
edus_bioinfo
▴ 20
:) technical support. > my run is giving Error: Encountered internal Bowtie 2 exception (#1) Command: /Users/sudeeris/Downloads/bowtie2-…
Comment: Network analysis for two Factors
by
seidel
10k
Have you looked at any tutorials? Three are many out there. ([1][1], [2][2], [3][3], [etc.][4]) Do you have a preferred language? [1]: …
Comment: ceres score in crispr screen
by
seidel
10k
Are you looking for moral support or technical support? Have you tried using it with an older version of R and bioconductor? (i.e. circa 20…
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
If you aren't willing to provide more precise information than this, sufficient for a reader to reproduce what you're seeing, I will delete…
Answer: Error while trying to install salmon
by
Chris
▴ 10
Donwloading the package from conda (https://anaconda.org/conda-forge/boost/files?version=1.60.0) worked for me wget https://anaconda.org/…
Answer: finding error to run edgeR, error in ploting MDS and after that in model matrix
by
Gordon Smyth
★ 5.4k
First issue is that GEO series matrix files can't be read using `read.delim`. Second issue is the data are from Agilent microarrays and …
Comment: PLINK2 selecting variants based on INFO score
by
m.c.roozen
• 0
I have tried that (the .pvar file contains the "1:10586" form as ID which I mentioned above) which leads to the same output as above, 0 var…
Answer: samtools markdup in Rsamtools
by
joe
▴ 350
You can run any system command from inside R using `system()`. This works well if there is a single command without many dependencies. For …
Comment: samtools markdup in Rsamtools
by
Pierre Lindenbaum
152k
> But other solutions are also fine: bash, nextflow, snakemake
Answer: samtools markdup in Rsamtools
by
ATpoint
68k
My honest opinion: Do processing of sequencing data on the standard command line with samtools. There is no need for the added complexity t…
Comment: To batch correct or analyse separately?
by
predeus
★ 1.8k
Another great and up-to-date resource is this: https://www.sc-best-practices.org/preamble.html
Comment: PLINK2 selecting variants based on INFO score
by
chrchang523
9.9k
The --exclude file must use the same variant IDs as your .pvar file. You should elaborate on what seemed to go wrong when you tried to arr…
Comment: phylogeny
by
炫
• 0
Hello, my problem is the same as yours, did you finally solve this problem?
Comment: phylogeny
by
炫
• 0
您好,我的问题和您的一模一样,请问您这个问题最终解决了吗
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