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News: Nature Index: Novogene is teaming up with laboratories worldwide for life sciences and human health research
NGS Nature Sequencing
updated 17 months ago by 43k • written 2.1 years ago by ▴ 420
3
votes
1
reply
629
views
News: Free web seminars related to small non-coding RNA bioinformatics
smallRNA microRNA
updated 17 months ago by 43k • written 2.0 years ago by ▴ 60
1
vote
1
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2.6k
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News: R package PopGenome: http://popgenome.weebly.com/
R population-genomics popgenome VCF
updated 14 months ago by 43k • written 9.1 years ago by ▴ 50
3
votes
1
reply
845
views
News: PrecisionFDA has won a FedHealth IT award!!
platform cloud-based precision-medicine award
updated 11 months ago by 43k • written 5.0 years ago by ▴ 150
1
vote
1
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735
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News: Online Course - A Practical Introduction to NGS Data Analysis (September 15-17, 2021)
workshop DNAseq RNAseq
updated 2.8 years ago by ▴ 580 • written 2.8 years ago by 11k
0
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1
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980
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News: ::LAST CALL:: RNA-Seq Data Analysis Workshop, February 28 - March 3, 2022 in Berlin
RNAseq Transcriptomics RNA
2.3 years ago by David Langenberger 11k
4
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1
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1.4k
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News: The 1000 Genomes Project Data Portal Beta Release
1000genomes next-gen SNP
updated 13 months ago by 43k • written 8.0 years ago by ★ 1.8k
5
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1
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2.6k
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News: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
programming course R
updated 14 months ago by 43k • written 9.6 years ago by ★ 1.7k
2
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1
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1.8k
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News: Us Researchers: Help Influence Stem Education With New Nsf Strategies (Deadline Next Tuesday)
education genomics
updated 14 months ago by 43k • written 10.3 years ago by 11k
3
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1
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1.4k
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News: GATK returns to a fully open-source license
gatk
updated 12 months ago by 43k • written 7.0 years ago by 100k
1
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1
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1.3k
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News: New International MScProgram: Data Science and Information Technologies (DSIT) from the University of Athens [New Application Deadline 6 Aug 18]
studies data-science
updated 11 months ago by 43k • written 5.8 years ago by ★ 1.3k
0
votes
1
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198
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News: Online NGS Training Program
next-gen-sequencing RNA-Seq ChIP-Seq
updated 11 months ago by 43k • written 4.9 years ago by • 0
1
vote
1
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2.4k
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News: Bioinformatics for Cancer Genomics Workshop
Cancer-Genomics
updated 21 months ago by 43k • written 8.3 years ago by ▴ 30
0
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1
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1.1k
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News: New Alexa skill provides voice-based access to Protein Data Bank data
protein-structure pdb
updated 12 months ago by 43k • written 6.5 years ago by • 0
0
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1
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1.2k
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News: Registration deadline: Comparative genomics
snp SVs
updated 11 months ago by 43k • written 5.7 years ago by ★ 2.5k
5
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1
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2.3k
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News: New version of the GATB library
minia next-gen gatb dsk
updated 2.3 years ago by 43k • written 9.3 years ago by ▴ 730
1
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1
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1.9k
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News: 'Spring School 2013 - Epigenetics Of Civilization Diseases', May 27Th - 31St 2013, In Leipzig, Germany
epigenetics
updated 14 months ago by 43k • written 11.5 years ago by 11k
1
vote
1
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942
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News: ONLINE TRAINING -GENOME ASSEMBLY USING OXFORD NANOPORE SEQUENCING
genome assembly Nanopore
updated 15 months ago by 43k • written 3.3 years ago by ★ 2.5k
2
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1
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480
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News: Successful NCBI NIAID Codeathon on VCF Files in SARS-CoV-2 Genomics
NCBI Codeathon
updated 7 months ago by 10k • written 7 months ago by ▴ 410
0
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1
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1.4k
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News: Online Workshop - A Practical Introduction to NGS Data Analysis (May 27-29,2020)
NGS DNA-seq Workshop
updated 11 months ago by 43k • written 4.1 years ago by 11k
2
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1
reply
2.7k
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News: Workshop: Programming For Evolutionary Biology
programming RNA-seq
updated 14 months ago by 43k • written 11.4 years ago by 11k
6
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1
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2.0k
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News: Contest: Antibody Marathon Match Problem: ABCSpeedup
contest
updated 14 months ago by 43k • written 9.4 years ago by 161k
8
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1
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2.7k
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News: An Interesting Article On Bioinformatics Education With Some Press For Biostar
meta biostars
updated 15 months ago by 43k • written 10.8 years ago by 11k
2
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1
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2.1k
views
News: Igb 8 Webinar Starts At 1 Pm Eastern
visualization genome-browser bam rna-seq
updated 14 months ago by 43k • written 10.6 years ago by ★ 2.4k
1
vote
1
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1.8k
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News: Article: Crowdfunding Genomics And Bioinformatics
crowdfunding
updated 14 months ago by 43k • written 10.6 years ago by 8.3k
0
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1
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1.5k
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News: How Are Virtual Clinical Trials Changing the Clinical Trial Landscape? Learn More October 21, 2016
clinical-trials
updated 13 months ago by 43k • written 7.6 years ago by ▴ 60
6
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1
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2.5k
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News: FastQC Version 0.11.1 released
genome next-gen-sequencing
updated 14 months ago by 43k • written 10.0 years ago by ★ 2.2k
0
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1
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1.1k
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News: Results are now Available for the precisionFDA Truth Challenge V2
genome
updated 15 months ago by 43k • written 3.8 years ago by ▴ 150
0
votes
1
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793
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News: Advanced R Programming Course
R
updated 12 months ago by 43k • written 6.0 years ago by ★ 2.5k
5
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1
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1.4k
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News: Bioinformatics Contest 2017
Contest
updated 17 months ago by 43k • written 7.4 years ago by 7.1k
0
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1
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1.5k
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News: Live Webinar on RNA-Seq Data Analysis on 28 Feb 2018
splice-variants RNA-Seq alignment Strand-NGS
updated 12 months ago by 43k • written 6.3 years ago by ▴ 70
6
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1
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2.0k
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News: Massively Differential Bias Between Two Widely Used Illumina Library Preparation Methods For Small Rna Sequencing
illumina RNA-seq
updated 14 months ago by 43k • written 10.4 years ago by 11k
0
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1
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1.1k
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News: ::FINAL CALL:: Online Course | A Practical Introduction to NGS Data Analysis | March 30 - April 1, 2022
DNA-Seq RNA-Seq Workshop
2.2 years ago by David Langenberger 11k
0
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1
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623
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News: Bioinformatics Training Program
next-gen-sequencing genome RNA-Seq
updated 11 months ago by 43k • written 4.9 years ago by • 0
16
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1
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5.0k
views
News: Samtools/htslib/bcftools 1-3 released
htslib samtools bcftools
updated 13 months ago by 43k • written 8.4 years ago by 104k
14
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1
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2.4k
views
News: The Gene Ontology Handbook (open access)
training handbook GO
updated 13 months ago by 43k • written 7.4 years ago by ▴ 740
1
vote
1
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679
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News: Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude hackathon
14 months ago by jared.andrews07 ★ 16k
0
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1
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887
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News: :: FINAL CALL :: Bioinformatics Pipeline Development with Nextflow (only 3 seats left)
pipeline nextflow development
2.6 years ago by David Langenberger 11k
4
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1
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1.9k
views
News: Bioinformatics Contest 2018
contest
updated 12 months ago by 43k • written 6.4 years ago by ▴ 40
2
votes
1
reply
1.6k
views
News: BIOSG17 Workshop on High Throughput Computing in Bioinformatics/Biomedicine using OSG
Workshop OSG Biomedicine HTC
updated 12 months ago by 43k • written 6.8 years ago by ▴ 10
3
votes
1
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2.7k
views
News: Ngs Session At Biocomp Bg 2012 Conference!
next-gen-sequencing
updated 15 months ago by 43k • written 12.0 years ago by ▴ 50
1
vote
1
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1.2k
views
News: Codondex $100,000 Bio Hunt Awards
RNA-Seq sequencing gene
updated 13 months ago by 43k • written 7.6 years ago by • 0
6
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1
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3.0k
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News: The Art of Bioinformatics Scripting. A new book in the Biostar Handbook collection.
education
updated 3.7 years ago by ▴ 10 • written 4.5 years ago by 100k
0
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1
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991
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News: FINAL CALL: RNA-Seq Data Analysis Workshop (March 11 - 14, 2024 in Berlin, Germany)
NGS RNA-Seq Workshop
3 months ago by David Langenberger 11k
0
votes
1
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636
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News: EMBL-EBI virtual course | Introduction to RNA-seq and functional interpretation
RNA-seq
updated 7 months ago by 43k • written 7 months ago by • 0
5
votes
1
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1.6k
views
News: 2-day WORKSHOP on SNAKEMAKE
next-gen
updated 12 months ago by 43k • written 5.9 years ago by ★ 2.5k
11
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1
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2.1k
views
News: Upcoming Hands-On Workshop: De Novo Transcriptome Assembly and Analysis
Workshop Assembly RNA-Seq
updated 13 months ago by 43k • written 8.0 years ago by 11k
3
votes
1
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1.2k
views
News: UniProt: Change of FT and CC section in UniProtKB text format
uniprot protein
updated 11 months ago by 43k • written 4.7 years ago by ★ 2.4k
4
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1
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1.2k
views
News: Bioinformatics Workflows with Nextflow
Netflow reproducibility Workflows
updated 11 months ago by 43k • written 4.4 years ago by ★ 2.5k
3
votes
1
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2.5k
views
News: Variathon V0.1 - 2013 - Comparing Existing Or New Pipelines For Variant Calling In Terms Of Accuracy And Efficiency
ngs conference
updated 14 months ago by 43k • written 11.2 years ago by 161k
1,000 results • Page 7 of 20
Recent Votes
constructing pangenome through psvcp
Differential Expression with limma: Contrast and Design Matrix, combinatorial approach valid?
Differential Expression with limma: Contrast and Design Matrix, combinatorial approach valid?
Answer: RNAseq coverage vs depth for transcript isoform expression?
Answer: ChatGPT optimized for bioinformatics questions
Comment: ChatGPT optimized for bioinformatics questions
C: How can I perform Differential expression analysis with just one control and one
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Recent Replies
Comment: constructing pangenome through psvcp by analyst ▴ 50
Fixed the issue by updating nucmer version.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU by GenoMax 142k
Can you create a small test database (`makeblastdb`) from your query file and try to run the search against the same file and see if that w…
Comment: calculating genomic coverage/ base overlap in R by 1769mkc ★ 1.2k
you can `dput(head(df)` for the both the data frame so that other can test for possible solutions
Comment: Broad and Narrow peaks by ATpoint 82k
What is your question? It's unclear.
Comment: Help with Biopython for Beginner by Joe 21k
One question before offering more solutions: are you trying to learn Python with this as an example problem, or are you trying to find the …
Answer: RNAseq coverage vs depth for transcript isoform expression? by Gordon Smyth ★ 7.2k
See the exploration of isoform precision vs read length and sequencing depth in our paper: https://doi.org/10.1093/nar/gkad1167. Table 1 o…
Comment: How to handle duplicated genes in TCGA data? by txema.heredia ▴ 130
Why does the tool require gene symbols and not ensembl ids? Is it retrieving information from somewhere else? If so, your best bet is to fi…
Comment: how to treat the replicates while performing WGCNA by mavy ▴ 10
Thank you so much for your response . Really appreciate it. I will try the way you mentioned and will get back if I have any query
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU by hophuquy0944 • 0
i have the same error, i used high performance computer, here is my code to set memory. srun --nodes=1 --ntasks=1 --cpus-per-task=24 -…
Comment: Overlapping Ranges within Granges object by Alex Reynolds 35k
Yes, `bedmap` will perform operations on one or two BED files.
Comment: B allele frequency (BAF) by aidangcruickshank ▴ 10
Apologies for resurrecting this post, but any idea what that functions "regions" paramater takes? Would it be a GRanges object? The documen…
Comment: How to handle duplicated genes in TCGA data? by Ngrin • 0
Thanks @txema.heredia.The tool I am going to use only accepts gene symbols. This is the reason. So I cannot use ENS IDs.
Answer: Design for complex RNA-Seq experiment using Deseq2 by swbarnes2 14k
This is a rather small experiment, I don't know that you can establish a meaningful baseline for each patient with a single pre sample, and…
Comment: GG Sankey plot by LauferVA 4.2k
@bk11 i changed this comment to an answer. if you disagree please let me know. thanks for sharing your knowledge. VAL
Comment: ComplexHeatmap - How to change fontsize of rowAnnotation by hannes.bongartz • 0
Thanks for the input. Unfortunately, that didn't help either. I appreciate any other tips. Thank you
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