65
votes
3
replies
285k
views
65
votes
24
replies
16k
views
14 follow
updated 6 weeks ago by
Ram
41k
•
written 13.8 years ago by
Pierre Lindenbaum
158k
65
votes
27
replies
6.9k
views
14 follow
updated 8 months ago by
Ram
41k
•
written 7.7 years ago by
harne.priyanka
▴
110
65
votes
10
replies
3.2k
views
6 follow
updated 5 months ago by
Ram
41k
•
written 12.6 years ago by
Eric Normandeau
11k
65
votes
26
replies
13k
views
11 follow
updated 8 months ago by
Ram
41k
•
written 4.7 years ago by
finswimmer
16k
65
votes
9
replies
48k
views
7 follow
65
votes
26
replies
19k
views
13 follow
Forum:
Macosx For Bioinformatics?
updated 9 months ago by
Ram
41k
•
written 10.0 years ago by
Eric Normandeau
11k
64
votes
24
replies
2.7k
views
12 follow
updated 6 months ago by
Ram
41k
•
written 5.2 years ago by
Molecular_genetics
▴
80
64
votes
8
replies
8.1k
views
7 follow
updated 9 months ago by
Ram
41k
•
written 10.6 years ago by
Obi Griffith
20k
64
votes
26
replies
13k
views
7 follow
Tutorial:
Parallel processing in R
updated 8 months ago by
Ram
41k
•
written 6.2 years ago by
Kevin Blighe
86k
64
votes
9
replies
104k
views
10 follow
64
votes
29
replies
15k
views
15 follow
63
votes
15
replies
13k
views
updated 6 months ago by
Ram
41k
•
written 5.1 years ago by
finswimmer
16k
63
votes
11
replies
15k
views
9 follow
updated 9 months ago by
Ram
41k
•
written 10.4 years ago by
Malachi Griffith
19k
63
votes
9
replies
3.8k
views
updated 9 months ago by
Ram
41k
•
written 10.5 years ago by
Istvan Albert
99k
63
votes
27
replies
26k
views
18 follow
updated 9 months ago by
Ram
41k
•
written 11.0 years ago by
Click downvote
▴
720
63
votes
28
replies
3.6k
views
11 follow
updated 7 months ago by
Ram
41k
•
written 7.6 years ago by
ablanchetcohen
★
1.2k
62
votes
24
replies
41k
views
12 follow
62
votes
17
replies
34k
views
7 follow
updated 9 months ago by
Ram
41k
•
written 8.6 years ago by
xinhui.wang
▴
530
62
votes
29
replies
7.1k
views
14 follow
updated 10 months ago by
Ram
41k
•
written 8.6 years ago by
Manu Prestat
4.1k
62
votes
95
replies
18k
views
8 follow
62
votes
22
replies
62k
views
16 follow
62
votes
16
replies
33k
views
18 follow
62
votes
14
replies
192k
views
9 follow
61
votes
6
replies
9.3k
views
61
votes
16
replies
7.4k
views
14 follow
updated 10 months ago by
Samuel Lampa
★
1.3k
•
written 3.1 years ago by
shenwei356
8.3k
61
votes
14
replies
19k
views
13 follow
61
votes
70
replies
13k
views
21 follow
Forum:
Biostar 2.0 released
updated 9 months ago by
Ram
41k
•
written 9.6 years ago by
Istvan Albert
99k
61
votes
14
replies
11k
views
11 follow
updated 6 weeks ago by
Ram
41k
•
written 14.2 years ago by
Istvan Albert
99k
61
votes
51
replies
21k
views
9 follow
61
votes
23
replies
54k
views
15 follow
60
votes
14
replies
12k
views
16 follow
updated 9 months ago by
Ram
41k
•
written 6.7 years ago by
WouterDeCoster
47k
60
votes
2
replies
7.2k
views
updated 9 months ago by
Ram
41k
•
written 11.3 years ago by
Istvan Albert
99k
60
votes
17
replies
33k
views
16 follow
updated 11 months ago by
Ram
41k
•
written 10.4 years ago by
Carlos Borroto
★
2.1k
60
votes
3
replies
32k
views
60
votes
28
replies
7.9k
views
27 follow
updated 8 months ago by
Ram
41k
•
written 9.2 years ago by
Istvan Albert
99k
60
votes
18
replies
3.6k
views
10 follow
updated 9 months ago by
Ram
41k
•
written 13.4 years ago by
Andrewjgrimm
▴
460
60
votes
25
replies
21k
views
17 follow
updated 6 weeks ago by
Ram
41k
•
written 13.9 years ago by
Giovanni M Dall'Olio
28k
60
votes
52
replies
42k
views
23 follow
60
votes
21
replies
3.3k
views
14 follow
59
votes
43
replies
20k
views
18 follow
59
votes
31
replies
4.4k
views
12 follow
updated 7 months ago by
Ram
41k
•
written 6.9 years ago by
David Langenberger
10k
59
votes
25
replies
4.2k
views
8 follow
updated 5 months ago by
Ram
41k
•
written 3.3 years ago by
telroyjatter
▴
220
58
votes
25
replies
39k
views
15 follow
Tutorial:
Protocol To Downlad TCGA Data From GDC
updated 8 months ago by
Ram
41k
•
written 7.3 years ago by
Shicheng Guo
★
9.3k
58
votes
30
replies
11k
views
13 follow
updated 18 days ago by
Ram
41k
•
written 13.6 years ago by
Khader Shameer
18k
57
votes
15
replies
4.5k
views
9 follow
Forum:
Entice Biologists To Learn R
updated 9 months ago by
Ram
41k
•
written 12.2 years ago by
Madelaine Gogol
5.3k
57
votes
22
replies
25k
views
7 follow
updated 9 months ago by
Kevin Blighe
86k
•
written 4.1 years ago by
Arindam Ghosh
▴
510
57
votes
19
replies
27k
views
6 follow
updated 9 months ago by
Ram
41k
•
written 11.1 years ago by
David Langenberger
10k
57
votes
43
replies
15k
views
8 follow
57
votes
9
replies
5.5k
views
14 follow
updated 7 months ago by
Ram
41k
•
written 7.5 years ago by
Shicheng Guo
★
9.3k
Recent Votes
Recent Locations •
All
Chile, just now
Barcelona, Spain, 1 minute ago
United States, 6 minutes ago
United States, 13 minutes ago
UK, 16 minutes ago
United States, 17 minutes ago
United States, 18 minutes ago
Recent Awards •
All
Popular Question to
beausoleilmo
▴
560
Commentator to
Brian Bushnell
19k
Popular Question to
Gama313
▴
120
Popular Question to
nanodano
▴
30
Popular Question to
shome
▴
10
Popular Question to
Malachi Griffith
19k
Scholar to
jared.andrews07
★
16k
Recent Replies
Comment: Should I scale all genes in single cell Seurat?
by
synat.keam
▴
80
Thanks, António for your kind and detailed responses. You helped clear my doubt about scaling!
Kind Regards,
Synat
Comment: Using metagenome assembly and binning to identify and mitigate contamination in
by
Brian Bushnell
19k
It's not a silly question! And yes, it can be done. JGI is currently testing various binning tools to try to find the best protocol for t…
Answer: GO categorization
by
geneontologyhelp
▴
270
[We have this in our FAQ][1]. PANTHER version 18.0, which powers the enrichment analysis on our homepage, has [143 species][2] loaded and …
Comment: Problematic fastq files...How can we trust them?
by
blackadder
▴
30
Thanks for the feedback fellas! I agree with the aforementioned!
Comment: Which program, tool, or strategy do you use to visualize genomic rearrangements?
by
cmdcolin
★
3.4k
i collect a large list of tools for visualization, some are specialized for SVs and re-arrangements. you can filter by tag (SV, CNV, compar…
Answer: The number of variations in the pan-genome is reduced compared to the variations
by
Jordan M Eizenga
▴
410
If variants overlap in the genome, `vg deconstruct` will combine them into one locus with multiple alleles. If your input VCF has a lot of …
Answer: How to find node Postion and source(sample) ?
by
Jordan M Eizenga
▴
410
You can use `vg find -P` for this. This command is not really designed to be used frequently throughout the genome (each invocation loads t…
Comment: How Can I move the scattered dots more closer into the center of box ?
by
Brian Bushnell
19k
I would just draw them in by hand where you want them.
Comment: How to identify CG, CHG, or CHH from MeDIP data
by
Tm
★
1.1k
I know that CpG types can be identified using whole genome bisulphite data. But could it be possible using MeDIP data too?
We tried using Q…
Comment: Problematic fastq files...How can we trust them?
by
Brian Bushnell
19k
I'd have to agree there... while you can generally recover a fastq to the point that it is spec-compliant, you don't know how or why the f…
Answer: Finding human .vcf files online to download
by
cmdcolin
★
3.4k
----------
some common ones include
1000 genomes vcf (large, multi-sample) http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/
…
Comment: GO categorization
by
m.habib
•
0
Thanks Istvan for your reply. I think these programs will do the same as Trinotate. Trinotate searches against numerous databases and gener…
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
by
jv
★
1.2k
I wonder if using cell hashing, which would allow pooling of cells from multiple samples before droplet formation, could improve things her…
Comment: Where Can I Find The Basepair Positions Of Chromosome Bands?
by
Malachi Griffith
19k
And the hg38 version can be found here:
https://hgdownload.soe.ucsc.edu/goldenPath/hg38/database/cytoBand.txt.gz
And for convenience, upda…
Answer: How Can I move the scattered dots more closer into the center of box ?
by
Trivas
★
1.5k
You added a position dodge on your boxplot but not on your points.
Traffic: 1382 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6