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121,621 results • Page
576 of 2433
Sort: Rank
Rank
Views
Votes
Replies
4
votes
5
replies
2.2k
views
Getting cDNA sequence from NCBI
fetch
sequence
gene
ncbi
updated 3.9 years ago by
GenoMax
152k • written 3.9 years ago by
Ibrahim Tanyalcin
★ 1.2k
3
votes
2
replies
1.6k
views
DiffBind - low number of significant peaks for one contrast
diffbind
ATAC
3.8 years ago by
CB
▴ 20
0
votes
0
replies
599
views
Docking
Docking
to
docking
Polymer
ligand
updated 3.9 years ago by
GenoMax
152k • written 3.9 years ago by
nimrahzafar14
• 0
7
votes
6
replies
2.0k
views
Can non-driver mutations disrupt the function of proteins and further affect a cellular pathway?
driver
somatic
annotation
VCF
oncoplot
updated 3.9 years ago by
Collin
▴ 1000 • written 3.9 years ago by
Zahra
▴ 110
1
vote
1
reply
3.3k
views
Library id - SRA submission
library
id
SRA
updated 3.9 years ago by
GenoMax
152k • written 3.9 years ago by
Mariela
▴ 10
3
votes
3
replies
1.9k
views
Differential expression analysis between normal/cancer on recount2 data
recount
GTEX
TCGA
RNA-seq
batch
updated 3.9 years ago by
Kevin Blighe
89k • written 3.9 years ago by
erica.fary
▴ 20
0
votes
5
replies
2.8k
views
How can I do this oncoplot using complexheatmap
oncoplot
complexheatmap
3.9 years ago by
573356741
• 0
0
votes
2
replies
3.2k
views
Filtering relevant Gene Ontology (GO) results from Gene Set Enrichment Analysis (GSEA)
GSEA
leadingedgeanalysis
DESeq2
updated 3.9 years ago by
rodolfo.peacewalker
▴ 390 • written 3.9 years ago by
Ayesha
• 0
5
votes
7
replies
6.2k
views
Bedtools - converting multiple bam files to bed
BED
Bedtools
Python
BAM
to
3.9 years ago by
rbravos87
• 0
0
votes
0
replies
553
views
Tool for calculating base-level error rate in WGS.
WGS
NGS
3.9 years ago by
Ruolin Liu
• 0
7
votes
14
replies
3.7k
views
How to count gene expression level in R?
expression
seurat
r
gene
bioconductor
3.9 years ago by
ja4123
▴ 30
0
votes
0
replies
533
views
Aligning multiple overlapping DNA sequence reads to predicted sequence not working
sequence-alignment
sequencing
3.9 years ago by
samuelhaysom
• 0
10
votes
5
replies
6.4k
views
which matrix should NMF use in single cell RNA seq data to find diferential gene program?
RNA-Seq
updated 3.9 years ago by
zdebruine
▴ 120 • written 5.3 years ago by
hq.huang11.6
▴ 10
2
votes
6
replies
2.2k
views
BioLabDonkey
BioLabDonkey
updated 3.7 years ago by
vytarasov
▴ 180 • written 4.1 years ago by
m.malosio
• 0
1
vote
3
replies
1.3k
views
Comparing ribo-minus and polyA-selected RNAseq data
library
type
RNAseq
updated 3.9 years ago by
dsull
★ 7.6k • written 3.9 years ago by
Josip
▴ 40
1
vote
2
replies
1.4k
views
VCFtools doesn't keep any variants using GATK output
gatk
vcftools
snps
updated 2.4 years ago by
Ram
45k • written 3.9 years ago by
fcarolinebe
▴ 40
0
votes
1
reply
1.4k
views
Tool:
BioFileConverter - an app for Mac users to convert .xdna and .dna files into genbank .gb files and more
dna
genbank
xdna
updated 2.3 years ago by
Ram
45k • written 3.9 years ago by
vytarasov
▴ 180
4
votes
12
replies
4.6k
views
6 follow
snpeff : wont recognize the gtf or gff3 files (runtime exception)
GTF
GFF3
snpeff
updated 2.1 years ago by
bestone
▴ 30 • written 3.9 years ago by
VenGeno
▴ 100
1
vote
2
replies
1.1k
views
Replacing default numbers with geneNames in enhancedVolcano
EnhancedVolcano
updated 16 months ago by
Ram
45k • written 3.9 years ago by
Mohan
• 0
0
votes
4
replies
2.8k
views
Can I use the summits.bed from MACS2 on HOMER
Homer
Macs
callpeak
bed
updated 3.9 years ago by
Friederike
9.0k • written 3.9 years ago by
damika
• 0
3
votes
0
replies
868
views
Herald:
The Biostar Herald for Friday, September 03, 2021
herald
3.9 years ago by
Biostar
3.6k
1
vote
4
replies
3.7k
views
Anova for proteomics
proteomics
anova
3.9 years ago by
FF
• 0
0
votes
0
replies
536
views
Criteria to select best model in 3Drefine
refine
model
Protein
refinement
3D
3.9 years ago by
Maham
• 0
1
vote
2
replies
1.2k
views
Tool to predict protein binding to DNA (what exact nitrogenous bases)
DNA
Protein
Binding
3.9 years ago by
Rafael Soler
★ 1.3k
1
vote
6
replies
2.7k
views
Methylkit (differential methylation analysis) error in data frame
methylation
differential
analysis
R
methylkit
3.9 years ago by
harshraje19
▴ 50
1
vote
4
replies
1.6k
views
Case Control count per variant
WGS
VCF
Annotation
NGS
3.9 years ago by
williamsbrian5064
▴ 540
1
vote
0
replies
944
views
Job:
BIOINFORMATICS PROGRAMMER
PROGRAMMER
updated 2.5 years ago by
Ram
45k • written 3.9 years ago by
ads
▴ 10
2
votes
3
replies
1.3k
views
Comparing two conditions within multiple different groups with unequal sizes in DESeq
RNAseq
DESeq2
transcriptomics
updated 3.9 years ago by
Papyrus
★ 3.1k • written 3.9 years ago by
heather.jackson17
• 0
1
vote
6
replies
1.6k
views
Hisat2 error
Hisat2
3.9 years ago by
sherafzalk769
▴ 10
2
votes
2
replies
1.3k
views
How to extract unique fastq seq. from BAM, irrespective of FLAG value ?
fastq
BAM
updated 3.9 years ago by
swbarnes2
15k • written 3.9 years ago by
ved_vyas
▴ 40
5
votes
1
reply
2.9k
views
Diffbind adding my own consensus peaks
dba.peakset
ATAC-Seq
Diffbind
ChIP-Seq
updated 3.9 years ago by
Rory Stark
★ 2.1k • written 3.9 years ago by
lara.bedeyan
▴ 30
1
vote
2
replies
2.8k
views
Module preservation analysis using WGCNA
cancer
expression
WGCNA
samples
gene
updated 3.9 years ago by
andres.firrincieli
3.9k • written 3.9 years ago by
seta
★ 1.9k
0
votes
0
replies
1.1k
views
Can cnetplot plot points change shape in clusterprofiler?
analysis
enrichment
R
dose
clusterprofiler
gene
3.9 years ago by
DN99
▴ 20
1
vote
1
reply
1.1k
views
GWAS results: base pair annotation
GWAS
Annotation
results
3.9 years ago by
hemasekhar09
• 0
3
votes
2
replies
1.0k
views
Batch Correction While Batch Numbers and Labels Match
batch
label
combat
updated 3.9 years ago by
ATpoint
88k • written 3.9 years ago by
ghiasirad.milad
▴ 10
4
votes
3
replies
2.0k
views
Tool:
brename: safely batch renaming files/directories via regular expression
batch
renaming
updated 3.9 years ago by
Ram
45k • written 3.9 years ago by
shenwei356
8.7k
1
vote
3
replies
1.8k
views
TMM normalization and sex effect
edgeR
diffbind
rnaseq
tmm
updated 3.9 years ago by
Rory Stark
★ 2.1k • written 3.9 years ago by
francesca3
▴ 160
0
votes
0
replies
928
views
Sambamba markdup usage help
markdup
sambamba
updated 3.9 years ago by
Ram
45k • written 3.9 years ago by
jonas.andersson
▴ 40
0
votes
0
replies
658
views
Download intergenic spacers between specific genes for all findings in genbank
seqinr
R
genbank
search
phylogeny
3.9 years ago by
poecile.pal
▴ 50
1
vote
2
replies
1.3k
views
featureCounts for WGS instead of RNA-seq
featureCounts
updated 3.9 years ago by
ATpoint
88k • written 3.9 years ago by
BioDH
▴ 10
0
votes
1
reply
2.0k
views
TCGAbiolinks: which normalization before differential expression analysis (legacy=TRUE vs. legacy=FALSE)
TCGAbiolinks
limma
TCGA
RNA-seq
normalization
updated 3.9 years ago by
fracarb8
★ 1.7k • written 3.9 years ago by
erica.fary
▴ 20
1
vote
1
reply
876
views
Missense Variant on hg19
SNP
plink
hg19
updated 3.5 years ago by
zx8754
12k • written 3.9 years ago by
martin.gallix
▴ 20
5
votes
9
replies
4.0k
views
Nanopore: Should you remove reads below certain length ?
QC
Nanopore
3.8 years ago by
chrys
▴ 80
5
votes
6
replies
2.2k
views
how to replace a list of headers in fasta file that are not in order
fasta
reheader
updated 3.9 years ago by
GenoMax
152k • written 3.9 years ago by
mthm
▴ 80
0
votes
2
replies
878
views
Weird 8bp peak in (clean) small RNA data
NGS
small-RNA
updated 3.9 years ago by
Dunois
★ 2.9k • written 3.9 years ago by
umberto.palatini01
• 0
10
votes
7
replies
2.2k
views
command for common between three files
grep
updated 3.9 years ago by
cpad0112
21k • written 3.9 years ago by
harry
▴ 40
0
votes
3
replies
2.7k
views
bcl2fastq ERROR
bcl2fastq
3.9 years ago by
GiV17
▴ 50
1
vote
7
replies
3.6k
views
How to map old Ensembl Gene IDs to HGNC symbols and Entrez IDs
mapping
Ensembl
updated 3.9 years ago by
Jean-Karim Heriche
27k • written 3.9 years ago by
confused but trying
• 0
0
votes
0
replies
560
views
Biovia discovery studio failed to download
discovery-studio
updated 3.9 years ago by
Ram
45k • written 3.9 years ago by
Matthew Aaron
• 0
0
votes
0
replies
1.0k
views
IPD values from ipdsummary, methylation analysis using PacBio
methylation
DNAsequencing
IPD
m4C
m6A
3.9 years ago by
Buffo
★ 2.4k
121,621 results • Page
576 of 2433
Recent Votes
Comment: Feedback needed on new user-friendly BED file tool
C: BRIG: How to use a multi fasta file as query
[Deprecated] Fast download of FASTQ files from the European Nucleotide Archive (ENA)
RNA-seq low quality sample in downstream analysis
RNA-seq low quality sample in downstream analysis
Comment: RNA-seq low quality sample in downstream analysis
Comment: RNA-seq low quality sample in downstream analysis
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Comment: Feedback needed on new user-friendly BED file tool
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What is the length of fasta reference sequences?
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> but it seems that i cannot directly use these BAM files in STAR. You most definitely can.
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You cannot use STAR to get isoform level counts, only gene level counts and you can do that using an input BAM. For transcript level counts…
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Why do you need to augment 16S rRNA sequences, given that tens of millions are already available? If your main reason is sequence diversity…
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Another example![enter image description here][1] [1]: /media/images/9fea51dc-fd45-4fe6-b018-f3399786
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