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Did you get this figured out? I am having the same error in R.
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Try this:
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> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
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Thank you Pierre!
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I have uploaded the ExomeCNV (v1.4) user manual [here][1].
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> could you please explain what the collate does?
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Thank you for the feedback! I already used just the `samtools fastq -1 R1.fq.gz -2 R2.fq.gz -s Rx.fq.gz -0 R0.fq.gz`. Could you please exp…
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faster use samtools collate+ fastq
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