Limit : all time
all time today this week this month this year
1,000 results • Page 4 of 20
Sort: Rank
Rank Views Votes Replies
6
votes
7
replies
1.1k
views
Forum: Generic avatars, not gravatars?
technical avatar
2.1 years ago by Michael 54k
5
votes
0
replies
2.9k
views
Forum: Correct method of Merging/Integrating multiple single cell dataset using Seurat
seurat scrnaseq
2.2 years ago by rohitsatyam102 ▴ 870
0
votes
0
replies
548
views
Forum: Phylogenomics in the presence of gene flow
hybridisation introgression gene-flow Phylogenomics
2.2 years ago by jeronimocid93 • 0
2
votes
2
replies
1.0k
views
Forum: Bioinformatician Jobs: Remote Flexible is possible?
remote-jobs bioinformatician
updated 23 months ago by 44k • written 2.2 years ago by ▴ 20
15
votes
11
replies
4.8k
views
9 follow
Forum: Methodological problems are extremely common for enrichment analysis - beware the pitfalls before you publish
GSEA DAVID enrichment-analysis -geneontology
updated 12 months ago by 44k • written 2.2 years ago by ★ 1.9k
0
votes
0
replies
485
views
Forum: CIRCexplorer2 - Getting Count Matrix
CIRCexplorer2 counts circRNA
2.2 years ago by akamonto • 0
3
votes
5
replies
1.1k
views
Forum: 1000 genomes data?
DNA 1000genomes variation
updated 2.2 years ago by 44k • written 2.2 years ago by ▴ 520
0
votes
0
replies
533
views
Forum: What kind of analysis automation or pipeline is most needed in genomic data analysis right now?
dna genome analysis programming statistics
updated 2.2 years ago by 82k • written 2.2 years ago by • 0
29
votes
10
replies
6.5k
views
10 follow
Forum: Interesting/useful/beautiful bio sequence viz tools
viz python visualisation
updated 14 months ago by 44k • written 6.2 years ago by 21k
3
votes
6
replies
2.2k
views
Forum: A Css For Small Screen Devices?
meta
updated 15 months ago by 44k • written 12.1 years ago by ★ 3.6k
12
votes
6
replies
3.0k
views
Forum: M.S. Bioinformatics and Computational Biology: Will I be able to find a job after graduation? I'm worried...
career Masters Graduation
updated 23 months ago by 44k • written 2.2 years ago by ▴ 20
0
votes
3
replies
939
views
Forum: Project Topics on bioinformatic
Data-analysis Coding Molecular-biology
updated 12 months ago by 44k • written 2.2 years ago by • 0
0
votes
4
replies
1.3k
views
Forum: Declining multithreading Diamond performance on decent dual AMD Epyc 7643 server
diamond performance EPYC 7643 multithreading AMD poor
updated 2.2 years ago by 142k • written 2.2 years ago by ▴ 10
3
votes
1
reply
942
views
Forum: How to download multiple .gz files from Ensembl Protists database
wget protist ensembl
updated 3 months ago by ★ 1.7k • written 2.2 years ago by ▴ 870
3
votes
4
replies
2.6k
views
Forum: Bioinformatics Research Topics/Areas that Everyone should take a look / Current Trends
research-area postgraduates
updated 15 months ago by 44k • written 2.3 years ago by ▴ 10
1
vote
0
replies
563
views
Forum: Continue exploring Bioinformatics and improving Bioinformatics Skills
postgraduate bioinformatics-skills
updated 15 months ago by 44k • written 2.3 years ago by ▴ 10
0
votes
1
reply
783
views
Forum: ensemble VEP server is down
VEP ensemble
updated 2.3 years ago by 82k • written 2.3 years ago by • 0
15
votes
10
replies
2.0k
views
7 follow
Forum: Tips and tricks to improve data visualization in bioinformatics
visualization ggplot2 plot
updated 2.3 years ago by ★ 27k • written 2.3 years ago by ★ 2.9k
3
votes
8
replies
1.6k
views
Forum: What are the pain points of using Genomics on the cloud today?
datasharing pipelines workspaces cloud genomics
updated 2.3 years ago by 22k • written 2.3 years ago by ▴ 520
0
votes
0
replies
564
views
Forum: UniProt survey about programmatic access
documentation api survey uniprot
updated 2.3 years ago by 162k • written 2.3 years ago by ★ 2.4k
4
votes
9
replies
3.1k
views
Forum: 100% variance explained on one PC in DESeq2 PCA?
RNA-Seq DESeq2
2.3 years ago by melatoninixo ▴ 10
17
votes
14
replies
3.4k
views
Forum: Asking for feedback on a Python library for computing alignments
alignment Python
updated 11 months ago by ▴ 220 • written 2.4 years ago by ▴ 60
0
votes
1
reply
652
views
Forum: Statistical methods Books Recommendation
Books Recommendation
updated 2.3 years ago by 82k • written 2.3 years ago by ▴ 110
0
votes
0
replies
481
views
Forum: Is there any limitation for number of samples in AUC analysis ?
curves ROC
2.3 years ago by sabaghianamir70 ▴ 70
6
votes
5
replies
4.0k
views
6 follow
Forum: How is the job outlook in 2020 ?
career outlook
updated 23 months ago by 44k • written 5.9 years ago by • 0
6
votes
5
replies
1.2k
views
6 follow
Forum: Usability of depiction of individual reads in genome browser visualization
visualization browser genome
updated 2.4 years ago by 100k • written 2.4 years ago by ▴ 600
4
votes
7
replies
1.8k
views
Forum: Data Base management system for data lake: Cassandra vs MongoDB vs Apache HBase
HBase Cassandra MongoDB Data-Lake
updated 2.4 years ago by ★ 3.2k • written 2.4 years ago by ▴ 120
9
votes
8
replies
5.2k
views
9 follow
Forum: insert figure and code in the post of Biostars?
meta biostars
updated 14 months ago by 44k • written 9.0 years ago by ★ 2.2k
7
votes
2
replies
1.6k
views
Forum: What are the most influential Bioinformatics/Computational Biology papers/methods/discoveries of 2021?
snp papers survey
updated 15 months ago by 44k • written 2.4 years ago by ★ 1.4k
0
votes
1
reply
784
views
Forum: What are the most important papers/methods in Genomics/Bioinformatics of 2021?
publications
updated 11 months ago by 44k • written 2.4 years ago by ★ 2.5k
24
votes
11
replies
4.3k
views
7 follow
Forum: In 2022 is Perl and Ruby programming languages still useful for bioinformatics?
ruby perl
updated 2.4 years ago by 8.6k • written 2.4 years ago by • 0
0
votes
4
replies
877
views
Forum: Terms (like atlas, map, and archive) on database description
database
2.4 years ago by bioinformaticsBoy ▴ 10
2
votes
2
replies
812
views
Forum: How much are companies willing to pay for microbiome data?
NGS metagenomics microbiome
2.4 years ago by maa4618 • 0
19
votes
1
reply
4.5k
views
Forum: Best programming language for bioinformatics - R Language
programming R
updated 14 months ago by 82k • written 3.3 years ago by ▴ 420
6
votes
7
replies
1.4k
views
Forum: How to change my email address
meta biostars
updated 2.5 years ago by • 0 • written 3.2 years ago by ▴ 50
9
votes
11
replies
3.4k
views
6 follow
Forum: 2021: state and usage of compressed file standards better than BAM and FASTQ
bam compression fastq
updated 22 months ago by ▴ 120 • written 3.1 years ago by ★ 5.3k
10
votes
3
replies
4.8k
views
Forum: Trimming tools - your experience please?
trimming
updated 2.5 years ago by 19k • written 2.5 years ago by ▴ 20
8
votes
9
replies
1.8k
views
Forum: Most useful public genomic/genetic databases/tools/applications
public-data genomics Genetics open-access
updated 15 months ago by 44k • written 2.5 years ago by ▴ 520
74
votes
14
replies
30k
views
12 follow
Forum: Bioinformatics Consulting Thoughts
consulting
updated 23 months ago by 44k • written 14.0 years ago by 4.5k
6
votes
3
replies
1.2k
views
Forum: Computational Biology Conference
biology computational science research conference
updated 2.5 years ago by 47k • written 2.5 years ago by ▴ 790
0
votes
1
reply
746
views
Forum: UK supercomputer Cambridge-1 vs SDSC vs TACC
SDSC TACC HPC Cambridge-1
updated 2.5 years ago by 142k • written 2.5 years ago by ★ 9.4k
0
votes
1
reply
733
views
Forum: Official/centralized/designated genetic/biological knowledge graph?
knowledge graph
updated 2.5 years ago by 8.7k • written 2.5 years ago by • 0
0
votes
0
replies
548
views
Forum: Targeted sequencing and phylogenetics
SC sequencing exome gene_panel
updated 15 months ago by 44k • written 2.5 years ago by • 0
2
votes
7
replies
3.1k
views
Forum: M1 Pro/Max and future
Max M1 M2 Pro Mac
updated 2.5 years ago by 142k • written 2.6 years ago by ▴ 20
21
votes
8
replies
7.6k
views
Forum: Is there ever a good reason to use a log transformation instead of Box-Cox?
data skew transformation power
updated 2.6 years ago by 100k • written 2.6 years ago by ★ 27k
6
votes
2
replies
802
views
Forum: Biology undergraduate looking for mentor
computational-biology Biology mentor Toronto
updated 2.6 years ago by 44k • written 2.6 years ago by • 0
1
vote
7
replies
1.4k
views
Forum: Does it matter where I get my PhD? I am currently a masters student.
advice PhD Masters
2.6 years ago by nickroseae ▴ 10
16
votes
7
replies
2.0k
views
Forum: Will a user #100000 get Tesla Model 3?
milestone
updated 2.6 years ago by 100k • written 2.6 years ago by ★ 27k
2
votes
8
replies
1.9k
views
Forum: Non biology & computer professional interested in bioinformatics
computer-science machine-learning
updated 15 months ago by 44k • written 2.6 years ago by • 0
0
votes
0
replies
651
views
Forum: PhD Bioinformatics Remote positions
PhD
updated 23 months ago by 44k • written 2.6 years ago by ▴ 30
1,000 results • Page 4 of 20
Recent Votes
A: Fold change - a final explanation
Comment: scRNA-seq quality control
Comment: How to get the ratio of allele counts from GATK derived VCF file?
Setting up Aspera Connect (ascp) on Linux and macOS
Setting up Aspera Connect (ascp) on Linux and macOS
Answer: Genes' fpkm values through cufflink
Answer: Genes' fpkm values through cufflink
Recent Locations • All
Spain, 1 minute ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 1 minute ago
United States, 2 minutes ago
Hong Kong, 3 minutes ago
India, 4 minutes ago
Japan, 5 minutes ago
Italy, 6 minutes ago
Recent Awards • All
Scholar to LChart 3.9k
Scholar to ATpoint 82k
Popular Question to liyong ▴ 80
Popular Question to Shicheng Guo ★ 9.4k
Popular Question to reza ▴ 300
Popular Question to mhale ▴ 20
Teacher to Ashutosh Pandey 12k
Recent Replies
Comment: Z score by Akash D ▴ 40
Alright! Got you...
Comment: Ideal PC configurations and operating system for bioinformatics laboratory by i.sudbery 19k
It very much depends on whether the OP does want/need to do the CellRanger runs locally or not. Doesn't really matter if its only occasion…
Comment: log2 fold change in RNA-seq analysis by Mensur Dlakic ★ 27k
Everything is already explained on this page, just read everything already written above. Specifically, [**this comment**][1]. [1]: htt…
Answer: log2 fold change in RNA-seq analysis by May Ling • 0
Good day everyone, Sorry I found a bit confusing and would appreciate if I could clarify on the calculation. I am using DESeq. My desire…
Answer: GWAS Phenotypes by 韩雨 • 0
In my opinion, the basis of the question is to solve whether the phenotype is regulated by genetics. In the aspect of genetic, the estima…
Answer: Classic threshold for log2 fold change in RNA-seq experiment by May Ling • 0
Good day everyone, Sorry I found a bit confusing and would appreciate if I could clarify on the calculation. I am using DESeq. My desire…
Comment: some error in building kraken2 database by ahmet • 0
Were you able to fix this issue? I'm also trying to add external species to krakendb
Comment: Z score by ATpoint 82k
logFCs are a bit difficult to cluster I think, because fold changes without stats attached to it are meaningless. They can be very big, due…
Comment: Z score by Akash D ▴ 40
Ok. However, if i perform it on log2FC, there wont be any control samples visible in my heatmap. Your answer is perfect.
Comment: Z score by ATpoint 82k
You can apply Z-scores on whatever you want, but it must make sense and depends on what you want to do. What is the context? See for exampl…
Answer: Z score in RNAseq by Akash D ▴ 40
Can Z score be applied on log2FC and then visualized? Alternatively, Can log2FC be converted to Z scores and then visualized as heatmap?
Comment: Ideal PC configurations and operating system for bioinformatics laboratory by ATpoint 82k
Just for comparison, I deal with scRNA-seq daily and my workstation is a 12700k i7 with 128GB RAM and even this is actually more than I nee…
Answer: Ideal PC configurations and operating system for bioinformatics laboratory by colindaven 6.4k
- As others have said, 1-2 workstations are probably the way to go. - A Linux OS like Ubuntu is probably easiest and has best docs - RA…
Comment: How to get the ratio of allele counts from GATK derived VCF file? by anikcropscience ▴ 230
Ok, thank you for the reply. I will check out the DP field then.
Comment: Alternatives To Liftover by Thanujay S • 0
Hey! Would you consider building an API for the same? Is that something you have planned?
Traffic: 2675 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6