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460 results • Page 3 of 10
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25
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7
replies
1.9k
views
6 follow
Forum: What Are The Best Bioinformatics Course Materials [2020]
course teaching
updated 11 months ago by 43k • written 3.4 years ago by 8.7k
0
votes
2
replies
786
views
Forum: A new data analytics platform for next gen sequencing
next-gen-sequencing RNA-Seq
updated 10 weeks ago by 43k • written 3.4 years ago by • 0
7
votes
1
reply
7.2k
views
Forum: What are chromatin states ?
genome ChIP-Seq
12 weeks ago by rohitsatyam102 ▴ 850
3
votes
7
replies
2.8k
views
Forum: Strategies for group submisions to SRA (BioProject)
NCBI SRA next-gen Archive Core-Facility
updated 11 months ago by 43k • written 5.5 years ago by ★ 2.7k
2
votes
6
replies
3.1k
views
Forum: RIP CentOS, CentOS 8 to be EOL'd in 2021
centos linux-distro os
updated 10 months ago by 43k • written 3.4 years ago by 11k
0
votes
0
replies
918
views
Forum: MAGs annotation tools
annotation genome
updated 10 months ago by 43k • written 4.2 years ago by ▴ 50
4
votes
5
replies
1.3k
views
Forum: Is Bioinformatics enough? Is it taken seriously?
career
updated 10 months ago by 43k • written 3.4 years ago by • 0
1
vote
2
replies
843
views
Forum: bioinformatics career choice - could use guidance
career
updated 10 months ago by 43k • written 3.5 years ago by • 0
19
votes
7
replies
1.2k
views
9 follow
Forum: DNA in pixels
genome alignment sequencing
updated 10 months ago by 43k • written 3.4 years ago by ▴ 30
0
votes
1
reply
581
views
Forum: What are the best online tutoring sites for biology help?
Biology
updated 10 months ago by 43k • written 3.5 years ago by • 0
4
votes
1
reply
726
views
Forum: Help with Bioinformatics Course
cancer
updated 10 months ago by 43k • written 3.6 years ago by • 0
0
votes
1
reply
685
views
Forum: MSPH (Medical Microbiology) student with interest in Bioinformatics
medical-microbiology microbiology
updated 11 months ago by 43k • written 3.6 years ago by • 0
0
votes
0
replies
705
views
Forum: Interview: Identifying the allelic expression of INDEL mutations
SNP RNA-Seq alignment
updated 10 months ago by 43k • written 3.6 years ago by • 0
73
votes
14
replies
4.3k
views
12 follow
Forum: Things you wish you knew when entering the bioinformatics field
pitfalls advice
updated 10 months ago by 43k • written 3.6 years ago by ★ 16k
0
votes
4
replies
989
views
Forum: Genes inhibiting each other's expression
Gene-expression
updated 10 months ago by 43k • written 3.6 years ago by ▴ 60
9
votes
6
replies
1.5k
views
Forum: How to start my career in Bioinformatics
career
updated 10 months ago by 43k • written 3.7 years ago by ▴ 10
1
vote
0
replies
710
views
Forum: Open Project in Bioinformatics
genome
updated 10 months ago by 43k • written 3.6 years ago by ▴ 10
16
votes
6
replies
8.1k
views
7 follow
Forum: What computer skills should I put on my resume?
resume genome
updated 11 months ago by 43k • written 6.4 years ago by ▴ 30
0
votes
2
replies
1.2k
views
Forum: Welcome to join our Wechat group for Bioinformatics!
single-cell ChIP-Seq genome algorithm RNA-Seq
updated 10 months ago by 43k • written 3.7 years ago by ▴ 160
12
votes
2
replies
2.9k
views
Forum: List of genome annotation tools (>140)
gene genome
updated 11 months ago by 43k • written 4.7 years ago by 8.5k
13
votes
7
replies
1.3k
views
Forum: Feedback for my python package to combine results from multiple classifiers
annotation protein python machine-learning
updated 10 months ago by 43k • written 3.7 years ago by ▴ 110
38
votes
17
replies
3.2k
views
7 follow
Forum: Why does bioinformatics use a special format like a BAM file instead of a database like SQLite?
sam bam samtools
updated 10 months ago by 43k • written 3.7 years ago by ▴ 250
60
votes
25
replies
5.5k
views
8 follow
Forum: Am I crazy, or are most published RNA-seq studies vastly underpowered?
sample-size statistical-power RNA-Seq
updated 10 months ago by 43k • written 3.7 years ago by ▴ 230
1
vote
1
reply
592
views
Forum: Bioinfo and Microbio
snp gene genome next-gen
updated 10 months ago by 43k • written 3.7 years ago by • 0
23
votes
11
replies
2.0k
views
9 follow
Forum: file and directory management best practices
file-management
updated 10 months ago by 43k • written 3.7 years ago by ▴ 140
1
vote
4
replies
1.8k
views
Forum: What do you want to learn about bioinformatics?
course education
updated 11 months ago by 43k • written 5.3 years ago by ▴ 120
2
votes
8
replies
1.7k
views
7 follow
Forum: Which tools do you miss?
software
updated 10 months ago by 43k • written 3.7 years ago by ▴ 110
3
votes
2
replies
1.2k
views
Forum: Preferred cloud environment for genomics.
next-gen-sequencing RNA-Seq alignment
updated 10 months ago by 43k • written 3.8 years ago by ▴ 10
1
vote
13
replies
2.8k
views
Forum: Bioinformatics computer upgrade help
computer
updated 10 months ago by 43k • written 3.8 years ago by ▴ 50
6
votes
5
replies
1.0k
views
Forum: Russian universities for the study of biomedicine
russian-university
updated 10 months ago by 43k • written 3.8 years ago by ▴ 30
22
votes
15
replies
8.9k
views
11 follow
Forum: RNASeq user experience with Novogene?
RNA-Seq
updated 11 months ago by 43k • written 5.8 years ago by ▴ 80
2
votes
9
replies
1.4k
views
Forum: 'No code' data manipulation tools for bioinformatics
software
updated 10 months ago by 43k • written 3.8 years ago by • 0
1
vote
2
replies
1.1k
views
Forum: Metagenomics Tutoring Opportunity
metagenomics microbial tutoring
updated 11 months ago by 43k • written 5.4 years ago by ▴ 30
23
votes
12
replies
1.9k
views
6 follow
Forum: Whole-Exome Analysis on a Mainstream Desktop PC
NGS whole-exome
updated 10 months ago by 43k • written 3.9 years ago by 11k
2
votes
9
replies
1.3k
views
Forum: Any good idea for bioinfo final presentation?
R
updated 10 months ago by 43k • written 3.9 years ago by • 0
5
votes
4
replies
1.2k
views
Forum: Consider CodeOcean or other solutions for runnable Biostars answers?
CodeOcean how-to meta
updated 10 months ago by 43k • written 3.9 years ago by 22k
0
votes
5
replies
1.1k
views
Forum: Advice for a start in Bioinformatics
R next-gen Python
updated 10 months ago by 43k • written 3.9 years ago by • 0
23
votes
18
replies
1.5k
views
Forum: Versioning of Blast DB and Reproducible Research
database blast reproducible-research
updated 10 months ago by 43k • written 3.9 years ago by ▴ 60
0
votes
0
replies
1.1k
views
Forum: ssDNA Aptamer structure prediction
aptamer selex
updated 10 months ago by 43k • written 4.0 years ago by • 0
0
votes
0
replies
784
views
Forum: Where can I find a one-year fellowship in bioinformatics?
Bioinformatics-Minor Postodoctoral-Fellowship
updated 10 months ago by 43k • written 4.0 years ago by • 0
22
votes
8
replies
1.9k
views
10 follow
Forum: Is there any online course for bioinformatics right now or in the next two or three months?
online-course mooc
updated 10 months ago by 43k • written 4.0 years ago by ▴ 50
21
votes
18
replies
1.7k
views
Forum: Is it safe to keep our data in github
github
updated 10 months ago by 43k • written 4.0 years ago by ▴ 70
3
votes
6
replies
2.1k
views
Forum: Choosing the appropriate test for differential analysis: Limma or Mann-Whitney (with BH correction)? Test for normality
R Shapiro-Wilk Limma Mann-Whitney
updated 10 months ago by 43k • written 4.0 years ago by ▴ 40
1
vote
7
replies
1.6k
views
Forum: Best online certificates / masters for Bioinformatics
learning certification courses online-training
updated 10 months ago by 43k • written 4.0 years ago by • 0
34
votes
22
replies
2.9k
views
11 follow
Forum: Have we failed as bioinformatician in this time of COVID-19
Bioinformatician COVID-19
updated 10 months ago by 43k • written 4.0 years ago by ▴ 10
0
votes
2
replies
1.4k
views
Forum: Alternative of Ingenuity Pathway Analysis - QIAGEN to filter Biomarkers
RNA-Seq
updated 10 months ago by 43k • written 4.0 years ago by • 0
7
votes
8
replies
2.4k
views
Forum: Virus Genome Length and GC Content of SARS-COV-2 causing COVID-19
sequence genome
updated 10 months ago by 43k • written 4.1 years ago by ▴ 30
1
vote
0
replies
586
views
Forum: New to bioinformatics
R Python
updated 10 months ago by 43k • written 4.0 years ago by ▴ 10
30
votes
16
replies
2.2k
views
9 follow
Forum: Which programming langauge shall I start as a beginner in Bioinformatics
programming-language single-cell
updated 10 months ago by 43k • written 4.0 years ago by • 0
0
votes
1
reply
2.2k
views
Forum: How's the bioinformatics engineering path? How to become a bioinformatics engineer?
machine-learning Bioinformatics-engineer
updated 10 months ago by 43k • written 4.0 years ago by ▴ 60
460 results • Page 3 of 10
Recent Votes
Answer: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Answer: How to use limma to find differentially expressed genes in response to a continu
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Recent Replies
Comment: PDB related issue by Mensur Dlakic ★ 27k
The best way to find out is to read the original paper. My guess is that the residue has been crystallized in alternative conformations, wh…
Answer: NGS forensics: how to know if data is fabricated by Mensur Dlakic ★ 27k
I share the opinion by @philippbayer I have seen enough questionable things in life and in science to keep me permanently jaded, but there…
Comment: How many reads for WGS Sequencing? by Mensur Dlakic ★ 27k
I downloaded the data in two files from the link you provided. With this command: megahit -1 ERR072246_1.fastq.gz -2 ERR072246_2.fastq…
Comment: How many reads for WGS Sequencing? by Mensur Dlakic ★ 27k
If you have Linux the assembly should work on your system, but 8 GB is generally not enough for assembling larger genomes.
Comment: How many reads for WGS Sequencing? by Mensur Dlakic ★ 27k
I think you might be getting stuck on less relevant parts of my exercise. The most important point was that nothing is wrong with the data.…
Comment: What does it mean single base resolution in sequencing? by dsull ★ 5.9k
Great comprehensive explanation and overview of the technologies -- with regards to sequencing assays, the one thing I'd add is SNV identif…
Answer: What does it mean single base resolution in sequencing? by dsull ★ 5.9k
I think that term means slightly different things in different contexts. For example, it's useful to profile mRNA modifications (e.g. m6a) …
Comment: Cannot process all the reads in a fast5 file? by chujie • 0
Hi, I met the same problem, have you found the solution?
Answer: What does it mean single base resolution in sequencing? by LauferVA 4.2k
Hi @fe3e6f65 , In a single sentence, the answer to your question can be summarized as, "*the resolution of a genomic technology refers to …
Comment: PCA plot by LauferVA 4.2k
Without more context, we cannot interpret this PCA plot. There are many possibilities. In addition, this question is basic enough that it w…
Comment: NGS forensics: how to know if data is fabricated by Jeremy Leipzig 22k
i have the name ready: out**liar**
Comment: What does it mean single base resolution in sequencing? by GenoMax 141k
Sequencing by hybridization (https://en.wikipedia.org/wiki/Sequencing_by_hybridization ) is likely not giving you single base resolution. B…
Comment: Fetch table from clinvar database according to a list of rsid by ashaneev07 ▴ 20
Hii... i have updated the script in python..But, still getting no data found. Actually the data is there, i have print the parsed html file…
Comment: How to assign cell types after integration in scRNA by ATpoint 82k
https://bioconductor.org/books/release/OSCA.multisample/using-corrected-values.html
Comment: Downloading full alignments from Pfam by GenoMax 141k
Not as convenient but the entire set of full alignments can be downloaded here: https://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pf…
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