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121,991 results • Page
627 of 2440
Sort: Rank
Rank
Views
Votes
Replies
3
votes
4
replies
1.4k
views
plink2 cannot identify options when looping the chromosomes
plink2
plink
4.3 years ago by
okiedokie1208
▴ 40
2
votes
10
replies
3.1k
views
How to search for genes 100Kb up and downstream of any genomic site
R
updated 4.3 years ago by
Alex Reynolds
36k • written 4.3 years ago by
MAPK2
▴ 50
1
vote
1
reply
759
views
How to extract genes from RNA-seq using its reference genome?
of
alignment
RNAseq
genes
list
updated 4.3 years ago by
GenoMax
154k • written 4.3 years ago by
ivan.nikolaev025
• 0
0
votes
0
replies
705
views
CHIPQC problem ( the wrong ReadL and no FragL RelCC)
CHIPQC
updated 4.3 years ago by
GenoMax
154k • written 4.3 years ago by
pengcheng
• 0
0
votes
3
replies
3.1k
views
WGCNA: scale-free topology fit indexes are negative
gene
r
WGCNA
updated 4.3 years ago by
andres.firrincieli
3.9k • written 4.3 years ago by
Erica
▴ 10
6
votes
8
replies
2.9k
views
what are the reasons to find so few Differentially expressed genes (DEGs)?
Gene
RNA
updated 4.3 years ago by
swbarnes2
15k • written 4.3 years ago by
sunnykevin97
▴ 1000
0
votes
0
replies
712
views
extract exons/introns from multiple fasta files with gene sequences
intron
splicing
fasta
CDS
exon
4.3 years ago by
ramiroricardo
• 0
0
votes
1
reply
2.1k
views
Plink: --keep flag
--keep
subset
plink
updated 4.3 years ago by
chrchang523
11k • written 4.3 years ago by
Swetaleena
• 0
1
vote
3
replies
1.6k
views
Error when searching for matches using the PSSM score with proteins (.motif BioPython)
protein
motif
python
biopython
3.1 years ago by
Agenor Neto
▴ 10
2
votes
2
replies
1.1k
views
Detecting RNA Editing in Single-Cell RNA-seq
scRNAseq
RNAediting
4.3 years ago by
fouerghi20
▴ 90
3
votes
3
replies
1.5k
views
Intrinsically disordered region(IDR) or Intrinsically disordered Protein(IDP)
biopython
updated 4.3 years ago by
i.sudbery
22k • written 4.3 years ago by
dachi
• 0
0
votes
3
replies
3.4k
views
STARsolo --EmptyDrops_CR parameters
RNA-seq
alignment
STAR
updated 3.7 years ago by
Jianxuan
• 0 • written 4.3 years ago by
PianoEntropy
▴ 70
3
votes
3
replies
3.7k
views
Nanopore tutorial for beginners
nanopore
updated 2.6 years ago by
Ram
45k • written 4.3 years ago by
Lila M
★ 1.3k
0
votes
0
replies
588
views
Mitochondrial targeting sequence
mts
crispr
geneediting
gene
Sequence
4.3 years ago by
chiti.agarwal
▴ 10
3
votes
2
replies
3.4k
views
tools for identifying mitochondrial-targeting sequence in different proteins
alignment
sequencing
mtp
updated 3.0 years ago by
Ram
45k • written 10.2 years ago by
elmira b
▴ 50
9
votes
6
replies
10k
views
6 follow
Quadruplex sequence batch prediction
Quadruplex
updated 2.7 years ago by
Ram
45k • written 10.4 years ago by
Qi Zhao
▴ 50
0
votes
0
replies
618
views
Read distribution tool accounting for read orientation
RNA
4.3 years ago by
VHahaut
★ 1.2k
2
votes
1
reply
1.0k
views
Different ab initio 3D structure prediction for same protein sequence by trRosetta
3D
protein
trRosetta
structure
prediction
updated 4.3 years ago by
jgreener
▴ 390 • written 4.3 years ago by
saamar.rajput
▴ 80
0
votes
3
replies
1.4k
views
Local realignment around indels
local
realignment
4.3 years ago by
Elisa
• 0
1
vote
5
replies
3.1k
views
How to create a proper design matrix/contrast matrix for methylation 850k analysis in limma?
850k
methylation analysis
R
limma
design matrix
updated 4.3 years ago by
almsu798
• 0 • written 5.7 years ago by
mario.red8976
▴ 140
2
votes
5
replies
4.6k
views
Snakemake error: "Removing output files of failed job since they might be corrupted:"
Snakemake
updated 4.3 years ago by
dariober
15k • written 4.3 years ago by
kamanovae
▴ 100
2
votes
5
replies
5.4k
views
Beagle: Skip intervals with no common markers
beagle
plink
vcf
conformgt
updated 4.3 years ago by
Jack
▴ 20 • written 5.6 years ago by
NS
▴ 10
1
vote
0
replies
691
views
Duplicate genotypes after phasing in Beagle
Beagle
Phasing
4.3 years ago by
PKW
▴ 110
1
vote
0
replies
1.2k
views
Deeptools plotPCA on RNA-seq help
PCA
deeptools
RNAseq
4.3 years ago by
jrichardalbert
▴ 10
1
vote
2
replies
1.2k
views
How to perform differential expression on proteomics data?
proteomics
TMT
Differential-Expression
R
4.3 years ago by
lenC_biotecLover
▴ 90
2
votes
6
replies
3.5k
views
How to find overlapping coordinates of a gtf file
gtf-file
sequencing
genome
annotation
RNA-Seq
updated 4.3 years ago by
Alex Reynolds
36k • written 4.3 years ago by
Apex92
▴ 320
0
votes
4
replies
1.6k
views
how to merge two files in two columns using bash command lines
assembly
fasta
trinity
updated 4.3 years ago by
husensofteng
▴ 410 • written 4.3 years ago by
FadyNabil
▴ 20
0
votes
0
replies
702
views
Series Matrix File in GEO
GEO
labeling
GEO2R
4.3 years ago by
Sonia
• 0
2
votes
2
replies
1.1k
views
merging fasta sequences into a single fasta sequence in large file
fasta
sequences
updated 4.3 years ago by
Michael
56k • written 4.3 years ago by
K
▴ 10
0
votes
0
replies
1.1k
views
Request for feature addition to p3_in.pl to extract specified length of flanking sequence around a SSR form MISA output file (genome.misa)
Primer3
ssr
MISA
Flanking
Sequence
updated 3.8 years ago by
Princy
▴ 60 • written 4.3 years ago by
Aneesha
• 0
6
votes
6
replies
1.7k
views
Divide by a specified member in a group in R
R
dplyr
updated 4.3 years ago by
Dunois
★ 2.9k • written 4.3 years ago by
mbk0asis
▴ 700
4
votes
12
replies
2.7k
views
RNAseq analysis for aspergillus niger ?
aspergillus
niger
RNAseq
4.3 years ago by
najibveto
▴ 130
0
votes
0
replies
587
views
Mutation rate of repeat elements
transposable
mutation
rate
evolution
elements
repeat
4.3 years ago by
kanamori.shunsuke
• 0
0
votes
6
replies
2.2k
views
Creating Annotation GTF/GFF file
HG38
Annotation
Rna-Seq
Genome
updated 4.3 years ago by
Zhilong Jia
★ 2.2k • written 4.3 years ago by
santos48
▴ 40
0
votes
2
replies
1.8k
views
RepeatMasker sequence identifier error
RepeatMasker
updated 4.2 years ago by
Shri hari
▴ 40 • written 4.3 years ago by
sumin.jo
• 0
0
votes
5
replies
1.6k
views
Create BED- or GVCF-type file for human genome
GRCh37
FASTA
GVCF
VCF
hg19
updated 4.3 years ago by
Ram
45k • written 4.3 years ago by
ariel
▴ 250
1
vote
5
replies
2.6k
views
conform-gt error "Non-unique marker ID: ."
conform-gt
error
updated 4.2 years ago by
Jack
▴ 20 • written 4.3 years ago by
cg_ref_database
▴ 20
0
votes
0
replies
689
views
map miRNA to chromosomal locations
python
miRNA
R
location
chromosome
4.3 years ago by
ehruan
▴ 10
1
vote
2
replies
1.1k
views
How to calculate the difference between the RNA-Seq individual samples?
comparison
expression
edgeR
replicates
R
4.3 years ago by
mohammedtoufiq91
▴ 270
0
votes
0
replies
847
views
Job:
Research assistants or postdoctoral fellows in computational biology/bioinformatics (UMass Medical School, Worcester, Massachusetts)
computational
sequencing
genetics
genomics
updated 4.3 years ago by
Ram
45k • written 4.3 years ago by
elimtt
▴ 10
1
vote
1
reply
756
views
any way to use RNA seq mapping to choose between competing gene models?
gene
rnaseq
prediction
updated 4.3 years ago by
GenoMax
154k • written 4.3 years ago by
sullis02
▴ 40
2
votes
4
replies
3.0k
views
Issue with bcftools csq phasing
phasing
genotyping
updated 4.3 years ago by
rabio
▴ 10 • written 7.0 years ago by
shubhra.bhattacharya
▴ 140
1
vote
2
replies
1.1k
views
fpkm values mismatch
rna
topmed
seq
fpkm
4.3 years ago by
ranjits
• 0
0
votes
2
replies
1.0k
views
Comparing two highly similar genomes
genome
alignment
updated 2.3 years ago by
Ram
45k • written 4.3 years ago by
seta
★ 1.9k
0
votes
0
replies
807
views
News:
Parallel bioinformatics using the GO programming language
golang
parallel
updated 4.3 years ago by
Ram
45k • written 4.3 years ago by
Shahid
• 0
0
votes
0
replies
602
views
How to analyse RNA-based protein pulldown mass spectrometry data
proteomics
R
maxquant
limma
4.3 years ago by
PK
▴ 130
3
votes
3
replies
2.4k
views
Bcftools isec output only contains one sample name - how to identify which samples share the same variants
bcftools
vcf
isec
updated 4.3 years ago by
Kevin Blighe
89k • written 4.3 years ago by
Linda
▴ 80
1
vote
1
reply
978
views
What tools are best for conjoined gene/readthough detection and how do they differ from fusion gene detection?
conjoined
fusion
gene
updated 4.3 years ago by
WouterDeCoster
48k • written 4.3 years ago by
Jeremy Leipzig
23k
2
votes
3
replies
1.4k
views
Retrieving the corresponding Haplotype CDS from Ensembl
gene
Ensembl
protein
Haplotype
updated 4.3 years ago by
Emily
24k • written 4.3 years ago by
Joseph Hughes
★ 3.0k
0
votes
0
replies
711
views
RNA-Seq featureCounts Results Annotation File
Nanopore
HG38
Rna-Seq
Genome
4.3 years ago by
santos48
▴ 40
121,991 results • Page
627 of 2440
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