updated 4 hours ago by
cmdcolin
★
3.4k
•
written 8.2 years ago by
stianlagstad
★
1.1k
77
votes
9
replies
12k
views
15 follow
16
votes
5
replies
12k
views
updated 6 hours ago by
Malachi Griffith
19k
•
written 13.2 years ago by
Abdel
▴
370
10
votes
6
replies
294
views
3 hours ago by
blackadder
▴
30
9
votes
8
replies
2.0k
views
updated 4 days ago by
century
•
0
•
written 5.8 years ago by
zhaohainancau
•
0
9
votes
7
replies
485
views
updated 9 hours ago by
Istvan Albert
99k
•
written 3 days ago by
sehriban.buyukkilic
•
0
9
votes
15
replies
784
views
9
votes
9
replies
625
views
7
votes
8
replies
11k
views
7 follow
updated 4 days ago by
SequenceServer
▴
80
•
written 11.5 years ago by
ranlib
▴
40
7
votes
11
replies
1.7k
views
updated 3 days ago by
cwwong13
▴
20
•
written 22 months ago by
Fatemeh Nabizadeh
▴
10
6
votes
3
replies
274
views
4 days ago by
blackadder
▴
30
6
votes
3
replies
226
views
5
votes
8
replies
450
views
10 hours ago by
sil_bioinfo
▴
30
5
votes
3
replies
277
views
updated 3 days ago by
Brian Bushnell
19k
•
written 3 days ago by
jiyoung
▴
20
5
votes
6
replies
394
views
updated 2 days ago by
NextGenSeek
•
0
•
written 3 days ago by
singhankit973
•
0
5
votes
1
reply
4.3k
views
4
votes
5
replies
1.9k
views
4
votes
8
replies
580
views
4 days ago by
davidmaimoun
▴
50
4
votes
5
replies
864
views
updated 1 day ago by
Pierre Lindenbaum
158k
•
written 14 months ago by
jcn
▴
30
4
votes
6
replies
369
views
4
votes
4
replies
264
views
4
votes
7
replies
276
views
4
votes
9
replies
583
views
updated 3 days ago by
rfran010
▴
880
•
written 9 days ago by
jakob.olsson04
•
0
4
votes
6
replies
555
views
6 days ago by
DonPhager
•
0
4
votes
2
replies
1.9k
views
updated 4 days ago by
colindaven
5.7k
•
written 2.4 years ago by
kamanovae
▴
100
4
votes
5
replies
1.7k
views
updated 5 days ago by
pippo1980
•
0
•
written 9 months ago by
spence.lank
▴
10
3
votes
4
replies
310
views
3
votes
2
replies
387
views
updated 1 day ago by
harold.smith.tarheel
★
4.9k
•
written 1 day ago by
Axzd
▴
50
3
votes
4
replies
374
views
3
votes
2
replies
200
views
3
votes
5
replies
508
views
3
votes
2
replies
275
views
3
votes
2
replies
640
views
3
votes
2
replies
151
views
30 minutes ago by
synat.keam
▴
80
3
votes
2
replies
197
views
3
votes
2
replies
958
views
3
votes
6
replies
412
views
3
votes
0
replies
159
views
2
votes
1
reply
185
views
2
votes
11
replies
664
views
1 day ago by
sil_bioinfo
▴
30
2
votes
1
reply
156
views
updated 4 days ago by
Pierre Lindenbaum
158k
•
written 4 days ago by
rejoeraymond776
▴
10
2
votes
4
replies
364
views
3 days ago by
singhankit973
•
0
2
votes
2
replies
670
views
2
votes
8
replies
667
views
6 follow
updated 1 day ago by
ATpoint
78k
•
written 19 days ago by
ellen.francis
▴
10
2
votes
9
replies
668
views
2
votes
3
replies
205
views
updated 1 day ago by
Philipp Bayer
8.1k
•
written 2 days ago by
hakhasan
•
0
2
votes
1
reply
241
views
updated 3 days ago by
Kevin Blighe
86k
•
written 5 days ago by
jabbari.parnian
▴
30
2
votes
4
replies
445
views
updated 3 days ago by
Elisabeth Gasteiger
★
2.3k
•
written 7 days ago by
Mery
•
0
2
votes
3
replies
301
views
updated 4 days ago by
ATpoint
78k
•
written 4 days ago by
r.shiasi3897
▴
10
2
votes
1
reply
160
views
2
votes
3
replies
196
views
Recent Votes
Recent Locations •
All
Chile, just now
Barcelona, Spain, 1 minute ago
United States, 6 minutes ago
United States, 13 minutes ago
UK, 16 minutes ago
United States, 17 minutes ago
United States, 18 minutes ago
Recent Awards •
All
Popular Question to
beausoleilmo
▴
560
Commentator to
Brian Bushnell
19k
Popular Question to
Gama313
▴
120
Popular Question to
nanodano
▴
30
Popular Question to
shome
▴
10
Popular Question to
Malachi Griffith
19k
Scholar to
jared.andrews07
★
16k
Recent Replies
Comment: Should I scale all genes in single cell Seurat?
by
synat.keam
▴
80
Thanks, António for your kind and detailed responses. You helped clear my doubt about scaling!
Kind Regards,
Synat
Comment: Using metagenome assembly and binning to identify and mitigate contamination in
by
Brian Bushnell
19k
It's not a silly question! And yes, it can be done. JGI is currently testing various binning tools to try to find the best protocol for t…
Answer: GO categorization
by
geneontologyhelp
▴
270
[We have this in our FAQ][1]. PANTHER version 18.0, which powers the enrichment analysis on our homepage, has [143 species][2] loaded and …
Comment: Problematic fastq files...How can we trust them?
by
blackadder
▴
30
Thanks for the feedback fellas! I agree with the aforementioned!
Comment: Which program, tool, or strategy do you use to visualize genomic rearrangements?
by
cmdcolin
★
3.4k
i collect a large list of tools for visualization, some are specialized for SVs and re-arrangements. you can filter by tag (SV, CNV, compar…
Answer: The number of variations in the pan-genome is reduced compared to the variations
by
Jordan M Eizenga
▴
410
If variants overlap in the genome, `vg deconstruct` will combine them into one locus with multiple alleles. If your input VCF has a lot of …
Answer: How to find node Postion and source(sample) ?
by
Jordan M Eizenga
▴
410
You can use `vg find -P` for this. This command is not really designed to be used frequently throughout the genome (each invocation loads t…
Comment: How Can I move the scattered dots more closer into the center of box ?
by
Brian Bushnell
19k
I would just draw them in by hand where you want them.
Comment: How to identify CG, CHG, or CHH from MeDIP data
by
Tm
★
1.1k
I know that CpG types can be identified using whole genome bisulphite data. But could it be possible using MeDIP data too?
We tried using Q…
Comment: Problematic fastq files...How can we trust them?
by
Brian Bushnell
19k
I'd have to agree there... while you can generally recover a fastq to the point that it is spec-compliant, you don't know how or why the f…
Answer: Finding human .vcf files online to download
by
cmdcolin
★
3.4k
----------
some common ones include
1000 genomes vcf (large, multi-sample) http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/
…
Comment: GO categorization
by
m.habib
•
0
Thanks Istvan for your reply. I think these programs will do the same as Trinotate. Trinotate searches against numerous databases and gener…
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
by
jv
★
1.2k
I wonder if using cell hashing, which would allow pooling of cells from multiple samples before droplet formation, could improve things her…
Comment: Where Can I Find The Basepair Positions Of Chromosome Bands?
by
Malachi Griffith
19k
And the hg38 version can be found here:
https://hgdownload.soe.ucsc.edu/goldenPath/hg38/database/cytoBand.txt.gz
And for convenience, upda…
Answer: How Can I move the scattered dots more closer into the center of box ?
by
Trivas
★
1.5k
You added a position dodge on your boxplot but not on your points.
Traffic: 1374 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6