Limit : this year
all time today this week this month this year
421 results • Page 3 of 9
Sort: Votes
Rank Views Votes Replies
12
votes
2
replies
3.0k
views
Forum: List of genome annotation tools (>140)
gene genome
updated 11 months ago by 43k • written 4.7 years ago by 8.6k
11
votes
9
replies
2.5k
views
7 follow
Forum: Feature Selection and Dimensionality Reduction in 10X scRNA-seq data
software-error pca scRNA-seq
updated 12 months ago by 43k • written 4.4 years ago by 82k
11
votes
6
replies
1.6k
views
Forum: Posting a preprint paper on biostars.com
preprint
updated 11 months ago by 43k • written 5.5 years ago by ▴ 760
11
votes
5
replies
6.5k
views
Forum: Slurm, Son of Grid Engine, Mesos, and Hadoop YARN vs HTCondor and Torque
PBS HPC SDSC Torque
updated 11 months ago by 43k • written 5.8 years ago by ★ 9.4k
11
votes
9
replies
2.3k
views
Forum: Survey: help define Gencode and NCBI primary transcripts
refseq ensembl gencode ncbi transcript
updated 11 months ago by 43k • written 6.1 years ago by 23k
11
votes
5
replies
1.5k
views
Forum: What bioinformatic training?
training RNA-Seq illumina
updated 11 months ago by 43k • written 5.0 years ago by ▴ 150
11
votes
8
replies
1.4k
views
6 follow
Forum: How to write a review article in bioinformatics
article review
updated 8 months ago by 43k • written 9 months ago by ▴ 10
11
votes
13
replies
4.6k
views
6 follow
Forum: NGS Data storage solutions for small organisations or big labs
big-data HTS storage NGS metagenomics
updated 11 months ago by 43k • written 4.9 years ago by ▴ 830
11
votes
5
replies
4.8k
views
Forum: Bioinformatics Workstation Suggestions
RNA-Seq next-gen workstation
updated 11 months ago by 43k • written 4.9 years ago by ▴ 110
11
votes
7
replies
6.6k
views
Forum: Using Graphics Processing Units (GPUs) in bioinformatics
algorithm GPU
updated 11 months ago by 43k • written 4.7 years ago by ▴ 310
11
votes
8
replies
1.7k
views
Forum: Bioinformatics cores pricing model
pricing-models core Bioinformatics-services
updated 11 months ago by 43k • written 5.2 years ago by ▴ 160
10
votes
10
replies
1.7k
views
Forum: Doctor looking fertility for a collaborator for text mining on pubmed
text-mining fertility pubmed
updated 12 months ago by 43k • written 6.5 years ago by • 0
10
votes
8
replies
3.1k
views
6 follow
Forum: Cancer research for computer science student
cancer research computer-science
updated 7 months ago by • 0 • written 6.5 years ago by ▴ 70
10
votes
6
replies
2.2k
views
Forum: How to acknowledge in the paper a reference genome that hasn't been published yet?
reference paper
updated 11 months ago by 43k • written 5.7 years ago by ▴ 140
10
votes
15
replies
2.2k
views
Forum: How should reference genome fasta files be distributed by UCSC?
reference-genome fasta freeze ucsc-genome-browser
updated 11 months ago by 22k • written 14 months ago by ★ 1.6k
10
votes
11
replies
4.2k
views
7 follow
Forum: What made you interested in Bioinformatics?
career
updated 12 months ago by 43k • written 6.5 years ago by ▴ 990
10
votes
7
replies
2.3k
views
Forum: How to learn bioinformatics?
learning
updated 3 months ago by ★ 1.3k • written 24 months ago by ▴ 20
10
votes
6
replies
1.3k
views
6 follow
Forum: Pros and cons to do biomedical research in pharmaceutical company
industry career academia
updated 11 months ago by 43k • written 4.2 years ago by ★ 9.4k
10
votes
7
replies
2.0k
views
Forum: Is trimming always better?
RNA-Seq QC trimmomatic trimming
updated 11 months ago by 43k • written 4.9 years ago by ▴ 330
10
votes
4
replies
5.8k
views
Forum: Bioinformatics: Which language should I learn
programming
updated 11 months ago by 43k • written 5.0 years ago by • 0
9
votes
10
replies
1.7k
views
Forum: Brainstorming: applying bioinformatics NOT to public field. Ideas and perspectives
applied-sciences data-analysis
updated 11 months ago by 43k • written 6.1 years ago by ★ 1.3k
9
votes
1
reply
7.3k
views
Forum: Master in statistics or bioinformatics
masters career statistics
updated 11 months ago by 43k • written 10.0 years ago by ▴ 50
9
votes
6
replies
1.5k
views
Forum: How to start my career in Bioinformatics
career
updated 11 months ago by 43k • written 3.7 years ago by ▴ 10
9
votes
10
replies
17k
views
8 follow
Forum: Open Source Bioinformatics projects for beginners
Open-Source Beginners
updated 3 months ago by • 0 • written 6.3 years ago by ▴ 40
9
votes
6
replies
1.4k
views
Forum: New Aligner Tool - Would you be interested in this ?
ChIP-Seq alignment Assembly next-gen rna-seq
updated 11 months ago by 43k • written 6.1 years ago by ▴ 30
9
votes
11
replies
3.3k
views
7 follow
Forum: Fields with biggest demand for bioinformatics?
career
updated 11 months ago by 43k • written 5.3 years ago by ▴ 200
9
votes
6
replies
1.9k
views
6 follow
Forum: GTF files from Ensembl Releases 105 and 106 unsorted
Ensembl bug GTF
updated 8 months ago by 82k • written 18 months ago by ▴ 30
9
votes
14
replies
2.4k
views
Forum: MS Bioinformatics Project
assembly sequencing alignment R SNP
updated 11 months ago by 43k • written 6.1 years ago by ▴ 10
9
votes
3
replies
3.2k
views
Forum: Why doesn't Swift have an active bioinformatics community project like rust-bio, Biogo and BioJulia?
Swift
updated 12 months ago by 43k • written 6.4 years ago by • 0
9
votes
8
replies
5.2k
views
Forum: R or python, which one do you prefer in analysing scRNAseq datasets?
R RNA-Seq python
updated 11 months ago by 43k • written 6.0 years ago by • 0
9
votes
10
replies
1.3k
views
6 follow
Forum: What's more clear, loops or functions?
R
updated 11 months ago by 43k • written 5.6 years ago by ▴ 110
8
votes
4
replies
2.7k
views
Forum: SNP calling in 2018
variant gatk SNP
updated 12 months ago by 43k • written 6.2 years ago by ▴ 640
8
votes
9
replies
3.7k
views
8 follow
Forum: How can I contribute to the Bioinformatics community as a Software Engineer
software-engineer
updated 11 months ago by 43k • written 5.5 years ago by ★ 1.1k
8
votes
6
replies
4.8k
views
6 follow
Forum: Are OTUs an accurate measure of abundance?
next-gen 16S-rRNA
updated 12 months ago by 43k • written 6.3 years ago by ▴ 30
8
votes
6
replies
2.9k
views
Forum: Demonstrating Exponential Growth In Pre-School
education
written 10.2 years ago by 10k
8
votes
1
reply
7.3k
views
Forum: What are chromatin states ?
genome ChIP-Seq
3 months ago by rohitsatyam102 ▴ 860
8
votes
6
replies
2.5k
views
Forum: How do you organize sequence data (FASTQs)?
RNA-Seq sequencing
updated 11 months ago by 43k • written 6.1 years ago by ▴ 280
8
votes
11
replies
1.8k
views
Forum: What makes a good bionformatics prediction service from the point of user experience?
server prediction-service
updated 12 months ago by 43k • written 6.6 years ago by ▴ 40
8
votes
4
replies
1.8k
views
Forum: Unsolved Topics in Bioinformatics
bioinformatics
updated 11 months ago by 43k • written 6.1 years ago by ▴ 40
8
votes
15
replies
2.4k
views
7 follow
Forum: How to identify your analytic data is true?
RNA-Seq ChIP-Seq next-gen-sequencing
updated 12 months ago by 43k • written 6.8 years ago by ▴ 80
8
votes
7
replies
1.4k
views
Forum: Is it okay to pool sample for RNAseq and proteomics study?
RNA-Seq
updated 11 months ago by 43k • written 4.5 years ago by ▴ 10
8
votes
7
replies
6.5k
views
6 follow
Forum: Bioinformatic or bioinformatics?
spelling
updated 12 months ago by 43k • written 6.6 years ago by ▴ 310
8
votes
7
replies
853
views
6 follow
Forum: Tower Server configuration for NGS data analysis
NGS
updated 12 weeks ago by ▴ 120 • written 3 months ago by • 0
7
votes
4
replies
1.2k
views
Forum: Specific question on torturing the data until it confesses
ipa gene-set-enrichment statistics
updated 12 months ago by 43k • written 3.4 years ago by ▴ 330
7
votes
10
replies
1.8k
views
Forum: Current MCB major thinking of going into Bioinformatics
career
updated 11 months ago by 43k • written 5.7 years ago by • 0
7
votes
3
replies
1.7k
views
Forum: [Please share] How do you keep your NGS data analysis methods/ strategies up to date? (e.g. Data sub-groupping, datasets overlapping, etc.)
NGS RNA-Seq ChIP-Seq
updated 12 months ago by 43k • written 6.7 years ago by ▴ 180
7
votes
4
replies
1.5k
views
Forum: Studying for a Bioinformatics degree
sequence R next-gen gene RNA-Seq
updated 11 months ago by 43k • written 4.3 years ago by ▴ 20
7
votes
4
replies
2.0k
views
Forum: Bioinformatics / Computational Biology PhD
Computational-Biology bioinformatics PhD
updated 10 months ago by 43k • written 8.2 years ago by • 0
7
votes
4
replies
1.1k
views
Forum: [Meta] Use of AI
AI Artificial-Intelligence meta ChatGPT
updated 11 months ago by 43k • written 11 months ago by 4.2k
7
votes
8
replies
2.4k
views
Forum: Virus Genome Length and GC Content of SARS-COV-2 causing COVID-19
sequence genome
updated 11 months ago by 43k • written 4.1 years ago by ▴ 30
421 results • Page 3 of 9
Recent Votes
The Biostar Herald for Monday, May 13, 2024
C: What % of rRNA contamination is acceptable?
A: What % of rRNA contamination is acceptable?
A: GC bias correction for Chip-SEQ
Comment: Help with IGV abbreviation
A: How to get read counts on transcript level using featurecounts?
Answer: Vcf file sorting
Recent Locations • All
Germany, 1 minute ago
Russian Federation, 2 minutes ago
China, 3 minutes ago
Germany, 4 minutes ago
Poland, 4 minutes ago
Italy, 4 minutes ago
Oviedo, 6 minutes ago
Recent Awards • All
Popular Question to gubrins ▴ 290
Popular Question to nhaus ▴ 360
Popular Question to sarahmanderni ▴ 100
Popular Question to O.rka ▴ 720
Popular Question to jiyoung ▴ 20
Autobiographer to Jeol ▴ 20
Popular Question to Pegasus ▴ 100
Recent Replies
Comment: Overlapping Ranges within Granges object by ATpoint 82k
I would probably collapse overlapping regions with `reduce` to create the second GRanges. Can you add some representative data? Using dput?
Comment: Overlapping Ranges within Granges object by ntsopoul ▴ 60
I have one Granges object and not two. Every IRanges entry is the critical region of the gRNA. Can this still work?
Answer: Extracting only 4-fold degenerate sites from gene sequences/alignments? by J. ▴ 10
FYI if you also have this problem, this seems to be a pretty good solution: https://github.com/harvardinformatics/degenotate
Comment: Biomart issue, why so few 3'utrs? by GenoMax 142k
AFAIK "MANE" project is only for human protein-coding genes. One potential explanation. Out of the 2000 ID's only 125 may be MANE. https:…
Answer: Biomart issue, why so few 3'utrs? by i.sudbery 19k
The MANE-select transcripts are pairs of identically annotated transcripts in ReqSeq and Ensembl. The 3' UTR is the region where otherwise …
Comment: sci-RNA-seq by ATpoint 82k
Please understand that this impossibly can be answered without any code or plots, or details in general. "Hey my car does not start, it mak…
Comment: Biomart issue, why so few 3'utrs? by i.sudbery 19k
Which species is this?
Comment: How to access GWAVA software of data by GenoMax 142k
Please email the author (grsr at ebi.ac.uk) and let them know that the link above is not available.
Comment: CNVKIT - unable to produce scatter and diagram pdfs by Anitha • 0
The normal samples is pooled into single reference for cohort. In this I have a doubt, here the normal sample referred as sample which took…
Comment: CNVkit for somatic copy number detection by Anitha • 0
The normal samples is pooled into single reference for cohort. In this I have a doubt, here the normal sample referred as sample which took…
Comment: CNVkit for somatic copy number detection by Anitha • 0
The normal samples is pooled into single reference for cohort. In this I have a doubt, here the normal sample referred as sample which took…
Answer: Overlapping Ranges within Granges object by ATpoint 82k
There is no one-hit function in GenomicRanges, but you can stick something together using a combination of `findOverlaps` to first find ove…
Comment: Galaxy StringTie error by trkfs • 0
Hi, I did not encounter any " \ - " characters in the fastq input files, and it doesn't seem to be present in any other files either. Thank…
Comment: How to interpret infinite odds ratio? by Lukas • 0
Thanks you for your answer. But according that links interpretation of inf odds ratio is up to hypothesis of the researcher.So my solution …
Comment: How to access GWAVA software of data by nonaddldy ▴ 10
Not found in https://ftp.sanger.ac.uk/resources/software/gwava/ ![][1] [1]: /media/images/f69695ec-e047-44f6-95ce-cd4edf1c
Traffic: 3117 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6