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2.6k
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List of Protein Complexes and their Proteins in E.Coli
E.coli Protein Complex
8.8 years ago by Benni ▴ 30
0
votes
1
reply
1.7k
views
How to check if my starters occur bacteria species?
silva bacteria
updated 8.8 years ago by 5.1k • written 8.8 years ago by ▴ 870
0
votes
0
replies
1.9k
views
Are the identified SNPs in the given plot paralogs or positive variants (alleles)?
alignment SNP paralogs alleles
updated 8.8 years ago by 20 • written 8.9 years ago by ★ 1.6k
4
votes
4
replies
2.1k
views
How to get p-value from differential analysis involving normal and tumor samples?
differential python p-value analysis
updated 2.2 years ago by 45k • written 8.8 years ago by ▴ 80
1
vote
10
replies
6.4k
views
which field has more scope Bioinformatics or Biomedical engineering at MS level???
biomedical
updated 2.2 years ago by 45k • written 8.8 years ago by • 0
2
votes
1
reply
2.3k
views
hg38: genomic coordinates
Assembly genome
8.8 years ago by NAVANEETHAN.R ▴ 10
0
votes
1
reply
2.2k
views
help request for running SOAPdenovo
Assembly
updated 8.8 years ago by 5.3k • written 8.8 years ago by ▴ 300
17
votes
10
replies
15k
views
6 follow
Where Can I Download All Exons Of The Human Genome In Fasta Format (One Big File!) ?
fasta human-genome exon
updated 2.2 years ago by 45k • written 12.2 years ago by ▴ 70
5
votes
5
replies
2.0k
views
Human reference genome - remapping coordinates
genome Assembly
8.8 years ago by NAVANEETHAN.R ▴ 10
0
votes
2
replies
2.5k
views
Platanus running problem
software error Assembly genome
8.8 years ago by bampress • 0
15
votes
17
replies
3.4k
views
Is there any NGS tool which produce long pairwise reads?
genome next-gen pair-read long-read alignment
updated 8.8 years ago by 21k • written 8.8 years ago by ▴ 40
0
votes
3
replies
1.7k
views
How can we know that the alignment files (bam) contains error alignment?
alignment
updated 8.8 years ago by • 0 • written 8.8 years ago by ▴ 80
2
votes
3
replies
1.4k
views
Evolution in Primates
sequence genome
updated 24 months ago by 45k • written 8.8 years ago by ▴ 10
4
votes
2
replies
1.5k
views
How to connect to PubMed database?
ncbi pubmed
updated 8.8 years ago by 9.8k • written 8.8 years ago by ▴ 870
0
votes
3
replies
3.2k
views
GTEx genotype data
SNP
updated 8.8 years ago by 20 • written 8.9 years ago by • 0
0
votes
0
replies
1.4k
views
Querying MetaboAnalyst Dynamically for Multiple Requests - API?
MetaboAnalyst MSEA metabolite enrichment-analysis
8.8 years ago by areyoujokingme ▴ 70
12
votes
5
replies
17k
views
Get Query Coverage From Local Blast
blast coverage
updated 2.6 years ago by 45k • written 12.6 years ago by ▴ 30
1
vote
3
replies
3.1k
views
Copy Number Variation Map and Analysis
R genome CNV
updated 8.8 years ago by ★ 4.0k • written 8.8 years ago by ▴ 30
0
votes
3
replies
3.5k
views
SPAdes 3.9.0 will not run on Mac (10.10.5)
Assembly
8.8 years ago by danni_lynne • 0
0
votes
0
replies
1.5k
views
R script to compare GEE, HLM, CLR
GEE HLM CLR
8.8 years ago by Shicheng Guo ★ 9.6k
0
votes
0
replies
1.8k
views
Best-guessing insert size and stddev in MISO using paired-end data versus running MISO single ended
RNA-Seq splicing miso
8.8 years ago by floris.barthel ▴ 50
6
votes
3
replies
5.5k
views
Filter VCF on Number of genotyped individuals
SNP VCF Filtering Transcriptome
updated 8.8 years ago by ★ 3.8k • written 8.8 years ago by ▴ 10
4
votes
5
replies
3.1k
views
Convert specific regions in bam file to vcf and annotating the vcf
exome sequencing bam vcf subset
8.8 years ago by komal.rathi ★ 4.1k
0
votes
3
replies
1.4k
views
Error with gff3_to_embl
software error
updated 8.8 years ago by 48k • written 8.8 years ago by ▴ 70
1
vote
0
replies
3.0k
views
Removal of rare OTUs before calculating community distances / ADONIS / NMDS
16s microbiome Vegan NMDS adonis
8.8 years ago by dmcleanuk ▴ 30
0
votes
0
replies
1.4k
views
SVS program for DNA Seq
next-gen
updated 8.8 years ago by 48k • written 8.8 years ago by ▴ 10
3
votes
4
replies
1.6k
views
Where to find a list of known SNP's for a given genomic region
SNP phasing
updated 8.8 years ago by ▴ 560 • written 8.8 years ago by • 0
0
votes
0
replies
1.5k
views
How to favor consistently occurring rare event in CRISPR screen analysis
CRISPR
8.8 years ago by morovatunc ▴ 560
4
votes
1
reply
4.8k
views
STITCH compound identifier not found
software-error stitch
updated 2.7 years ago by 45k • written 9.8 years ago by ▴ 10
7
votes
5
replies
4.6k
views
Has anybody used TEToolkit successfully to quantify transposable elements?
transposable element
updated 8.8 years ago by 105k • written 9.1 years ago by ▴ 520
4
votes
18
replies
3.1k
views
Get Info gen sumary
gen
updated 8.8 years ago by 48k • written 8.8 years ago by ▴ 110
2
votes
8
replies
6.0k
views
Genotype representation for male chromosome X and Y
snps dnaseq vcf genotype
8.8 years ago by bioinforesearchquestions ▴ 370
0
votes
1
reply
1.6k
views
Mendelian Inheritance Rate (CNV)
CNV Mendel Mendelian Inheritance
8.8 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
0
replies
1.8k
views
Job: Assistant Professor of Biology Computational Biologist/ Genomicist Colby College Waterville, ME
tenure-track genomics higher-education faculty
updated 2.2 years ago by 45k • written 8.8 years ago by • 0
7
votes
3
replies
1.5k
views
New to bioinformatics, ask for some help
sequencing
updated 8.8 years ago by 48k • written 8.8 years ago by • 0
2
votes
3
replies
3.4k
views
Map GO Terms to Protein/Gene of E.coli
GO E.coli
updated 8.8 years ago by 7.6k • written 8.8 years ago by ▴ 30
1
vote
8
replies
2.2k
views
Get gVCF file from genome coordinates
gVCF coorinates hg19
updated 8.8 years ago by 48k • written 8.8 years ago by ★ 1.5k
0
votes
0
replies
3.3k
views
Job: Postdoctoral Fellow in Computational Biology - Boston University School of Medicine, Boston, MA, USA
computational-biology R Matlab
updated 2.2 years ago by 45k • written 8.8 years ago by ▴ 20
0
votes
5
replies
3.4k
views
RNASEQ GE analysis, p-values zero whereas fold changes are not??
RNA-Seq R edgeR
8.8 years ago by begumozemek • 0
2
votes
0
replies
1.6k
views
Compare SNP frequency of patient cohort to DBSNP and test for significance
SNP
8.8 years ago by zeynk ▴ 20
0
votes
3
replies
1.5k
views
Where to download vcf2sqlite tool and are there any similar available somewhere?
vcf sql
8.8 years ago by valentina_stepanenko • 0
1
vote
4
replies
4.1k
views
creating a blast database
blast
8.8 years ago by sukesh1411 ▴ 30
5
votes
3
replies
2.2k
views
Job: Scientific Application Developer (Basel, Switzerland)
Science application
updated 2.2 years ago by 45k • written 8.8 years ago by ▴ 20
0
votes
2
replies
2.8k
views
Where to download earlier versions of GWAS Catalog?
GWAS
updated 2.9 years ago by 45k • written 9.6 years ago by ▴ 590
0
votes
0
replies
1.8k
views
disabling duplicate read filter -Mutect 1.1.4
GATK Mutect
8.8 years ago by Kssr ▴ 110
14
votes
15
replies
6.0k
views
How do I get the gene annotation for the latest version (GRCh38)?
gene GWAS
updated 8.8 years ago by 7.6k • written 8.8 years ago by ▴ 40
1
vote
2
replies
2.3k
views
SnpEff html and .vcf file result are not matching
snp
8.8 years ago by Sudhir Jadhao ▴ 70
0
votes
0
replies
1.5k
views
significant testing for species abundancy
metagenome pvalue abundance
8.8 years ago by Prasad ★ 1.6k
0
votes
0
replies
1.5k
views
Annotating resequenced genome
genome sequencing
8.8 years ago by boczniak767 ▴ 870
2
votes
2
replies
1.4k
views
Gene function prediction
coxpression co-relation Gene ontology enrichment
updated 8.8 years ago by 48k • written 8.8 years ago by ▴ 30
121,395 results • Page 1783 of 2428
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Answer: Batch correction in TNBC epithelial cells
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Answer: Batch correction in TNBC epithelial cells
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feature selection using random forest
Where To Download Mouse Mm10 Dbsnp Database With Vcf Format
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Comment: Single-cell RNA Sequencing - transcript abundance estimation using Alevin-Fry by Rob 7.1k
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I am not familiar with the package `EnhancedVolcano`, but based on your code, should not you be able to change the y-axis limits through th…
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Hi, Please check my previous answer to a similar post/question on this forum: [When should I NOT apply batch correction for my single-cel…
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> (1) Is my pipeline correct? Especially re-applying the harmony to the sub-setted the TNBC epithelial cells. You **can** do that. No prob…
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At my workplace I created a Singularity image that has most of the C/C++ libraries installed, and R's library path pointing to an image-spe…
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Thank you for helping me out. Other related species have genomes ranging between 400 and 700 Mb so the length given here by genomescope see…
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What is the expected genome size and ploidy for this organism? Can you post the busco results?
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I think this is a borderline bioinformatics question, but I'll still attempt to answer. You won't break the computer by merging all three …
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Are you using command line or some sort of GUI? Post the full command if you are doing this on the command line.
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But wait, is the idea with modules that you supply a preloaded config for that module, or that you supply a *path* to a separate config, li…
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