4.8 years ago by
sahahig469
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updated 4.8 years ago by
clement.train
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written 4.9 years ago by
crl111222
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4.8 years ago by
anasofiamoreira94
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4.8 years ago by
Marius
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updated 2.1 years ago by
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written 4.8 years ago by
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updated 4.8 years ago by
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written 8.7 years ago by
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4.8 years ago by
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4.8 years ago by
giulia.trauzzi
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updated 4.8 years ago by
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4.8 years ago by
avichaireich
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4.8 years ago by
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4.8 years ago by
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updated 2.8 years ago by
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written 4.8 years ago by
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written 4.8 years ago by
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written 5.1 years ago by
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4.8 years ago by
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written 4.8 years ago by
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4.8 years ago by
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You can run Scrublet before filtering cells with high gene counts and compare the doublet score vs `n_counts_genes`.
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Got it! I will try to switch their name and re-run the cellranger arc. Thank you very much, @arup !
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The barcode files with 24nt read length W71_LUNGrep2_S6_L001_R3_001.fastq.gz and W71_LUNGrep2_S6_L002_R3_001.fastq.gz should be the R2.
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