Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : all time
all time
today
this week
this month
this year
1,000 results • Page
5 of 20
Sort: Views
Rank
Views
Votes
Replies
25
votes
39
replies
5.9k
views
8 follow
Forum:
Bioinformatics Study Group
study-group
updated 14 months ago by
Ram
43k • written 10.9 years ago by
Olivier
▴ 440
5
votes
2
replies
5.9k
views
Forum:
Solution: Gatk Doesn't Recognize Karyotypic Ordering
picard
gatk
hg19
updated 14 months ago by
Ram
43k • written 10.3 years ago by
Charles Warden
8.2k
32
votes
9
replies
5.9k
views
Forum:
Embrace The Non-Googlers Of Biostars
meta
biostars
updated 15 months ago by
Ram
43k • written 10.9 years ago by
KCC
★ 4.1k
60
votes
25
replies
5.9k
views
8 follow
Forum:
Am I crazy, or are most published RNA-seq studies vastly underpowered?
sample-size
statistical-power
RNA-Seq
updated 11 months ago by
Ram
43k • written 3.8 years ago by
telroyjatter
▴ 230
10
votes
4
replies
5.8k
views
Forum:
Bioinformatics: Which language should I learn
programming
updated 11 months ago by
Ram
43k • written 5.0 years ago by
MEHAR ALI RAZA
• 0
28
votes
31
replies
5.8k
views
8 follow
Forum:
Biostar Ads Are Now Live. Feedback And Comments Are Sought.
biostars
updated 15 months ago by
Ram
43k • written 11.0 years ago by
Istvan Albert
100k
10
votes
0
replies
5.8k
views
Forum:
Kai Wang of Annovar and PennCNV uses this
uses-this
updated 14 months ago by
Ram
43k • written 9.6 years ago by
Istvan Albert
100k
15
votes
7
replies
5.8k
views
8 follow
Forum:
How would you master a programming language (e.g. R, python etc)
Python
programming
R
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
Mo
▴ 920
27
votes
22
replies
5.8k
views
8 follow
Forum:
Recommendations of Linux distros for beginners in bioinformatics
training
linux
updated 12 months ago by
Ram
43k • written 6.5 years ago by
ropolocan
▴ 810
7
votes
6
replies
5.7k
views
Forum:
OMICtools - Call for curators
NMR
MS
NGS
microarray
PCR
updated 3.1 years ago by
Ram
43k • written 9.6 years ago by
arnaud.desfeux
▴ 450
24
votes
13
replies
5.7k
views
6 follow
Forum:
The ethics of sci-hub
paywall
open-science
journals
publications
updated 13 months ago by
Ram
43k • written 7.9 years ago by
WouterDeCoster
47k
57
votes
9
replies
5.7k
views
14 follow
Forum:
Handbooks for Bioinformatics Ninjas
gallery
updated 13 months ago by
Ram
43k • written 8.0 years ago by
Shicheng Guo
★ 9.4k
4
votes
3
replies
5.7k
views
Forum:
Masters Or Phd In Bioinformatics
masters
career
phd
updated 15 months ago by
Ram
43k • written 11.2 years ago by
scott.goldweber
• 0
54
votes
16
replies
5.7k
views
13 follow
Forum:
The new era of bioinformatics: simple and fast tools, fewer and more informative data
kallisto
computational-cost
updated 15 months ago by
Ram
43k • written 9.0 years ago by
Istvan Albert
100k
26
votes
6
replies
5.6k
views
9 follow
Forum:
Making a living with bioinformatics
career
updated 23 months ago by
Ram
43k • written 6.0 years ago by
ruda
▴ 150
88
votes
24
replies
5.6k
views
10 follow
Forum:
How To Be Helpful As A Biostar Moderator/Editor?
biostars
updated 15 months ago by
Ram
43k • written 11.2 years ago by
aidan-budd
1.9k
70
votes
19
replies
5.6k
views
13 follow
Forum:
Thrown Into A Bioinformatics Position
computational-analysis
updated 22 months ago by
Ram
43k • written 8.6 years ago by
System
▴ 170
32
votes
5
replies
5.6k
views
Forum:
ipython notebooks on bioinformatics and genomics
python
updated 14 months ago by
Ram
43k • written 8.9 years ago by
Pappu
★ 2.1k
12
votes
24
replies
5.6k
views
8 follow
Forum:
Biostar 2.0, Second Beta, Help Us Test The New Site
biostars
updated 15 months ago by
Ram
43k • written 10.1 years ago by
Istvan Albert
100k
10
votes
10
replies
5.6k
views
Forum:
Data integration between gene expression - RNAseq and DNA methylation - Illumina 450k
RNA-Seq
dna-methylation
updated 13 months ago by
Ram
43k • written 7.9 years ago by
carlos_marchi
▴ 80
12
votes
12
replies
5.6k
views
8 follow
Forum:
Please, please, define what a 'read' is.
read
updated 13 months ago by
Ram
43k • written 7.6 years ago by
sebastian.schuth
▴ 20
31
votes
4
replies
5.6k
views
8 follow
Forum:
What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2016?
Assembly
sequencing
RNA-Seq
updated 13 months ago by
Ram
43k • written 7.4 years ago by
dago
★ 2.8k
1
vote
1
reply
5.5k
views
Forum:
MD/Masters vs MD/PhD
ms
md
phd
education
updated 2.0 years ago by
Ram
43k • written 9.2 years ago by
reginaphalange
• 0
11
votes
6
replies
5.5k
views
Forum:
Biostar on Google Summer of Code. Suggest features that you would like to see!
biostars
gsoc
updated 15 months ago by
Ram
43k • written 10.0 years ago by
Istvan Albert
100k
17
votes
9
replies
5.5k
views
7 follow
Forum:
My Friend Anthony Made This Cool Mini-Site To Find A Freelance Bioinformatics Job. Can You Help Him Out?
career
updated 14 months ago by
Ram
43k • written 10.6 years ago by
Jeroen Van Goey
2.3k
22
votes
10
replies
5.4k
views
Forum:
Publishing Bioinformatics Results
subjective
conference
updated 15 months ago by
Ram
43k • written 11.0 years ago by
ugly.betty77
★ 1.1k
2
votes
4
replies
5.4k
views
Forum:
Plink calculator for calculating pairwise LD
LD
plink
SNP
updated 14 months ago by
Ram
43k • written 9.2 years ago by
mandecent.gupta
• 0
16
votes
5
replies
5.4k
views
Forum:
Greatest Achievements In Bioinformatics Other Than Human Genome
bioinformatics
updated 15 months ago by
Ram
43k • written 11.3 years ago by
Aleksandr Levchuk
3.2k
80
votes
34
replies
5.4k
views
11 follow
Forum:
Authorship issues- how to resolve?
authorship
updated 16 months ago by
Ram
43k • written 9.0 years ago by
datanerd
▴ 520
1
vote
8
replies
5.4k
views
Forum:
Would you use sci-hub's mirror site?
sci-hub
updated 11 months ago by
Ram
43k • written 4.4 years ago by
cduukj
• 0
15
votes
5
replies
5.4k
views
Forum:
Free Ensembl Courses
ensembl
genome-browser
updated 14 months ago by
Ram
43k • written 10.9 years ago by
Emily
23k
34
votes
23
replies
5.3k
views
8 follow
Forum:
Unbelievably rapid NGS analysis by Churchill
sequencing
NGS
churchill
2.1 years ago by
Ram
43k
80
votes
23
replies
5.3k
views
11 follow
Forum:
Are we facing a bioinformatician shortage?
salary
career
updated 14 months ago by
Ram
43k • written 9.5 years ago by
Christian
★ 3.0k
21
votes
13
replies
5.3k
views
12 follow
Forum:
User Friendly VCF Filtering Tools
vcf
variant-calling
updated 13 months ago by
Ram
43k • written 8.0 years ago by
andrew.j.skelton73
6.6k
28
votes
7
replies
5.3k
views
Forum:
Open Source projects to contribute to
contribute
open-source
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
shane
▴ 90
44
votes
11
replies
5.3k
views
7 follow
Forum:
Asking The Developers Before Asking Biostars
meta
updated 14 months ago by
Ram
43k • written 10.7 years ago by
Arnaud Ceol
▴ 860
13
votes
13
replies
5.2k
views
6 follow
Forum:
What Next After Snp Identification
disease
genomics
ngs
updated 14 months ago by
Ram
43k • written 10.4 years ago by
AP
▴ 80
47
votes
14
replies
5.2k
views
Forum:
Was FASTA ever popular?
FASTA
alignment
updated 13 months ago by
Ram
43k • written 7.6 years ago by
John
13k
15
votes
9
replies
5.2k
views
11 follow
Forum:
PhD research proposal - Need current topics
research
Phd
updated 22 months ago by
Ram
43k • written 8.3 years ago by
David_emir
▴ 490
9
votes
8
replies
5.2k
views
9 follow
Forum:
insert figure and code in the post of Biostars?
meta
biostars
updated 14 months ago by
Ram
43k • written 9.0 years ago by
Zhilong Jia
★ 2.2k
2
votes
2
replies
5.2k
views
Forum:
Sending Personal Messages To Users : Cool Feature To Implement Or Not [Biostar Network]
network
biostars
updated 15 months ago by
Ram
43k • written 12.1 years ago by
Sukhi Singh
11k
2
votes
5
replies
5.2k
views
Forum:
Metagenomics Raw dataset
metagenomics
updated 24 months ago by
Ram
43k • written 8.3 years ago by
deepakrishna.bioinfo
• 0
9
votes
8
replies
5.2k
views
Forum:
R or python, which one do you prefer in analysing scRNAseq datasets?
R
RNA-Seq
python
updated 12 months ago by
Ram
43k • written 6.0 years ago by
wt215
• 0
27
votes
17
replies
5.2k
views
Forum:
Data sharing via Bittorrent is coming to Biostar
biostars
bittorrent
updated 15 months ago by
Ram
43k • written 9.9 years ago by
Istvan Albert
100k
13
votes
12
replies
5.2k
views
6 follow
Forum:
How Can I Remove My Post From Biostar.
meta
biostars
updated 15 months ago by
Ram
43k • written 11.1 years ago by
shilpy
▴ 20
23
votes
15
replies
5.1k
views
6 follow
Forum:
On the usage of Golang
assembly
next-gen
alignment
updated 12 months ago by
Ram
43k • written 5.6 years ago by
Lucas Peres
▴ 80
37
votes
30
replies
5.1k
views
7 follow
Forum:
Spam In Rss Feeds
meta
RSS
updated 15 months ago by
Ram
43k • written 11.3 years ago by
Madelaine Gogol
5.3k
81
votes
21
replies
5.1k
views
16 follow
Forum:
[UPDATE] Thrown into a Bioinformatics Position
bioinformatics
updated 14 months ago by
Ram
43k • written 7.9 years ago by
Sinji
★ 3.2k
11
votes
4
replies
5.1k
views
Forum:
Can anyone with clinical experience tell me how to get involved in medical informatics?
clincal-informatics
updated 14 months ago by
Ram
43k • written 9.5 years ago by
Dan D
7.4k
3
votes
8
replies
5.1k
views
7 follow
Forum:
BSc Computer Science dissertation project ideas
gene
bayesian-network
regulatory-network
updated 20 months ago by
Ram
43k • written 8.6 years ago by
cars4urkids
• 0
1,000 results • Page
5 of 20
Recent Votes
The Biostar Herald for Monday, May 20, 2024
Answer: Generating Group/Cluster Lists from fastq files
The Biostar Herald for Monday, May 20, 2024
ClusterProfiler : What is GeneRatio and BgRatio?
A: ClusterProfiler : What is GeneRatio and BgRatio?
A: ClusterProfiler : What is GeneRatio and BgRatio?
C: Cleaning RNA-Seq data from rRNA
Recent Locations •
All
Whitefish, MT,
7 minutes ago
United States,
8 minutes ago
UK,
12 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087,
13 minutes ago
United States,
16 minutes ago
France,
17 minutes ago
France,
19 minutes ago
Recent Awards •
All
Popular Question
to
tothepoint
▴ 800
Commentator
to
GenoMax
142k
Popular Question
to
safeassli
▴ 10
Popular Question
to
curious
▴ 750
Popular Question
to
manaswwm
▴ 510
Popular Question
to
Raghad
• 0
Scholar
to
Pierre Lindenbaum
161k
Recent Replies
Comment: What marks a De-Novo Genome assembly as FAILED?
by
dthorbur
★ 2.0k
I'm unsure you'll be able to identify whole chromosomes that are not core from illumina reads alone. That might be easier to do with a micr…
Answer: Error in using BioSampleParser tool: subscript out of bounds
by
Mohamed Samir
▴ 20
Dear marco, We need to ask ourselves why it is not working for all bioprojects ? I have looked into this, and observed that as long as the…
Comment: Why most genes have high padj values
by
Ram
43k
You ***want*** ~3000 DE genes?<a href="" title="Text added because biostars parser needs it"></a>
Answer: Generating Group/Cluster Lists from fastq files
by
GenoMax
142k
> I was hoping to just do this in galaxy This is not a galaxy option but `clumpify.sh ` from BBMap suite can cluster sequences/dedupe th…
Comment: Practical Haplotype Graph v2 not finding correct paths
by
beantkapoor16
▴ 10
Hello, just wanted to check in if the code has been fixed yet? Thank you.
Comment: Super ehancers
by
jared.andrews07
★ 16k
Based on the [source code](https://bitbucket.org/young_computation/rose/src/feb35cb1d9556a76f8ac1f51521539bb30651343/ROSE_utils.py?at=maste…
Comment: HGVS Nomenclature of Multiple Indels found in Cis
by
Ram
43k
They're not addressing the actual question, just saying something tangentially related. It looks like their understanding of both consensus…
Comment: Super ehancers
by
Oburah
• 0
Hello, i encountered this problem when running ROSE, Do anyone know how to solve it? python2.7 ROSE_main.py -g HG38 -i /home/hesborn/…
Answer: How to generate an Upset plot in R to plot the shared variants between cell free
by
zx8754
11k
Try this example: library(UpSetR) #example input, 4 samples, 250 variants set.seed(1); d <- data.frame(matrix(sample…
Answer: Illumina methylation EPIC V2 array
by
fu_entomology
▴ 40
We have been using SeSAMe, it works well for the most part. They have an enrichment tool called KnowYourCG. You can check it out their vign…
Answer: How to find identical sequences in genome fasta file (by Python or any possible
by
GenoMax
142k
> My final purpose are find and remove any identical sequences present in my genome fasta file. You can use `clumpify.sh` from BBMap suite…
Comment: GO analysis: Indicate genes corresponding to the pathway
by
marco.barr
▴ 130
I think you have set a filter to get these pahways upstream from the DEG results. You should extract the IDs or names of the genes that you…
Comment: GATK Structural Variants Pipeline - Steps
by
Bioinformatics_begginner
▴ 20
Thank you for the response, I mean those tools aren't all the steps from fasta to vcf. Would be key understanding the aligner, reference us…
Comment: seqtk subseq in.fastq list.txt > out.fastq not extracting full sequence from
by
GenoMax
142k
Please accept the answer (green check mark) to provide closure to this thread.
Answer: GATK Structural Variants Pipeline - Steps
by
Pierre Lindenbaum
161k
> A structural variation pipeline for short-read sequencing https://github.com/broadinstitute/gatk-sv
Traffic: 2340 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6