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1,000 results • Page
3 of 20
Sort: Votes
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Votes
Replies
4
votes
11
replies
2.4k
views
Job:
Research advice needed
bioconductor
updated 12 months ago by
Ram
43k • written 7.2 years ago by
tfhahn
▴ 50
4
votes
0
replies
2.2k
views
Job:
Web/software developer(s) interested in open source, open science and citizen science
open-science
citizen-science
open-source
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Andrew Su
4.9k
4
votes
1
reply
2.9k
views
Job:
Computational Biologist In Colorado
University-of-Colorado
Computational-Biologist
updated 14 months ago by
Ram
43k • written 11.5 years ago by
brentp
24k
4
votes
2
replies
1.9k
views
Job:
Bioinformatics Analyst - NGS Metagenomics working in microbial ecology, Harpenden, UK
metagenomics
Megan
phyloseq
MG-RAST
updated 12 months ago by
Ram
43k • written 7.4 years ago by
dareen.evans
▴ 30
4
votes
2
replies
1.3k
views
Job:
Free lancer or Contractor for scRNA seq data analysis pipeline
scRNA-seq
updated 2.2 years ago by
cpad0112
21k • written 2.2 years ago by
Dataminer
★ 2.8k
4
votes
1
reply
2.9k
views
Job:
Staff Scientist (Cancer Genomics) - The Genome Institute, Washington University, Stl
cancer-genomics
updated 14 months ago by
Ram
43k • written 10.7 years ago by
Malachi Griffith
19k
4
votes
4
replies
2.8k
views
Job:
Opportunity: Research positions in computational biology at all levels: Postdoctoral, PhD and MS students
R
updated 11 months ago by
Ram
43k • written 5.5 years ago by
Habil
▴ 80
4
votes
2
replies
3.4k
views
Job:
Multiple Computational Biology Faculty Positions At The University Of Maryland, College Park
UMD
computational-biology
faculty
updated 14 months ago by
Ram
43k • written 11.5 years ago by
Istvan Albert
100k
4
votes
0
replies
2.0k
views
Job:
LAST CALL - Open PhD position: Inferring genomic information from bisulfite sequencing data
bisulfite-seq
ngs
phd
updated 11 months ago by
Ram
43k • written 6.5 years ago by
David Langenberger
11k
4
votes
0
replies
4.5k
views
Job:
Postdoctoral Scientist In Plant Computational Genomics
ngs
genomics
postdoc
updated 14 months ago by
Ram
43k • written 11.2 years ago by
VS
▴ 730
4
votes
1
reply
2.0k
views
Job:
Looking For A Bioinformatician To Form A Partnership In New Delhi, India
NGS
updated 14 months ago by
Ram
43k • written 11.3 years ago by
enbiofeer
• 0
4
votes
2
replies
2.9k
views
Job:
Software Engineer - Institute For Systems Biology, Seattle, Wa (South Lake Union)
r
python
java
updated 14 months ago by
Ram
43k • written 11.8 years ago by
kbarnett
▴ 20
4
votes
0
replies
1.7k
views
Job:
(Closed) Do you want to work with the Earth BioGenome Project in Norway?
assembly
genome
biodiversity
post-genomics
2.2 years ago by
Michael
54k
4
votes
0
replies
1.6k
views
Job:
Bioinformatician, DEEP consortium (Freiburg, Germany)
academia
updated 12 months ago by
Ram
43k • written 8.0 years ago by
Devon Ryan
104k
4
votes
0
replies
2.4k
views
Job:
Bioinformatics Software Engineer - Ontario Institute for Cancer Research
cancer
Assembly
updated 13 months ago by
Ram
43k • written 9.8 years ago by
jts
▴ 240
4
votes
0
replies
1.9k
views
Job:
Post-doctoral position in algorithms for cancer data analysis
ChIP-Seq
cancer
algorithms
updated 12 months ago by
Ram
43k • written 7.9 years ago by
valentina.boeva
▴ 40
4
votes
0
replies
1.2k
views
Job:
20 Fully funded PhD studentships in Quantitative Biology in Lausanne, Switzerland
phd
studentship
fellowship
updated 10 months ago by
Ram
43k • written 2.6 years ago by
Christophe Dessimoz
▴ 740
4
votes
1
reply
8.8k
views
Job:
Google: Bioinformatics and Computational Biology Lead, Special Projects
google
updated 13 months ago by
Ram
43k • written 9.5 years ago by
Pierre Lindenbaum
161k
4
votes
3
replies
1.7k
views
Job:
Senior Bioinformatics Scientist
Senior-Scientist
Geltor
updated 2.8 years ago by
Ram
43k • written 2.9 years ago by
Leon
▴ 10
4
votes
3
replies
5.5k
views
Job:
Open Positions At Human Longevity Inc., San Diego, Ca, Usa
genomics
stem-cell
updated 14 months ago by
Ram
43k • written 10.2 years ago by
Pierre Lindenbaum
161k
4
votes
0
replies
2.1k
views
Job:
R / Bioconductor core team Senior Programmer / Analyst
R
Bioconductor
updated 21 months ago by
Ram
43k • written 8.3 years ago by
Martin Morgan
★ 1.6k
4
votes
0
replies
2.7k
views
Job:
Database Developer (Vancouver, Bc) – Innatedb And Allergy And Asthma Portal – Systems Biology/Bioinformatics/Genomics
bioinformatician
database
updated 14 months ago by
Ram
43k • written 11.2 years ago by
Karin
▴ 50
4
votes
0
replies
5.6k
views
Job:
Bioinformatics PhD Studentship Available at Massey University, Auckland, New Zealand
Genomics
PhD
Transcriptomics
studentship
updated 13 months ago by
Ram
43k • written 10.0 years ago by
sschmeier
▴ 120
4
votes
0
replies
2.6k
views
Job:
Staff Scientist And Software Developer - The Genome Institute At Washington University Saint Louis
software-developer
staff-scientist
WUSTL
updated 14 months ago by
Ram
43k • written 11.2 years ago by
Chris Miller
22k
4
votes
1
reply
1.9k
views
Job:
The Netherlands Institute of Ecology is looking for a bioinformatician
sequencing
updated 12 months ago by
Ram
43k • written 7.9 years ago by
m.dehollander
▴ 50
4
votes
1
reply
3.2k
views
Job:
Computational Scientist (Bioinformatics Analyst, Metagenomics), Pennsylvania State University, USA
metagenomics
updated 21 months ago by
Ram
43k • written 9.0 years ago by
Istvan Albert
100k
4
votes
0
replies
1.5k
views
Job:
Four 4-year PhD studentships @ the Van de Peer Lab (VIB-UGent, Ghent, Belgium)
PhD
evolution
genomics
updated 10 months ago by
Ram
43k • written 4.6 years ago by
lieven.sterck
15k
4
votes
0
replies
4.6k
views
Job:
Job: Research Associate (Postdoctoral Position) In Bioinformatics At Ucl, London, Uk
ngs
bioinformatician
postdoc
updated 14 months ago by
Ram
43k • written 10.3 years ago by
astyanax.mexicanus
▴ 40
3
votes
0
replies
1.8k
views
Job:
Director, Webmaking Science Lab Via Mozilla
mozilla
software-carpentry
updated 14 months ago by
Ram
43k • written 11.4 years ago by
Mary
11k
3
votes
0
replies
3.3k
views
Job:
Bioinformatics Programmer / Web Developer, Su Lab, Scripps Research Institute, San Diego, CA, USA
citizen-science
crowdsourcing
big-data
updated 2.5 years ago by
Ram
43k • written 9.6 years ago by
Andrew Su
4.9k
3
votes
0
replies
2.4k
views
Job:
Two positions in bioinformatics and machine learning at a start-up in Cambridge, UK
gene-expression
R
machine-learning
updated 13 months ago by
Ram
43k • written 8.6 years ago by
Richard Smith
▴ 400
3
votes
0
replies
2.8k
views
Job:
PhD student position at Adam Mickiewicz University (Poland)
sequence
orphan-genes
gene
bacteria
updated 11 months ago by
Ram
43k • written 6.4 years ago by
Andrzej Zielezinski
11k
3
votes
1
reply
2.2k
views
Job:
Bioinformatics Master Project opportunity
R
RNA-Seq
updated 11 months ago by
Ram
43k • written 5.1 years ago by
Sebastian Lewandowski
▴ 30
3
votes
2
replies
766
views
Job:
Need Transcriptome bioinformatician's collaboration
next-gen-sequencing
R
RNA-seq
alignment
updated 10 months ago by
Ram
43k • written 3.1 years ago by
s.mojtabaghiasi
▴ 20
3
votes
0
replies
5.4k
views
Job:
Sr Bioinformatics Specialist, Tufts University, Boston Ma
ngs
HPC
microarray
project-management
updated 14 months ago by
Ram
43k • written 10.9 years ago by
Larry_Parnell
16k
3
votes
0
replies
2.4k
views
Job:
Core Facility Positions At Newcastle University, Uk
bioinformatician
updated 14 months ago by
Ram
43k • written 10.6 years ago by
Simon Cockell
7.4k
3
votes
0
replies
3.4k
views
Job:
(Senior) Research Associate In Bioinformatics And Comparative Genomics At Ucl, London
ngs
career
postdoc
updated 14 months ago by
Ram
43k • written 10.5 years ago by
Christophe Dessimoz
▴ 740
3
votes
2
replies
1.9k
views
Job:
Looking for a position in NGS microbiology
microbiology
postdoc
updated 12 months ago by
Ram
43k • written 7.6 years ago by
biotech
▴ 570
3
votes
0
replies
536
views
Job:
Bioinformatician, Funga, Austin Texas USA
eDNA
updated 6 months ago by
colindaven
6.4k • written 6 months ago by
Ann
▴ 30
3
votes
0
replies
3.2k
views
Job:
PostDoc position in Bioinformatics at Univ. Milano-Bicocca -- Milano(Italy)
next-gen
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
gianluca.dellavedova
▴ 50
3
votes
3
replies
2.5k
views
Job:
Freelancers for Personal Genomics Business
NGS
genome
Business
Freelancers
updated 13 months ago by
Ram
43k • written 9.9 years ago by
venkat.boffin
▴ 10
3
votes
0
replies
2.4k
views
Job:
Postdoc Positions in BIDMC - Harvard Medical School, in Computational Genetics & Computational Biology/Bionformatics
R
SNP
RNA-Seq
updated 11 months ago by
Ram
43k • written 5.6 years ago by
IV
★ 1.3k
3
votes
3
replies
3.9k
views
Job:
3-year PhD scholarship available in France (deadline extended)
biomarkers
cancer
R
machine-learning
updated 12 months ago by
Ram
43k • written 7.8 years ago by
pedro.ballester
▴ 30
3
votes
2
replies
1.1k
views
Job:
Postdoc in computational and experimental annotation of tRNA-related sequences
qPCR
plant
hybridization
genomics
trna
updated 10 months ago by
Ram
43k • written 4.6 years ago by
Andrzej Zielezinski
11k
3
votes
3
replies
3.4k
views
Job:
Junior and Senior Bioinformaticans - INVISTA - North East England
Catalysis
genome
RNA-Seq
Metabolomics
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
alec.foster
▴ 30
3
votes
0
replies
1.8k
views
Job:
Bioinformatics Scientist Harvard University, Boston, MA, USA
ChIP-Seq
FAIRE-Seq
Genomics
updated 12 months ago by
Ram
43k • written 7.4 years ago by
michele.clamp
▴ 30
3
votes
2
replies
1.9k
views
Job:
Senior Bioinformatics Engineer (1608)
software-engineering
forensics
NGS
updated 10 months ago by
Ram
43k • written 3.6 years ago by
tonya.stefanic
▴ 70
3
votes
3
replies
2.1k
views
Job:
Bioinformatician - Analyse 'omics data to help find drugs for rare diseases, Cambridge, UK
RNA-Seq
gene-expression
R
Drugs
updated 20 months ago by
Ram
43k • written 8.5 years ago by
Richard Smith
▴ 400
3
votes
0
replies
2.8k
views
Job:
Faculty Position in Computational Systems Biology at UC Riverside
systems-biology
updated 13 months ago by
Ram
43k • written 9.5 years ago by
thomas.mail.girke
▴ 30
3
votes
1
reply
2.8k
views
Job:
Multiple Scientist Positions at 23andMe, Inc. Mountain View, CA, USA
machine-learning
careers
genomics
updated 11 months ago by
Ram
43k • written 7.1 years ago by
joyce
▴ 30
1,000 results • Page
3 of 20
Recent Votes
A: Blast Settings For Short Sequences
A: Blast Settings For Short Sequences
Comment: Heatmap and rna-seq
Answer: Heatmap and rna-seq
Comment: Heatmap and rna-seq
A: should FASTA files be sorted before indexed with SAMtools?
Answer: A faidx-indexed FASTA format file or a FASTA format file
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Recent Replies
Answer: Correct way to compare multiple treaments between RNA-Seq samples using edgeR?
by
Gordon Smyth
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The comparison you've done seems exactly right to test whether treatment 2 modifies or enhances the effect of treatment 1. Have you exam…
Answer: How to use limma to find differentially expressed genes in response to a continu
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Gordon Smyth
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There's no need for form a contrast because the score variable is already in the model. A continuous variable is its own contrast. Just run…
Comment: Create a new bed file with all pairwise combinations between two other bed files
by
J
▴ 10
Oh wow, bedops closest-features, how did I overlook that!! I didn't know about it; thank you! Your awk script is beautiful. This worked per…
Comment: Create a new bed file with all pairwise combinations between two other bed files
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J
▴ 10
Thank you Pierre! I'll try this out with my full data set.
Answer: DNA methylation preprocessing
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cao510927
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I happend to see one paper doing the similar thing, share it with you guys, "A systematic evaluation of normalization methods and probe rep…
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Alex Reynolds
35k
I think Pierre's answer might be correct for your test input, but it doesn't account for the start position of the reference element and so…
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bk11
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You need to be clear about how `Seurat` defines highly variable genes here. Highly variable genes are the genes that have very high express…
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by
GenoMax
141k
Please include a link when you are recommending a tool. There can be programs with similar names.
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by
dsull
★ 5.8k
Check out clustergrammer from Avi Ma'ayan's lab.
Comment: how to combine multiple RNAseq count files into a single dataframe in R and unix
by
Ram
43k
Simple: ```r data <- lapply(files, read_tsv) data <- Reduce(merge, data) # or Reduce(full_join, data) ``` <a href="" title="Text added bec…
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You can make each process use a dedicated environment, see https://www.nextflow.io/docs/latest/conda.html#use-existing-conda-environments …
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Hi, Just thought I'd share this code snippet here for when each file contains multiple samples. I tried using lapply (as suggested by Ram)…
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Take your STAR alignment and sum all the counts for each gene. You can either do this by providing an annotation to STAR, or by running fea…
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If you run your data with plink 2.0, you will have ERRCODE column in your result file showing the reason behind "NA" p-value. https://www.b…
Comment: genome assembly records not present in assembly_summary.txt
by
sapuizait
▴ 10
jesus its in the Genbank file and I was looking at the refseq! I m such a moron - thanks for pointing it out -sorry about that :(
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