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1,000 results • Page
3 of 20
Sort: Views
Rank
Views
Votes
Replies
5
votes
2
replies
9.5k
views
Turning Seq objects into strings
sequence
4.7 years ago by
schlogl
▴ 160
1
vote
7
replies
9.4k
views
How to find up-regulated and down-regulated genes after GEO2R analysis?
GEO
genes
up-regulated
down-regulated
GEO2R
5.7 years ago by
DanielC
▴ 160
2
votes
4
replies
9.4k
views
num_threads with blastn in blast 2.6.0+
blast
5.0 years ago by
navela78
▴ 70
1
vote
4
replies
9.4k
views
R ggplot Align Y-Axis on multiple graphs
ggarrange
ggplot2
r
updated 4.3 years ago by
Biostar
20 • written 5.8 years ago by
jjrin
▴ 40
4
votes
6
replies
9.4k
views
Spades assembler output
Assembly
updated 16 months ago by
Ram
41k • written 7.9 years ago by
elbecerrasoto
▴ 30
4
votes
10
replies
9.3k
views
Questions about multithreading of BWA
bwa
multithread
updated 5.2 years ago by
Ram
41k • written 7.8 years ago by
michealsmith
▴ 790
2
votes
2
replies
9.3k
views
Imputation Analysis In Plink?
plink
gwas
imputation
11.8 years ago by
Davy
▴ 210
4
votes
3
replies
9.3k
views
Convert Tab delimited file to VCF file
snp
updated 18 months ago by
Ram
41k • written 8.1 years ago by
niharraul
• 0
2
votes
2
replies
9.3k
views
Multiple whole genome alignment tools ?
multiple whole genome
alignment
4.5 years ago by
Picasa
▴ 640
4
votes
2
replies
9.2k
views
Hisat2 versus Bowtie2
Exome-sequencing
hisat2
bowtie2
updated 6.4 years ago by
Biostar
20 • written 7.6 years ago by
nalpas.nicolas
▴ 20
3
votes
9
replies
9.2k
views
Random Forest returns "New factor levels not present in the training data"
R
Machine Learning
microarrays
5.8 years ago by
arronar
▴ 280
1
vote
6
replies
9.2k
views
How to use python to process .CEL file?
cel
affymetrix
python
R
cmap
updated 18 months ago by
Ram
41k • written 8.7 years ago by
zero_hsy
▴ 110
0
votes
19
replies
9.1k
views
Skip orientation as there are not enough pairs by bwa mem
whole genome
bwa
paired end sequencing
4.5 years ago by
seta
★ 1.8k
1
vote
13
replies
9.1k
views
MDS Plot R
RNA-Seq
4.4 years ago by
BioBaby
▴ 20
7
votes
5
replies
9.1k
views
strange issues with absent EOF markers in BAM files
samtools
picard-tools
bam
eof
7.5 years ago by
abascalfederico
★ 1.2k
3
votes
5
replies
9.1k
views
Using 'blastn' to do a remote search on NCBI BLAST against the nt collection database
blast
shell
unix
linux
5.8 years ago by
maciwuk
• 0
1
vote
6
replies
9.1k
views
Deseq2 : Filtering low counts before per sample
Deseq2
threshold-seq
5.0 years ago by
Cdk
• 0
2
votes
8
replies
9.1k
views
Plotting different gene ontology categories in a barplot
HI
Gene ontology
R
updated 16 months ago by
zx8754
11k • written 2.8 years ago by
aradhana
• 0
11
votes
29
replies
9.1k
views
SummarizedExperiment nrow differs from ncol
DESeq2
SummarizedExperiment
updated 2.1 years ago by
Ram
41k • written 9.5 years ago by
Parham
★ 1.6k
5
votes
11
replies
9.1k
views
R- Kruskal-Wallis test on multiple columns at once
R
statistics
test
kruskal-Wallis
R-statistics
4.3 years ago by
mafernandez
• 0
2
votes
12
replies
9.0k
views
8 follow
michigan imputation server
conversion
michigan imputation server
updated 2.0 years ago by
Fazil
• 0 • written 5.8 years ago by
Teresa
▴ 20
3
votes
8
replies
9.0k
views
topTable in limma
limma
toptable
6.1 years ago by
AHW
▴ 90
0
votes
11
replies
9.0k
views
Error in installation R package
R
updated 7.2 years ago by
Biostar
20 • written 7.3 years ago by
niutster
▴ 110
4
votes
11
replies
9.0k
views
Correct way to calculate VAF (Variant allele fraction) from a VCF file
VCF
snp
15 months ago by
prasundutta87
▴ 660
3
votes
8
replies
8.9k
views
DiffBind: Error in `.rowNamesDF<-`(x, value = value) : invalid 'row.names' length
R
DiffBind
ChIP-Seq
4.7 years ago by
msimmer92
▴ 300
7
votes
8
replies
8.9k
views
Removing rRNA and tRNA sequences using GTF files
RNA-Seq
7.3 years ago by
pixie@bioinfo
★ 1.5k
3
votes
8
replies
8.8k
views
Quantile normalizing prior to or after TPM scaling?
RNAseq
normalization
updated 9 months ago by
Kevin Blighe
86k • written 6.0 years ago by
mforde84
★ 1.4k
4
votes
1
reply
8.8k
views
Need help with heatmaps in R, how to draw select genes or selected pathway??
RNA-Seq
DESEQ2
R
heatmap
ontology
updated 7.2 years ago by
Biostar
20 • written 7.2 years ago by
marina.kimyr
▴ 20
0
votes
4
replies
8.8k
views
How to install PLINK on linux/Mac-OS
genome
3.1 years ago by
giusdalt95
▴ 10
10
votes
11
replies
8.8k
views
How to adjust my manhattan plot to look better?
qqman
manhattan
R
updated 18 months ago by
Ram
41k • written 8.7 years ago by
SheelS
▴ 40
3
votes
4
replies
8.8k
views
Design Pcr Primers To Uniquely Identify A Bacterial Strain
bacteria
pcr
updated 10.1 years ago by
Biostar
20 • written 10.2 years ago by
Eric Normandeau
11k
1
vote
2
replies
8.7k
views
Problem in merging 1000G and cases in Plink
merge
duplicate snp
plink
triallelic
1000G
7.2 years ago by
fatima
▴ 20
3
votes
4
replies
8.7k
views
how to filter vcf file based on sample DP? vcf tools does not work
vcf-filtering
sample DP
6.7 years ago by
Ana
▴ 200
3
votes
7
replies
8.7k
views
6 follow
remote blast requires installation of taxdb database
blast
updated 4.5 years ago by
Varshney
▴ 20 • written 6.1 years ago by
hfan22
▴ 40
7
votes
8
replies
8.7k
views
Determining read count
trimmomatic
rna-seq
trinity
updated 3 months ago by
Ram
41k • written 7.6 years ago by
nikelle.petrillo
▴ 110
2
votes
7
replies
8.7k
views
How to annotate TTS or TES
ChIP-Seq
TES
annotation
6.8 years ago by
Lila M
★ 1.2k
1
vote
2
replies
8.6k
views
Install Plink V1.07 on Mac
software error
7.3 years ago by
xaviera417
• 0
0
votes
4
replies
8.6k
views
ITCN 1.6 ImageJ Plugin
software error
updated 6.1 years ago by
Biostar
20 • written 7.1 years ago by
verma
▴ 30
5
votes
12
replies
8.6k
views
ADMIXTURE: "Invalid chromosome code. Use integers!"
admixture
genome
6.8 years ago by
beneficii
▴ 60
13
votes
13
replies
8.6k
views
How to do pca plot from .eigenval and .eigenvec files from Plink in R.
R
SNP
updated 5.7 years ago by
Devon Ryan
104k • written 5.7 years ago by
amitgourav.ghosh12
▴ 70
1
vote
3
replies
8.6k
views
Htseq Count Finding No Feature
htseq
bacteria
gene-expression
10.7 years ago by
joaslucas
▴ 90
5
votes
10
replies
8.5k
views
GWAS - approximate odds ratio and standard error
GWAS
imputation
updated 6.1 years ago by
Kevin Blighe
86k • written 6.1 years ago by
alessandrotestori7
▴ 420
2
votes
2
replies
8.5k
views
Plot minor allele frequency distribution in R?
gwas
maf
R
7.5 years ago by
dam4l
▴ 200
3
votes
10
replies
8.5k
views
How to remove outliers using PCA in R?
PCA
R
4.4 years ago by
zhaoliang0302
▴ 50
3
votes
0
replies
8.5k
views
edgeR: how to make contrasts with makeContrasts
ngs
edgeR
makeContrasts
glm
dge
5.1 years ago by
m98
▴ 410
18
votes
4
replies
8.5k
views
How To Find Rna-Seq Data Of Published Papers?
geo
next-gen
RNA-seq
updated 9 months ago by
Ram
41k • written 10.3 years ago by
user
▴ 940
4
votes
16
replies
8.5k
views
STAR - genome indexes generation, genome file not created
RNA-Seq
star
updated 4.2 years ago by
Biostar
20 • written 7.0 years ago by
lu.ne
▴ 70
2
votes
3
replies
8.4k
views
what is the detailed information of .amb .ann .bwt .pac .sa files generated by the BWA aligner?
alignment
BWA
.ann
.bwt
.sa
updated 5.8 years ago by
WouterDeCoster
47k • written 5.8 years ago by
lffu_0032
▴ 90
2
votes
9
replies
8.4k
views
How to highlight genes on a Manhattan plot
R
gene
SNP
updated 23 months ago by
Ram
41k • written 9.3 years ago by
kyoko777
• 0
3
votes
13
replies
8.4k
views
Actually meaning of log2FoldChange, p-value & padj in DESeq2 results
RNA-Seq
DESeq2
differentially expressed genes
5.1 years ago by
hffqyd
▴ 10
1,000 results • Page
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Recent Votes
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Answer: How to obtain data on the coordinates of the Exon region from UCSC
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