updated 23 days ago by
cwwong13
▴
40
•
written 6.8 years ago by
lessismore
★
1.3k
40
votes
10
replies
43k
views
8 follow
39
votes
24
replies
2.3k
views
10 follow
38
votes
12
replies
31k
views
9 follow
updated 5 days ago by
alanh
▴
170
•
written 7.1 years ago by
jonessara770
▴
240
29
votes
28
replies
35k
views
11 follow
updated 20 days ago by
thomas.heigl.ibk
•
0
•
written 12.8 years ago by
Bioscientist
★
1.7k
22
votes
15
replies
10k
views
12 follow
updated 6 hours ago by
Thanujay S
•
0
•
written 12.5 years ago by
woemler
▴
170
19
votes
10
replies
7.3k
views
7 follow
19
votes
11
replies
14k
views
10 follow
16
votes
12
replies
7.5k
views
10 follow
14
votes
2
replies
7.1k
views
updated 28 days ago by
Lissa Cruz Saavedra
•
0
•
written 7.3 years ago by
Rox
★
1.4k
13
votes
18
replies
6.2k
views
9 follow
updated 1 day ago by
Dunois
★
2.5k
•
written 3.2 years ago by
chiachoong_leong93
▴
20
13
votes
14
replies
1.0k
views
updated 15 days ago by
t.montserrat.ayuso
▴
40
•
written 24 days ago by
carolofharvest
▴
40
11
votes
3
replies
378
views
updated 15 days ago by
b.contreras.moreira
▴
200
•
written 15 days ago by
ijarne
•
0
10
votes
6
replies
10k
views
6 follow
updated 27 days ago by
Antonio R. Franco
★
5.1k
•
written 6.1 years ago by
williamsbrian5064
▴
520
10
votes
16
replies
17k
views
7 follow
updated 16 days ago by
Pierre Lindenbaum
162k
•
written 5.8 years ago by
mostafarafiepour
▴
180
10
votes
14
replies
847
views
6 follow
updated 15 days ago by
GenoMax
142k
•
written 21 days ago by
nicole.kavanagh
•
0
9
votes
7
replies
6.4k
views
6 follow
9
votes
7
replies
7.2k
views
updated 12 days ago by
Ruqaiya
•
0
•
written 5.8 years ago by
xiaozhongzhiping
▴
20
9
votes
13
replies
4.8k
views
updated 12 days ago by
analyst
▴
50
•
written 6.4 years ago by
David_emir
▴
490
8
votes
16
replies
1.2k
views
8
votes
8
replies
798
views
8
votes
5
replies
6.7k
views
7
votes
16
replies
998
views
24 days ago by
Ruqaiya
•
0
7
votes
7
replies
6.0k
views
6 follow
updated 27 days ago by
rohitsatyam102
▴
870
•
written 6.2 years ago by
smallfish
▴
10
7
votes
2
replies
343
views
updated 29 days ago by
geneontologyhelp
▴
410
•
written 4 weeks ago by
catherine.teyssier
•
0
7
votes
3
replies
13k
views
updated 3 hours ago by
Akash D
▴
40
•
written 6.5 years ago by
rob.costa1234
▴
310
7
votes
14
replies
2.9k
views
6 follow
6
votes
7
replies
426
views
10 days ago by
sansan_96
▴
90
6
votes
2
replies
265
views
updated 13 days ago by
Gordon Smyth
★
7.2k
•
written 13 days ago by
gBioStar5
▴
10
6
votes
5
replies
1.7k
views
8 days ago by
Arton
▴
10
6
votes
5
replies
2.3k
views
6
votes
6
replies
1.9k
views
6
votes
4
replies
13k
views
6
votes
4
replies
384
views
5
votes
6
replies
643
views
5
votes
5
replies
375
views
updated 20 days ago by
atharvakarkare14
▴
40
•
written 21 days ago by
Begonia_pavonina
▴
150
5
votes
7
replies
550
views
5
votes
4
replies
5.0k
views
5
votes
4
replies
745
views
29 days ago by
kirillkirilenko
▴
40
5
votes
3
replies
167
views
updated 20 hours ago by
GenoMax
142k
•
written 20 hours ago by
Christopher
▴
10
5
votes
2
replies
456
views
updated 27 days ago by
shalespringer
▴
10
•
written 3 months ago by
Phenylananin
▴
20
5
votes
5
replies
363
views
5
votes
3
replies
348
views
6 follow
updated 23 days ago by
Lluís R.
★
1.2k
•
written 23 days ago by
이민경[학생](대학원 융합의과학과)
•
0
5
votes
2
replies
360
views
4
votes
5
replies
478
views
4
votes
7
replies
650
views
23 days ago by
e.r.zakiev
▴
210
4
votes
2
replies
297
views
4
votes
6
replies
3.9k
views
updated 23 days ago by
Andres
▴
20
•
written 9.7 years ago by
hermathena
▴
40
4
votes
11
replies
929
views
4
votes
7
replies
636
views
4
votes
11
replies
924
views
Recent Votes
Recent Locations •
All
France, 2 minutes ago
Germany, 4 minutes ago
Spain, 5 minutes ago
Germany, 6 minutes ago
United States, 6 minutes ago
Poland, 10 minutes ago
moon, 11 minutes ago
Recent Awards •
All
Popular Question to
adarsh_pp
▴
40
Popular Question to
liyong
▴
80
Popular Question to
Shicheng Guo
★
9.4k
Popular Question to
reza
▴
300
Popular Question to
mhale
▴
20
Recent Replies
Comment: Is it possible to run CibersortX with a very small number of samples?
by
Aspire
▴
330
Thanks. I have checked that all files are tab delimited, with the first column named Gene_Symbols, with capitalized gene symbols, and no qu…
Answer: samtools write-index
by
aw7
▴
300
Someone, presumably you, opened an [issue][1] for the same problem. The answer was:
> This problem should be fixed in htslib 1.20 (incl…
Answer: How do we do quantification using stringtie merge option for all the merged samp
by
i.sudbery
19k
If you are asking StringTie to estimate expression, then you need to provide it with BAM or CRAM files of the original reads, not a stringt…
Answer: How to interpret this plotMDS of three disease clusters?
by
i.sudbery
19k
> 1) How should I interpret this, can I say that there are practically no differences or outliers?
You can say that the inter-group vari…
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
by
emmanouil.a
▴
120
personaly I see the workstations in long-term ... maybe today you are running only scRNA but having a good workstation tomorrow you can als…
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
by
i.sudbery
19k
It very much depends on whether the OP does want/need to do the CellRanger runs locally or not. Doesn't really matter if its only occasion…
Comment: log2 fold change in RNA-seq analysis
by
Mensur Dlakic
★
27k
Everything is already explained on this page, just read everything already written above. Specifically, [**this comment**][1].
[1]: htt…
Comment: log2 fold change in RNA-seq analysis
by
May Ling
•
0
Good day everyone,
Sorry I found a bit confusing and would appreciate if I could clarify on the calculation. I am using DESeq. My desire…
Answer: GWAS Phenotypes
by
韩雨
•
0
In my opinion, the basis of the question is to solve whether the phenotype is regulated by genetics.
In the aspect of genetic, the estima…
Answer: Classic threshold for log2 fold change in RNA-seq experiment
by
May Ling
•
0
Good day everyone,
Sorry I found a bit confusing and would appreciate if I could clarify on the calculation. I am using DESeq. My desire…
Comment: some error in building kraken2 database
by
ahmet
•
0
Were you able to fix this issue? I'm also trying to add external species to krakendb
Comment: Z score
by
ATpoint
82k
logFCs are a bit difficult to cluster I think, because fold changes without stats attached to it are meaningless. They can be very big, due…
Comment: Z score
by
Akash D
▴
40
Ok. However, if i perform it on log2FC, there wont be any control samples visible in my heatmap.
Your answer is perfect.
Comment: Z score
by
ATpoint
82k
You can apply Z-scores on whatever you want, but it must make sense and depends on what you want to do. What is the context? See for exampl…
Traffic: 2202 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6