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460 results • Page 3 of 10
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14
votes
16
replies
4.9k
views
8 follow
Forum: Yet Another Programming Language
Rust Julia
updated 11 months ago by 43k • written 6.8 years ago by 9.7k
13
votes
7
replies
1.3k
views
Forum: Feedback for my python package to combine results from multiple classifiers
annotation protein python machine-learning
updated 10 months ago by 43k • written 3.7 years ago by ▴ 110
13
votes
7
replies
9.4k
views
Forum: The struggle between fastq and fastq.gz, compressed v/s uncompressed file formats
fastq
updated 11 months ago by 43k • written 6.8 years ago by 5.8k
13
votes
11
replies
4.7k
views
Forum: Anyone using Ubuntu on Windows (WSL)?
ubuntu wsl
updated 11 months ago by 43k • written 5.8 years ago by ▴ 250
13
votes
18
replies
3.2k
views
6 follow
Forum: Bioinformatics independent study group
Proteomic RNA-Seq Genomic
updated 11 months ago by 43k • written 6.7 years ago by ★ 1.3k
13
votes
6
replies
1.2k
views
Forum: To Cloud or Not to Cloud - Privacy implications of genetic data sharing
security diagnostics DNA-Seq
updated 11 months ago by 43k • written 4.8 years ago by 11k
13
votes
4
replies
1.3k
views
Forum: The shortcoming of shiny app in building webserver
R shiny webserver
updated 11 months ago by 43k • written 4.6 years ago by ▴ 120
12
votes
14
replies
2.4k
views
8 follow
Forum: Recovering bam files after unknown deletion in the storage
photorec bam sequencing
written 4.9 years ago by ▴ 70
12
votes
4
replies
2.0k
views
Forum: Update: CRISPR off-target effects causing unexpected mutations - good science or media hype?
off-target CRISPR
updated 11 months ago by 43k • written 6.9 years ago by ★ 1.7k
12
votes
4
replies
1.6k
views
Forum: Bioinformatics and biotechnology market in future.
genome next-gen
updated 11 months ago by 43k • written 4.7 years ago by • 0
12
votes
5
replies
2.6k
views
Forum: We Need Your Input! Help Get Information For The Informatics Community And Get A Free Gift Card!
algorithm ngs
updated 10 months ago by 43k • written 10.9 years ago by ▴ 30
12
votes
12
replies
1.4k
views
7 follow
Forum: Who qualify as a world class bioinformatician as seen in job ads
world-class bioinformatician qualification
updated 10 months ago by 43k • written 4.1 years ago by • 0
12
votes
7
replies
7.1k
views
Forum: Differences between SMART-seq2, SMART-seq3, and 10x
cell smartseq UMIs single 10x
updated 4 weeks ago by ★ 5.9k • written 2.6 years ago by ▴ 70
12
votes
0
replies
1.9k
views
Forum: Free Bioinformatics Courses(Curriculum)
ossu course Curriculum
updated 10 months ago by 43k • written 4.5 years ago by ★ 1.3k
12
votes
12
replies
3.0k
views
Forum: Programming interview via Skype
programming-test interview
updated 11 months ago by 43k • written 5.9 years ago by ▴ 50
12
votes
2
replies
2.9k
views
Forum: List of genome annotation tools (>140)
gene genome
updated 11 months ago by 43k • written 4.7 years ago by 8.5k
11
votes
9
replies
2.4k
views
7 follow
Forum: Feature Selection and Dimensionality Reduction in 10X scRNA-seq data
software-error pca scRNA-seq
updated 11 months ago by 43k • written 4.3 years ago by 82k
11
votes
9
replies
2.3k
views
Forum: Survey: help define Gencode and NCBI primary transcripts
refseq ensembl gencode ncbi transcript
updated 11 months ago by 43k • written 6.1 years ago by 23k
11
votes
5
replies
4.8k
views
Forum: Bioinformatics Workstation Suggestions
RNA-Seq next-gen workstation
updated 11 months ago by 43k • written 4.9 years ago by ▴ 110
11
votes
7
replies
6.6k
views
Forum: Using Graphics Processing Units (GPUs) in bioinformatics
algorithm GPU
updated 11 months ago by 43k • written 4.7 years ago by ▴ 310
11
votes
8
replies
1.7k
views
Forum: Bioinformatics cores pricing model
pricing-models core Bioinformatics-services
updated 11 months ago by 43k • written 5.1 years ago by ▴ 160
11
votes
5
replies
1.5k
views
Forum: What bioinformatic training?
training RNA-Seq illumina
updated 11 months ago by 43k • written 4.9 years ago by ▴ 150
11
votes
5
replies
6.4k
views
Forum: Slurm, Son of Grid Engine, Mesos, and Hadoop YARN vs HTCondor and Torque
PBS HPC SDSC Torque
updated 11 months ago by 43k • written 5.7 years ago by ★ 9.4k
11
votes
13
replies
4.5k
views
6 follow
Forum: NGS Data storage solutions for small organisations or big labs
big-data HTS storage NGS metagenomics
updated 11 months ago by 43k • written 4.9 years ago by ▴ 830
11
votes
8
replies
1.4k
views
6 follow
Forum: How to write a review article in bioinformatics
article review
updated 8 months ago by 43k • written 8 months ago by ▴ 10
11
votes
6
replies
1.5k
views
Forum: Posting a preprint paper on biostars.com
preprint
updated 11 months ago by 43k • written 5.5 years ago by ▴ 760
10
votes
7
replies
2.2k
views
Forum: How to learn bioinformatics?
learning
updated 3 months ago by ★ 1.3k • written 23 months ago by ▴ 20
10
votes
10
replies
1.7k
views
Forum: Doctor looking fertility for a collaborator for text mining on pubmed
text-mining fertility pubmed
updated 11 months ago by 43k • written 6.4 years ago by • 0
10
votes
8
replies
3.0k
views
6 follow
Forum: Cancer research for computer science student
cancer research computer-science
updated 6 months ago by • 0 • written 6.5 years ago by ▴ 70
10
votes
6
replies
1.3k
views
6 follow
Forum: Pros and cons to do biomedical research in pharmaceutical company
industry career academia
updated 10 months ago by 43k • written 4.2 years ago by ★ 9.4k
10
votes
7
replies
2.0k
views
Forum: Is trimming always better?
RNA-Seq QC trimmomatic trimming
updated 11 months ago by 43k • written 4.8 years ago by ▴ 330
10
votes
4
replies
5.8k
views
Forum: Bioinformatics: Which language should I learn
programming
updated 11 months ago by 43k • written 5.0 years ago by • 0
10
votes
6
replies
2.2k
views
Forum: How to acknowledge in the paper a reference genome that hasn't been published yet?
reference paper
updated 11 months ago by 43k • written 5.7 years ago by ▴ 140
10
votes
11
replies
4.2k
views
7 follow
Forum: What made you interested in Bioinformatics?
career
updated 11 months ago by 43k • written 6.4 years ago by ▴ 990
10
votes
15
replies
2.1k
views
Forum: How should reference genome fasta files be distributed by UCSC?
reference-genome fasta freeze ucsc-genome-browser
updated 11 months ago by 22k • written 14 months ago by ★ 1.6k
9
votes
10
replies
17k
views
8 follow
Forum: Open Source Bioinformatics projects for beginners
Open-Source Beginners
updated 12 weeks ago by • 0 • written 6.3 years ago by ▴ 40
9
votes
1
reply
7.3k
views
Forum: Master in statistics or bioinformatics
masters career statistics
updated 10 months ago by 43k • written 10.0 years ago by ▴ 50
9
votes
3
replies
3.2k
views
Forum: Why doesn't Swift have an active bioinformatics community project like rust-bio, Biogo and BioJulia?
Swift
updated 11 months ago by 43k • written 6.3 years ago by • 0
9
votes
10
replies
1.3k
views
6 follow
Forum: What's more clear, loops or functions?
R
updated 11 months ago by 43k • written 5.6 years ago by ▴ 110
9
votes
8
replies
5.1k
views
Forum: R or python, which one do you prefer in analysing scRNAseq datasets?
R RNA-Seq python
updated 11 months ago by 43k • written 6.0 years ago by • 0
9
votes
6
replies
1.5k
views
Forum: How to start my career in Bioinformatics
career
updated 10 months ago by 43k • written 3.7 years ago by ▴ 10
9
votes
10
replies
1.7k
views
Forum: Brainstorming: applying bioinformatics NOT to public field. Ideas and perspectives
applied-sciences data-analysis
updated 11 months ago by 43k • written 6.1 years ago by ★ 1.3k
9
votes
11
replies
3.2k
views
7 follow
Forum: Fields with biggest demand for bioinformatics?
career
updated 11 months ago by 43k • written 5.3 years ago by ▴ 200
9
votes
14
replies
2.4k
views
Forum: MS Bioinformatics Project
assembly sequencing alignment R SNP
updated 11 months ago by 43k • written 6.1 years ago by ▴ 10
9
votes
6
replies
1.9k
views
6 follow
Forum: GTF files from Ensembl Releases 105 and 106 unsorted
Ensembl bug GTF
updated 7 months ago by 82k • written 17 months ago by ▴ 30
9
votes
6
replies
1.4k
views
Forum: New Aligner Tool - Would you be interested in this ?
ChIP-Seq alignment Assembly next-gen rna-seq
updated 11 months ago by 43k • written 6.1 years ago by ▴ 30
8
votes
7
replies
801
views
6 follow
Forum: Tower Server configuration for NGS data analysis
NGS
updated 9 weeks ago by ▴ 120 • written 12 weeks ago by • 0
8
votes
11
replies
1.8k
views
Forum: What makes a good bionformatics prediction service from the point of user experience?
server prediction-service
updated 11 months ago by 43k • written 6.5 years ago by ▴ 40
8
votes
2
replies
1.8k
views
Forum: Factors to consider when applying to computational biology PhD positions
graduate-school academia
updated 11 months ago by 43k • written 6.9 years ago by ★ 1.1k
8
votes
7
replies
6.4k
views
6 follow
Forum: Bioinformatic or bioinformatics?
spelling
updated 11 months ago by 43k • written 6.6 years ago by ▴ 310
460 results • Page 3 of 10
Recent Votes
Answer: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
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Recent Replies
Comment: NGS forensics: how to know if data is fabricated by i.sudbery 19k
I don't follow your argument for distinguishing between genomic contamination and freud. A data set being bad in terms of genomic contamin…
Comment: What does it mean single base resolution in sequencing? by jinyu ▴ 10
Thank you for your detail and great explanation. I do need more time to understand these. And there is still something compuzzling me. For …
Answer: Is it possible to bulk download files from GEO repository? by atharvakarkare14 ▴ 10
Try using this library [GEOparse][1] [1]: https://github.com/guma44/GEOparse
Answer: How many reads for WGS Sequencing? by Ruqaiya • 0
OK. Problem solved. The problem was from my end. Thank you both for helping !!
Comment: NGS forensics: how to know if data is fabricated by Mensur Dlakic ★ 27k
Appreciate the suggestion, but that ship has sailed and reached the other shore. This happened 10+ years ago. To the best of my knowledge n…
Comment: Figures are disappeared from html report of SnpEff by analyst ▴ 30
Files are not opening in any of the computer (ubuntu/windows). I rereun snpEff annotation but still output html files are having missing im…
Comment: Figures are disappeared from html report of SnpEff by analyst ▴ 30
I reinstalled nodejs: > sudo apt-get install nodejs Its already up to date with version v10.19.0
Answer: NGS forensics: how to know if data is fabricated by Prash ▴ 280
Mensur, if I were you, I'd probably contact the CA directly and check with him whether they have reproduced the works recently. There coul…
Comment: NGS forensics: how to know if data is fabricated by noodle ▴ 560
Working on it - it's actually a bit difficult. Low coverage of ribosomal proteins. Low coverage of housekeeping genes ...I'm trying to find…
Comment: NGS forensics: how to know if data is fabricated by noodle ▴ 560
I'm a bit against pubpeer - have you ever posted there? My gripe with them is that the posts are heavily moderated and EDITED to the point…
Comment: NGS forensics: how to know if data is fabricated by Philipp Bayer 8.4k
Thanks Mensur! I'd add that in 9 out of 10 cases, you won't receive a reply to a request for raw data. That's just how scientists are, does…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
I had downloaded the two files in a similar manner actually.
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
ok, i'll try to use fastp. I have only used trimmomatic and cutadapt till now and they dont identify on its own. Except the graph in fastqc…
Comment: How many reads for WGS Sequencing? by Ruqaiya • 0
got it! even if i'm doing the assembly for paired end with both the files do i have set the threshold to 1000bp ?
Comment: NGS forensics: how to know if data is fabricated by Philipp Bayer 8.4k
i've been in our org trying to push such a detector, our use-case is much more limited: I want to make simulated eDNA libraries as real as …
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