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Forum: AddHealth Omics Data Source
AddHealthOmics
updated 11 months ago by 43k • written 5.4 years ago by • 0
9
votes
10
replies
17k
views
8 follow
Forum: Open Source Bioinformatics projects for beginners
Open-Source Beginners
updated 3 months ago by • 0 • written 6.3 years ago by ▴ 40
26
votes
10
replies
4.4k
views
6 follow
Forum: Why not merging?
fastq sequencing
updated 11 months ago by 43k • written 6.8 years ago by 16k
9
votes
10
replies
1.7k
views
Forum: Brainstorming: applying bioinformatics NOT to public field. Ideas and perspectives
applied-sciences data-analysis
updated 11 months ago by 43k • written 6.1 years ago by ★ 1.3k
19
votes
10
replies
1.5k
views
Forum: Pain points using commercial clouds
gpt tinybio
updated 7 months ago by ▴ 70 • written 8 months ago by ▴ 840
15
votes
9
replies
2.2k
views
6 follow
Forum: [Opinion] - What alignment software do you use?
next-gen alignment
updated 11 months ago by 43k • written 6.1 years ago by ▴ 30
2
votes
9
replies
1.4k
views
Forum: 'No code' data manipulation tools for bioinformatics
software
updated 11 months ago by 43k • written 3.9 years ago by • 0
2
votes
9
replies
1.2k
views
Forum: open source projects looking for contributors
open-source
updated 7 months ago by ▴ 70 • written 8 months ago by ▴ 20
7
votes
9
replies
1.4k
views
6 follow
Forum: Mentor for a beginner bioinformatics student
project mentor
6 months ago by UT_FAN ▴ 40
14
votes
9
replies
2.0k
views
Forum: The push toward standardisation
stadardisation
updated 11 months ago by 43k • written 6.5 years ago by 87k
11
votes
9
replies
2.5k
views
7 follow
Forum: Feature Selection and Dimensionality Reduction in 10X scRNA-seq data
software-error pca scRNA-seq
updated 11 months ago by 43k • written 4.3 years ago by 82k
2
votes
9
replies
1.4k
views
Forum: Any good idea for bioinfo final presentation?
R
updated 11 months ago by 43k • written 3.9 years ago by • 0
7
votes
9
replies
1.1k
views
Forum: DEG analysis when not replicates are available
NOISeq RNA-Seq edgeR
updated 11 months ago by 43k • written 4.0 years ago by ★ 5.1k
14
votes
9
replies
5.0k
views
8 follow
Forum: MD into bioinformatics
MD career
updated 11 months ago by 43k • written 5.4 years ago by ▴ 30
8
votes
9
replies
3.7k
views
8 follow
Forum: How can I contribute to the Bioinformatics community as a Software Engineer
software-engineer
updated 11 months ago by 43k • written 5.5 years ago by ★ 1.1k
11
votes
9
replies
2.3k
views
Forum: Survey: help define Gencode and NCBI primary transcripts
refseq ensembl gencode ncbi transcript
updated 11 months ago by 43k • written 6.1 years ago by 23k
7
votes
9
replies
1.6k
views
Forum: 10 Most important topic in Human evolutionary genomics
evolutionary-genomics evolutionary-medicine
updated 11 months ago by 43k • written 5.1 years ago by ▴ 40
19
votes
9
replies
3.7k
views
Forum: How to self-study (get onto) Bioinformatics and Data Analysis for Genomic, for working with real life genomics data?
R genome RNA-Seq Python
updated 11 months ago by 43k • written 5.8 years ago by ▴ 750
1
vote
9
replies
1.7k
views
Forum: Care to speculate? Are Protein Fragments or Entire Protein Sequences useful when classifying via Machine Learning techniques
protein Machine-Learning classification
updated 11 months ago by 43k • written 5.2 years ago by ▴ 80
2
votes
8
replies
1.8k
views
Forum: Wanted: Analysis of RNA-seq data with Bioconductor short course/training (~3 months)
rna-seq
updated 11 months ago by 43k • written 7.0 years ago by ▴ 30
2
votes
8
replies
1.7k
views
7 follow
Forum: Which tools do you miss?
software
updated 10 months ago by 43k • written 3.7 years ago by ▴ 110
16
votes
8
replies
2.1k
views
8 follow
Forum: What are the most important unresolved problems in Bioinformatics?
bioinformatics
updated 10 months ago by 43k • written 7.6 years ago by ★ 2.5k
22
votes
8
replies
1.9k
views
10 follow
Forum: Is there any online course for bioinformatics right now or in the next two or three months?
online-course mooc
updated 11 months ago by 43k • written 4.0 years ago by ▴ 50
11
votes
8
replies
1.4k
views
6 follow
Forum: How to write a review article in bioinformatics
article review
updated 8 months ago by 43k • written 9 months ago by ▴ 10
7
votes
8
replies
2.0k
views
Forum: Would solving many Rosalind problems show your ability for this field in job-wise?
rosalind career
10 months ago by K • 0
10
votes
8
replies
3.1k
views
6 follow
Forum: Cancer research for computer science student
cancer research computer-science
updated 6 months ago by • 0 • written 6.5 years ago by ▴ 70
26
votes
8
replies
1.7k
views
7 follow
Forum: Reasons to refuse to give support
design rna-seq statistics
updated 11 months ago by 43k • written 5.5 years ago by 8.3k
7
votes
8
replies
1.3k
views
Forum: Guidelines / Limits for Shared Bioinformatics Support
Core Shared-Resources Collaboration
updated 11 months ago by 43k • written 4.4 years ago by 8.2k
7
votes
8
replies
727
views
Forum: Bioinformatics career transition
career forum
updated 7 weeks ago by ★ 16k • written 7 weeks ago by ▴ 20
5
votes
8
replies
2.0k
views
7 follow
Forum: Ranking of Bioinformatics tools & resources by the number of users
bioinformatics-tools
updated 11 months ago by 43k • written 5.7 years ago by ▴ 40
11
votes
8
replies
1.7k
views
Forum: Bioinformatics cores pricing model
pricing-models core Bioinformatics-services
updated 11 months ago by 43k • written 5.1 years ago by ▴ 160
1
vote
8
replies
1.9k
views
Forum: Statistics graduate wants to do some bioinformatics analysis
next-gen R statistics
updated 11 months ago by 43k • written 6.6 years ago by • 0
2
votes
8
replies
1.5k
views
Forum: Learning community for newbies
python
updated 11 months ago by 43k • written 6.1 years ago by • 0
1
vote
8
replies
2.1k
views
Forum: Memory-driven computing accelerates genomic data processing
HPC
updated 11 months ago by 43k • written 5.3 years ago by 11k
7
votes
8
replies
2.4k
views
Forum: Virus Genome Length and GC Content of SARS-COV-2 causing COVID-19
sequence genome
updated 11 months ago by 43k • written 4.1 years ago by ▴ 30
6
votes
8
replies
3.4k
views
Forum: A hot topic in Bioinformatics 2017
paper
updated 12 months ago by 43k • written 7.1 years ago by ▴ 90
1
vote
8
replies
5.3k
views
Forum: Would you use sci-hub's mirror site?
sci-hub
updated 11 months ago by 43k • written 4.3 years ago by • 0
3
votes
8
replies
3.5k
views
6 follow
Forum: SSD or HHD for genome analysis
hardware genome sequencing
updated 11 months ago by 43k • written 4.6 years ago by ▴ 20
6
votes
8
replies
4.0k
views
6 follow
Forum: Workstation : More RAM or Faster RAM
RAM Configuration workstation
updated 11 months ago by 43k • written 5.6 years ago by ▴ 20
9
votes
8
replies
5.1k
views
Forum: R or python, which one do you prefer in analysing scRNAseq datasets?
R RNA-Seq python
updated 11 months ago by 43k • written 6.0 years ago by • 0
34
votes
8
replies
2.7k
views
9 follow
Forum: Bioinformatician, a jack of all trades, but in the eye of the CV-beholder a master of none? How can your CV reflect the diverse skills that you have …
cv industry career
updated 11 months ago by 43k • written 4.6 years ago by ▴ 300
2
votes
7
replies
1.5k
views
Forum: Theory v Reality
protein DNA polymorphism variation
updated 11 months ago by 43k • written 6.0 years ago by • 0
7
votes
7
replies
1.5k
views
Forum: Bioinformatician who was retaliated against after reporting discriminatory harassment - Please help me navigate getting out of the situation I'm in
Career advice
updated 20 days ago by ★ 2.5k • written 21 days ago by • 0
2
votes
7
replies
1.5k
views
Forum: Structural Bioinformatics - how popular
structural-bioinformatics
updated 11 months ago by 43k • written 5.6 years ago by • 0
1
vote
7
replies
1.6k
views
Forum: Best online certificates / masters for Bioinformatics
learning certification courses online-training
updated 11 months ago by 43k • written 4.0 years ago by • 0
5
votes
7
replies
1.8k
views
Forum: Research Bazaar 2018
course workshop
updated 11 months ago by 43k • written 6.4 years ago by 8.4k
11
votes
7
replies
6.6k
views
Forum: Using Graphics Processing Units (GPUs) in bioinformatics
algorithm GPU
updated 11 months ago by 43k • written 4.7 years ago by ▴ 310
25
votes
7
replies
1.9k
views
6 follow
Forum: What Are The Best Bioinformatics Course Materials [2020]
course teaching
updated 11 months ago by 43k • written 3.4 years ago by 8.7k
10
votes
7
replies
2.2k
views
Forum: How to learn bioinformatics?
learning
updated 3 months ago by ★ 1.3k • written 23 months ago by ▴ 20
2
votes
7
replies
1.2k
views
Forum: Future prospects: NGS vs Gene editing (using CRISPR CAS9, AAVs and similar methods)
NGS CRISPR-Cas9
updated 11 months ago by 43k • written 4.6 years ago by ▴ 170
459 results • Page 3 of 10
Recent Votes
DEXSeq multiple time points
How to find the most frequent alternative-splicing event from DEXSEQ data?
Comment: Design matrix Differential expression analysis
UMI-Tools 0.5, now with tools for cell barcoded scRNA-seq
Comment: install.packages("imudata")
Answer: Can I merge Hi-C fastq files from different lanes?
Answer: Interpretation of output from MiXCR TCR sequencing
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Recent Replies
Comment: Design matrix Differential expression analysis by SHN ▴ 40
Got it, thank you for your response. SN
Comment: How to interpret DEXseq results in therms of significance by Sara ▴ 30
Hi, I used write.table(as.data.frame(DEXSeqResults(MyObj)), "Results.tsv", quote=FALSE, sep="\t", dec=".") to save the result but I recei…
Comment: Tissue-specific DEG analysis with DEseq2 by M. ▴ 30
Can I ask what do you exactly mean by same experiment? If you are talking about the same donor and the same procedure, unfortunately, not a…
Comment: install package: package ‘gmwm’ is not available for this version of R by Ram 43k
Find someone with computer skills near you and consult them. From your posts on the forum, it's clear that you need help at a level that we…
Comment: Gene Specific coverage from WGS data by GenoMax 142k
This is not going to work no matter what program you use since the chromosome identifiers in your GTF (`MN908947.3 `) do not match your BA…
Comment: install.packages("imudata") - package ‘imudata’ is not available for this versio by Ram 43k
Read the answers in the post, understand them and try to implement them.
Comment: High Malat-1 expression in single cell data by t.montserrat.ayuso ▴ 10
Just using the normalized expression of Malat1 works.
Comment: Can I merge Hi-C fastq files from different lanes? by Winter • 0
Awesome, thank you for the concise and straight-forward answer!
Comment: error in R code by ATpoint 82k
Look, before you keep posting these sorts of questions and might gross of users, please read and follow https://www.biostars.org/p/357878/ …
Comment: Gene Specific coverage from WGS data by 1769mkc ★ 1.2k
"Also if is there any other quick way to find gene specific coverage" can you give some example so that its bit more clear what do you mean…
Answer: Tissue-specific DEG analysis with DEseq2 by ATpoint 82k
I assume that all data are from the same experiment, without batch effects and can thus be quantitiatively compared: Many ways to do thi…
Comment: install.packages("imudata") - package ‘imudata’ is not available for this versio by snajafy • 0
I am facing the same problem and I don't know how to solve the problem,....
Comment: install.packages("imudata") by zx8754 11k
[How should I deal with "package 'xxx' is not available (for R version x.y.z)" warning?](https://stackoverflow.com/q/25721884/680068)
Answer: install.packages("imudata") by ATpoint 82k
Welcome to this community. Please learn the most important lesson right away which is reading answers and learning from it. Users gave you …
Comment: install.packages("imudata") by marco.barr ▴ 90
You can install from github directly. Many R packages are not present in the CRAN repository or in Bioconductor( from Biocmanager). Also re…
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