41
votes
55
replies
11k
views
6 follow
4
votes
45
replies
7.0k
views
updated 7 months ago by
Ram
41k
•
written 7.4 years ago by
cristina_sabiers
▴
110
19
votes
43
replies
5.0k
views
5.3 years ago by
nazaninhoseinkhan
▴
510
16
votes
38
replies
16k
views
17
votes
37
replies
4.2k
views
updated 4.5 years ago by
Biostar
20
•
written 4.6 years ago by
williamsbrian5064
▴
500
5
votes
35
replies
3.0k
views
updated 4 months ago by
Jordan M Eizenga
▴
410
•
written 5 months ago by
anivlete
•
0
3
votes
32
replies
3.0k
views
4
votes
30
replies
2.0k
views
4
votes
30
replies
2.0k
views
14
votes
30
replies
3.1k
views
8
votes
30
replies
4.5k
views
updated 3.7 years ago by
wm
▴
550
•
written 3.7 years ago by
Researcher
▴
20
7
votes
29
replies
2.2k
views
0
votes
29
replies
2.6k
views
updated 5.5 years ago by
Biostar
20
•
written 5.6 years ago by
nour.hadjz
▴
20
11
votes
29
replies
9.0k
views
2
votes
28
replies
6.7k
views
updated 5.3 years ago by
Ram
41k
•
written 5.5 years ago by
marongiu.luigi
▴
690
12
votes
28
replies
2.4k
views
5.5 years ago by
Za
▴
140
3
votes
27
replies
5.2k
views
7 follow
9
votes
27
replies
7.0k
views
updated 4.9 years ago by
ojelizodun
•
0
•
written 5.7 years ago by
nattzy94
▴
50
4
votes
27
replies
4.0k
views
3
votes
26
replies
1.4k
views
6 follow
1
vote
26
replies
5.6k
views
10
votes
25
replies
3.2k
views
8
votes
25
replies
2.6k
views
24
votes
25
replies
7.4k
views
3.3 years ago by
dpc
▴
240
13
votes
24
replies
4.1k
views
0
votes
24
replies
3.2k
views
5
votes
24
replies
8.1k
views
11
votes
24
replies
4.9k
views
4.6 years ago by
williamsbrian5064
▴
500
1
vote
23
replies
1.5k
views
6
votes
23
replies
2.6k
views
5.4 years ago by
Charlie2
▴
50
10
votes
23
replies
2.2k
views
1
vote
23
replies
1.7k
views
11
votes
22
replies
3.6k
views
23
votes
22
replies
45k
views
6 follow
5
votes
22
replies
3.1k
views
5.4 years ago by
Biologist
▴
290
1
vote
22
replies
3.1k
views
updated 5.0 years ago by
Kevin Blighe
86k
•
written 5.0 years ago by
carolgalah
•
0
13
votes
22
replies
10k
views
updated 6.2 years ago by
Biostar
20
•
written 6.4 years ago by
lessismore
★
1.3k
1
vote
22
replies
5.7k
views
5
votes
22
replies
7.1k
views
updated 16 months ago by
Ram
41k
•
written 7.9 years ago by
Shaurya Jauhari
▴
50
4
votes
22
replies
4.1k
views
updated 2.4 years ago by
Lila M
★
1.2k
•
written 2.4 years ago by
smrutimayipanda
▴
20
3
votes
22
replies
2.8k
views
7.3 years ago by
Alireza Ebadi Tabrizi
•
0
0
votes
22
replies
3.1k
views
2
votes
22
replies
1.9k
views
6 follow
2
votes
21
replies
3.7k
views
6
votes
21
replies
2.5k
views
1
vote
21
replies
2.5k
views
3.3 years ago by
randalljellis
▴
90
7
votes
21
replies
2.7k
views
7.1 years ago by
jmsyl.hong
•
0
3
votes
21
replies
3.4k
views
updated 2.6 years ago by
Ram
41k
•
written 4.2 years ago by
mathavanbioinfo
▴
70
0
votes
21
replies
2.3k
views
13 months ago by
sea.joson
▴
10
Recent Votes
Recent Locations •
All
Chile, just now
Barcelona, Spain, 1 minute ago
United States, 6 minutes ago
United States, 13 minutes ago
UK, 16 minutes ago
United States, 17 minutes ago
United States, 18 minutes ago
Recent Awards •
All
Popular Question to
beausoleilmo
▴
560
Commentator to
Brian Bushnell
19k
Popular Question to
Gama313
▴
120
Popular Question to
nanodano
▴
30
Popular Question to
shome
▴
10
Popular Question to
Malachi Griffith
19k
Scholar to
jared.andrews07
★
16k
Recent Replies
Comment: Should I scale all genes in single cell Seurat?
by
synat.keam
▴
80
Thanks, António for your kind and detailed responses. You helped clear my doubt about scaling!
Kind Regards,
Synat
Comment: Using metagenome assembly and binning to identify and mitigate contamination in
by
Brian Bushnell
19k
It's not a silly question! And yes, it can be done. JGI is currently testing various binning tools to try to find the best protocol for t…
Answer: GO categorization
by
geneontologyhelp
▴
270
[We have this in our FAQ][1]. PANTHER version 18.0, which powers the enrichment analysis on our homepage, has [143 species][2] loaded and …
Comment: Problematic fastq files...How can we trust them?
by
blackadder
▴
30
Thanks for the feedback fellas! I agree with the aforementioned!
Comment: Which program, tool, or strategy do you use to visualize genomic rearrangements?
by
cmdcolin
★
3.4k
i collect a large list of tools for visualization, some are specialized for SVs and re-arrangements. you can filter by tag (SV, CNV, compar…
Answer: The number of variations in the pan-genome is reduced compared to the variations
by
Jordan M Eizenga
▴
410
If variants overlap in the genome, `vg deconstruct` will combine them into one locus with multiple alleles. If your input VCF has a lot of …
Answer: How to find node Postion and source(sample) ?
by
Jordan M Eizenga
▴
410
You can use `vg find -P` for this. This command is not really designed to be used frequently throughout the genome (each invocation loads t…
Comment: How Can I move the scattered dots more closer into the center of box ?
by
Brian Bushnell
19k
I would just draw them in by hand where you want them.
Comment: How to identify CG, CHG, or CHH from MeDIP data
by
Tm
★
1.1k
I know that CpG types can be identified using whole genome bisulphite data. But could it be possible using MeDIP data too?
We tried using Q…
Comment: Problematic fastq files...How can we trust them?
by
Brian Bushnell
19k
I'd have to agree there... while you can generally recover a fastq to the point that it is spec-compliant, you don't know how or why the f…
Answer: Finding human .vcf files online to download
by
cmdcolin
★
3.4k
----------
some common ones include
1000 genomes vcf (large, multi-sample) http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/
…
Comment: GO categorization
by
m.habib
•
0
Thanks Istvan for your reply. I think these programs will do the same as Trinotate. Trinotate searches against numerous databases and gener…
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
by
jv
★
1.2k
I wonder if using cell hashing, which would allow pooling of cells from multiple samples before droplet formation, could improve things her…
Comment: Where Can I Find The Basepair Positions Of Chromosome Bands?
by
Malachi Griffith
19k
And the hg38 version can be found here:
https://hgdownload.soe.ucsc.edu/goldenPath/hg38/database/cytoBand.txt.gz
And for convenience, upda…
Answer: How Can I move the scattered dots more closer into the center of box ?
by
Trivas
★
1.5k
You added a position dodge on your boxplot but not on your points.
Traffic: 1374 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6