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Answer: How to use biomart on R to convert Ensembl Gene IDs to Symbols?
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Hi Amr - Please look through threads such as [Conversion of Gene Name to Ensembl ID][1] and others that are already fully discussed.
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This function does not do any filtering at all. Please show code, this is mandatory for any question asked here as one cannot read minds or…
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Googling the exact title yields:
https://stackoverflow.com/questions/28543517/how-can-i-convert-ensembl-id-to-gene-symbol-in-r
https://st…
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Just a guess, but count how many have 0 counts in all samples before and after running that function.
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Thanks for all the suggestions. I created an issue but, unfortunately, was not answered.
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You could make a volcano plot of all the genes in your DEG and highlight the one that you are interested in. Although you will be only usin…
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Yeah, I know it can be written with:
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If you want multithreaded I/O the command-line is a pretty annoying (since you're running a tool within gridss, not the whole pipeline): yo…
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Thank you so much! Will try to run the analysis with the file and check it! Thanks again!!
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As long as the file is not empty it should be good.
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