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460 results • Page
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Votes
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69
votes
39
replies
4.6k
views
14 follow
Forum:
Preparation for Bioinformatics.SE closing
meta
biostars
updated 11 months ago by
Ram
43k • written 6.9 years ago by
John
13k
11
votes
13
replies
4.5k
views
6 follow
Forum:
NGS Data storage solutions for small organisations or big labs
big-data
HTS
storage
NGS
metagenomics
updated 11 months ago by
Ram
43k • written 4.9 years ago by
bioinfo
▴ 830
18
votes
7
replies
4.5k
views
Forum:
Review of the CIGAR string format
alignment
updated 11 months ago by
Ram
43k • written 5.5 years ago by
Juke34
8.6k
26
votes
10
replies
4.4k
views
6 follow
Forum:
Why not merging?
fastq
sequencing
updated 11 months ago by
Ram
43k • written 6.8 years ago by
finswimmer
16k
47
votes
30
replies
4.3k
views
10 follow
Forum:
Bioinformatics software distribution
software
updated 11 months ago by
Ram
43k • written 7.2 years ago by
Petr Ponomarenko
★ 2.8k
15
votes
6
replies
4.3k
views
Forum:
Which database software is better for bioinformatics web development? MySQL or MongoDB?
database
mysql
mongodb
software
updated 11 months ago by
Ram
43k • written 5.6 years ago by
mcclintock
▴ 10
73
votes
14
replies
4.3k
views
12 follow
Forum:
Things you wish you knew when entering the bioinformatics field
pitfalls
advice
updated 10 months ago by
Ram
43k • written 3.6 years ago by
jared.andrews07
★ 16k
10
votes
11
replies
4.2k
views
7 follow
Forum:
What made you interested in Bioinformatics?
career
updated 11 months ago by
Ram
43k • written 6.4 years ago by
Hussain Ather
▴ 990
33
votes
23
replies
4.2k
views
8 follow
Forum:
Is there a file format better suited for the era of pangenomics than the .vcf? What are its attributes?
VCF
file-format
genomics
updated 10 months ago by
Jeremy Leipzig
22k • written 10 months ago by
LauferVA
4.2k
40
votes
23
replies
4.2k
views
12 follow
Forum:
Why learn programming in bioinformatics?
Programming
updated 11 months ago by
Ram
43k • written 5.7 years ago by
joselu
▴ 110
15
votes
13
replies
4.1k
views
8 follow
Forum:
Does a PhD or work experience set you up better to do bioinformatics work in industry?
advice
industry
phd
updated 3 months ago by
benformatics
3.9k • written 18 months ago by
buhbs
▴ 30
36
votes
39
replies
4.1k
views
11 follow
Forum:
Survey/Vote: If you could double the speed of any three commandline tools, which three would they be?
blast
RNA-Seq
alignment
next-gen-sequencing
updated 11 months ago by
Ram
43k • written 6.5 years ago by
dhbradshaw
▴ 130
56
votes
19
replies
4.1k
views
9 follow
Forum:
How to apply for a job
resume
cover-letter
application
CV
updated 11 months ago by
Ram
43k • written 6.8 years ago by
Emily
23k
37
votes
16
replies
4.0k
views
9 follow
Forum:
Sanger sequencing is no longer the gold standard?
Sanger
NGS
updated 11 months ago by
Ram
43k • written 6.5 years ago by
lamteva.vera
▴ 220
6
votes
8
replies
4.0k
views
6 follow
Forum:
Workstation : More RAM or Faster RAM
RAM
Configuration
workstation
updated 11 months ago by
Ram
43k • written 5.6 years ago by
venuraherath
▴ 20
0
votes
3
replies
3.9k
views
10 follow
Forum:
Discussion question: Cutoff for SNP phylogeny
Phylogenetics
SNP
written 17 months ago by
SushiRoll
▴ 120
30
votes
13
replies
3.7k
views
11 follow
Forum:
what is your daily must see bioinformatics web site?
learn
technology
updated 10 months ago by
Ram
43k • written 9.6 years ago by
Medhat
9.7k
25
votes
11
replies
3.7k
views
6 follow
Forum:
Site Use Guidelines
meta
biostars
Guidelines
updated 10 days ago by
Ram
43k • written 14.6 years ago by
Istvan Albert
100k
19
votes
9
replies
3.7k
views
Forum:
How to self-study (get onto) Bioinformatics and Data Analysis for Genomic, for working with real life genomics data?
R
genome
RNA-Seq
Python
updated 11 months ago by
Ram
43k • written 5.8 years ago by
WUSCHEL
▴ 750
8
votes
9
replies
3.7k
views
8 follow
Forum:
How can I contribute to the Bioinformatics community as a Software Engineer
software-engineer
updated 11 months ago by
Ram
43k • written 5.5 years ago by
Chen Sun
★ 1.1k
0
votes
3
replies
3.6k
views
Forum:
How to know that our trinity denovo assembly is good or not?
Assembly
updated 11 months ago by
Ram
43k • written 5.4 years ago by
ashokkumar.mb
• 0
21
votes
12
replies
3.6k
views
Forum:
How to Use Biostars Part-3: Formatting Text and Using GitHub Gists
meta
how-to
documentation
3 months ago by
Ram
43k
4
votes
0
replies
3.5k
views
Forum:
How can unique molecular identifiers (UMIs) help to reduce quantitative biases?
NGS
Variant-Calling
Unique-Molecular-Identifier
updated 11 months ago by
Ram
43k • written 4.9 years ago by
David Langenberger
11k
3
votes
8
replies
3.5k
views
6 follow
Forum:
SSD or HHD for genome analysis
hardware
genome
sequencing
updated 11 months ago by
Ram
43k • written 4.6 years ago by
Neil
▴ 20
19
votes
6
replies
3.5k
views
Forum:
ngs vs microarray
microarray
ngs
updated 11 months ago by
Ram
43k • written 5.8 years ago by
au.rinki.bio
▴ 20
6
votes
8
replies
3.4k
views
Forum:
A hot topic in Bioinformatics 2017
paper
updated 11 months ago by
Ram
43k • written 7.1 years ago by
XBria
▴ 90
22
votes
11
replies
3.3k
views
Forum:
ExpressionSet in the age of tidyverse
expressionset
R
bioconductor
updated 11 months ago by
Ram
43k • written 6.0 years ago by
igor
13k
17
votes
14
replies
3.3k
views
Forum:
Asking for feedback on a Python library for computing alignments
alignment
Python
updated 11 months ago by
Alexander
▴ 220 • written 2.3 years ago by
bernhard.liebl
▴ 60
29
votes
18
replies
3.3k
views
7 follow
Forum:
Should I quit PhD program?
education
career
research
phd
updated 11 months ago by
Ram
43k • written 6.0 years ago by
George
▴ 30
9
votes
11
replies
3.3k
views
7 follow
Forum:
Fields with biggest demand for bioinformatics?
career
updated 11 months ago by
Ram
43k • written 5.3 years ago by
BioinformaticsLad
▴ 200
0
votes
2
replies
3.2k
views
Forum:
I’m considering a career transition from software engineering to bioinformatics. Is it a good fit for me?
career
updated 4 months ago by
GenoMax
142k • written 4 months ago by
Mango
▴ 10
13
votes
18
replies
3.2k
views
6 follow
Forum:
Bioinformatics independent study group
Proteomic
RNA-Seq
Genomic
updated 11 months ago by
Ram
43k • written 6.7 years ago by
Leite
★ 1.3k
38
votes
17
replies
3.2k
views
7 follow
Forum:
Why does bioinformatics use a special format like a BAM file instead of a database like SQLite?
sam
bam
samtools
updated 10 months ago by
Ram
43k • written 3.7 years ago by
kojix2
▴ 250
18
votes
2
replies
3.2k
views
Forum:
Scripts on the Web: Bioinformatics Recipes
bioinformatics
updated 11 months ago by
Ram
43k • written 6.1 years ago by
Istvan Albert
100k
9
votes
3
replies
3.2k
views
Forum:
Why doesn't Swift have an active bioinformatics community project like rust-bio, Biogo and BioJulia?
Swift
updated 11 months ago by
Ram
43k • written 6.3 years ago by
stevin
• 0
29
votes
10
replies
3.2k
views
Forum:
How do you perform functional testing for your Bioinformatics tools?
development
testing
bug
reliability
updated 11 months ago by
Ram
43k • written 7.1 years ago by
shenwei356
8.5k
7
votes
6
replies
3.1k
views
Forum:
transition to bioinformatics
career
wet-lab
updated 11 months ago by
Ram
43k • written 5.9 years ago by
ejms
• 0
2
votes
6
replies
3.1k
views
Forum:
RIP CentOS, CentOS 8 to be EOL'd in 2021
centos
linux-distro
os
updated 10 months ago by
Ram
43k • written 3.4 years ago by
5heikki
11k
10
votes
8
replies
3.1k
views
6 follow
Forum:
Cancer research for computer science student
cancer
research
computer-science
updated 6 months ago by
SANDHYA
• 0 • written 6.5 years ago by
mhasa006
▴ 70
64
votes
24
replies
3.0k
views
12 follow
Forum:
How much I must feel useless?
machine-learning
Programming
statistics
updated 11 months ago by
Ram
43k • written 5.6 years ago by
Molecular_genetics
▴ 80
4
votes
6
replies
3.0k
views
Forum:
Looking for advice on making a grad school decision on bioinformatics/computational biology programs
computational-biology
graduate-program
updated 11 months ago by
Ram
43k • written 7.1 years ago by
JQX
▴ 10
3
votes
4
replies
3.0k
views
6 follow
Forum:
Links for forums or discussion groups about machine learning, aging, genomics and artificial intelligence?
genome
updated 11 months ago by
Ram
43k • written 6.2 years ago by
tfhahn
▴ 50
12
votes
12
replies
3.0k
views
Forum:
Programming interview via Skype
programming-test
interview
updated 11 months ago by
Ram
43k • written 5.9 years ago by
padgaus
▴ 50
0
votes
1
reply
3.0k
views
Forum:
Bioinformatics Master thesis
thesis
updated 11 months ago by
Ram
43k • written 5.3 years ago by
lucas_
▴ 20
12
votes
2
replies
3.0k
views
Forum:
List of genome annotation tools (>140)
gene
genome
updated 11 months ago by
Ram
43k • written 4.7 years ago by
Juke34
8.6k
34
votes
22
replies
2.9k
views
11 follow
Forum:
Have we failed as bioinformatician in this time of COVID-19
Bioinformatician
COVID-19
updated 10 months ago by
Ram
43k • written 4.0 years ago by
heididunst
▴ 10
4
votes
6
replies
2.9k
views
Forum:
NGS Data Storage Best Practices (Clinical)
NGS
clinical
storage
updated 11 months ago by
Ram
43k • written 4.4 years ago by
Robert Sicko
▴ 630
45
votes
19
replies
2.9k
views
9 follow
Forum:
Where and how NGS techniques are heading for the next 5 years?
next-gen
NGS
updated 11 months ago by
Ram
43k • written 6.9 years ago by
lakhujanivijay
5.8k
3
votes
7
replies
2.9k
views
Forum:
Strategies for group submisions to SRA (BioProject)
NCBI
SRA
next-gen
Archive
Core-Facility
updated 11 months ago by
Ram
43k • written 5.5 years ago by
A. Domingues
★ 2.7k
8
votes
6
replies
2.8k
views
Forum:
Demonstrating Exponential Growth In Pre-School
education
written 10.2 years ago by
Asaf
10k
460 results • Page
2 of 10
Recent Votes
Comment: Help with choosing a model species for Augustus for a de novo assembled genome.
A: After read mapping, count exons or genes?
After read mapping, count exons or genes?
Merging a large number of VCF files
A: Merging a large number of VCF files
A: pulling snps from vcf file using ids
pulling snps from vcf file using ids
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Comment: Segmentation error while using a tool
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Hey @Ruqaiya! Can you please give more details on why smalt is opted here? According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA
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Thanujay S
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Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool
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I tried the 2nd option only. I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
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Isn't the download link available above the plot: http://bis.zju.edu.cn/HCL/data/DGE/Adult-Transverse-Colon1_dge.txt.gz
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You need to change this configuration file to point it to the location where the aligner executable can be found. So as an example followi…
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The expression levels do not change but the way that you have parametrized the expression levels does change. The two design matrices give…
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(cross-posted from https://groups.google.com/g/plink2-users/c/Qphx_6BpPII ) You need to use --chr-set, not --allow-extra-chr, to specify…
Answer: Easy way to find out which allele is minor allele from bed file?
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chrchang523
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This question does not make sense. If you care about allele-order "information [being] lost in downstream applications", REF/ALT is the ob…
Answer: visualize GSEA
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I have made some edits in your code basically changing the position of text and commented out the line `data$text_pos <- ifelse(data$NES > …
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Pictures of code are useless. You were told to paste the code and use the 0101 button. Can you explain why you decided not to do that? If…
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In paired end sequencing, every read has a mate, and the flags all together tell you not only what is up with the read you are looking at, …
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